RNA–Protein interactions for RNA: ENSMUST00000110522.9

Trim9-202, Transcript of E3 ubiquitin-protein ligase TRIM9, mousemouse

TSL 1 (best) BASIC

Gene Trim9, Length 4,405 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9-202ENSMUST00000110522 Rhox8Q6VSS7 320 aa20.58■□□□□ 0.88
Trim9-202ENSMUST00000110522 NischQ80TM9 1593 aa19.19■□□□□ 0.66
Trim9-202ENSMUST00000110522 Ccdc136Q3TVA9 1136 aa18.64■□□□□ 0.57
Trim9-202ENSMUST00000110522 Ehmt2Q9Z148 1263 aaKnown RBP18.48■□□□□ 0.55
Trim9-202ENSMUST00000110522 Cngb1E1AZ71 1325 aa18.12■□□□□ 0.49
Trim9-202ENSMUST00000110522 Abcc9P70170 1546 aa18.08■□□□□ 0.48
Trim9-202ENSMUST00000110522 Esf1Q3V1V3 845 aaKnown RBP18.07■□□□□ 0.48
Trim9-202ENSMUST00000110522 Trim41Q5NCC3 630 aa18■□□□□ 0.47
Trim9-202ENSMUST00000110522 Gab3Q8BSM5 595 aa17.98■□□□□ 0.47
Trim9-202ENSMUST00000110522 Rpgrip1Q9EPQ2 1331 aa17.97■□□□□ 0.47
Trim9-202ENSMUST00000110522 Abcc8B2RUS7 1588 aa17.77■□□□□ 0.43
Trim9-202ENSMUST00000110522 Myt1lP97500 1187 aa17.54■□□□□ 0.4
Trim9-202ENSMUST00000110522 Npm2Q80W85 207 aa17.53■□□□□ 0.4
Trim9-202ENSMUST00000110522 Gm35339A0A140LHH9 1649 aa17.52■□□□□ 0.4
Trim9-202ENSMUST00000110522 Zcchc6Q5BLK4 1491 aaKnown RBP17.48■□□□□ 0.39
Trim9-202ENSMUST00000110522 Zeb1Q64318 1117 aa17.47■□□□□ 0.39
Trim9-202ENSMUST00000110522 Ccdc180J3QNE4 1664 aa17.44■□□□□ 0.38
Trim9-202ENSMUST00000110522 HrcG5E8J6 738 aa17.41■□□□□ 0.38
Trim9-202ENSMUST00000110522 Wdr66E9Q743 1299 aa17.33■□□□□ 0.36
Trim9-202ENSMUST00000110522 Acin1Q9JIX8 1338 aaKnown RBP17.32■□□□□ 0.36
Trim9-202ENSMUST00000110522 Rtl1Q7M732 1744 aa17.24■□□□□ 0.35
Trim9-202ENSMUST00000110522 Las1lA2BE28 776 aaKnown RBP17.23■□□□□ 0.35
Trim9-202ENSMUST00000110522 UbtfP25976 765 aaKnown RBP17.21■□□□□ 0.35
Trim9-202ENSMUST00000110522 Il27Q8K3I6 234 aa17.19■□□□□ 0.34
Trim9-202ENSMUST00000110522 Ube2uB1AUC4 352 aa17.17■□□□□ 0.34
Trim9-202ENSMUST00000110522 NefmP08553 848 aa16.91■□□□□ 0.3
Trim9-202ENSMUST00000110522 Ap3b1Q9Z1T1 1105 aa16.84■□□□□ 0.29
Trim9-202ENSMUST00000110522 Rb1cc1Q9ESK9 1588 aa16.83■□□□□ 0.29
Trim9-202ENSMUST00000110522 Chic1Q8CBW7 227 aa16.76■□□□□ 0.27
Trim9-202ENSMUST00000110522 Pcgf6Q99NA9 353 aa16.75■□□□□ 0.27
Trim9-202ENSMUST00000110522 Dcaf1Q80TR8 1506 aa16.73■□□□□ 0.27
Trim9-202ENSMUST00000110522 Ppargc1bQ8VHJ7 1014 aa16.65■□□□□ 0.26
Trim9-202ENSMUST00000110522 Fam50aQ9WV03 339 aaKnown RBP16.63■□□□□ 0.25
Trim9-202ENSMUST00000110522 Mier1Q5UAK0 511 aa16.62■□□□□ 0.25
Trim9-202ENSMUST00000110522 Brd4Q9ESU6 1400 aaKnown RBP16.61■□□□□ 0.25
Trim9-202ENSMUST00000110522 NacadQ5SWP3 1504 aa16.59■□□□□ 0.25
Trim9-202ENSMUST00000110522 Supt5hO55201 1082 aaKnown RBP16.56■□□□□ 0.24
Trim9-202ENSMUST00000110522 Plekhg3Q4VAC9 1341 aa16.55■□□□□ 0.24
Trim9-202ENSMUST00000110522 Cep164Q5DU05 1446 aa16.49■□□□□ 0.23
Trim9-202ENSMUST00000110522 Npm1Q61937 292 aaKnown RBP16.49■□□□□ 0.23
Trim9-202ENSMUST00000110522 Baz1aO88379 1555 aa16.47■□□□□ 0.23
Trim9-202ENSMUST00000110522 Lmod2Q3UHZ5 550 aa16.46■□□□□ 0.22
Trim9-202ENSMUST00000110522 Slc24a1Q91WD8 1130 aa16.45■□□□□ 0.22
Trim9-202ENSMUST00000110522 Kdm5dQ62240 1548 aa16.43■□□□□ 0.22
Trim9-202ENSMUST00000110522 Neurod1Q60867 357 aa16.38■□□□□ 0.21
Trim9-202ENSMUST00000110522 NclP09405 707 aaKnown RBP16.35■□□□□ 0.21
Trim9-202ENSMUST00000110522 TonslQ6NZL6 1363 aa16.34■□□□□ 0.21
Trim9-202ENSMUST00000110522 Cdk11bP24788 784 aaKnown RBP16.34■□□□□ 0.21
Trim9-202ENSMUST00000110522 Nop58Q6DFW4 536 aaKnown RBP16.27■□□□□ 0.2
Trim9-202ENSMUST00000110522 Clip1Q922J3 1391 aa16.25■□□□□ 0.19
Trim9-202ENSMUST00000110522 Eid3Q3V124 375 aa16.25■□□□□ 0.19
Trim9-202ENSMUST00000110522 Ubl4bQ9CQ84 188 aa16.22■□□□□ 0.19
Trim9-202ENSMUST00000110522 Golga3P55937 1487 aa16.18■□□□□ 0.18
Trim9-202ENSMUST00000110522 Rsf1E9PWW9 1441 aaKnown RBP16.16■□□□□ 0.18
Trim9-202ENSMUST00000110522 Stra8P70278 393 aa16.15■□□□□ 0.18
Trim9-202ENSMUST00000110522 Zbtb7cQ8VCZ7 619 aa16.13■□□□□ 0.17
Trim9-202ENSMUST00000110522 Sall2Q9QX96 1004 aa16.09■□□□□ 0.17
Trim9-202ENSMUST00000110522 CenpbP27790 599 aa16.08■□□□□ 0.17
Trim9-202ENSMUST00000110522 Mapk8ip2Q9ERE9 830 aa16.08■□□□□ 0.17
Trim9-202ENSMUST00000110522 ScribQ80U72 1612 aa16.05■□□□□ 0.16
Trim9-202ENSMUST00000110522 Fkbp15Q6P9Q6 1216 aaKnown RBP16.01■□□□□ 0.15
Trim9-202ENSMUST00000110522 ClspnQ80YR7 1315 aa16.01■□□□□ 0.15
Trim9-202ENSMUST00000110522 Ifnlr1Q8CGK5 535 aa15.99■□□□□ 0.15
Trim9-202ENSMUST00000110522 Kif15Q6P9L6 1387 aa15.99■□□□□ 0.15
Trim9-202ENSMUST00000110522 Ccdc88bQ4QRL3 1481 aa15.99■□□□□ 0.15
Trim9-202ENSMUST00000110522 NrdcQ8BHG1 1161 aa15.98■□□□□ 0.15
Trim9-202ENSMUST00000110522 Eif5bQ05D44 1216 aaKnown RBP15.96■□□□□ 0.15
Trim9-202ENSMUST00000110522 Sycp2Q9CUU3 1500 aa15.96■□□□□ 0.15
Trim9-202ENSMUST00000110522 Pelp1Q9DBD5 1123 aaKnown RBP15.96■□□□□ 0.14
Trim9-202ENSMUST00000110522 Os9Q8K2C7 672 aa15.94■□□□□ 0.14
Trim9-202ENSMUST00000110522 Hnrnpul2Q00PI9 745 aaKnown RBP15.92■□□□□ 0.14
Trim9-202ENSMUST00000110522 BlmO88700 1416 aa15.92■□□□□ 0.14
Trim9-202ENSMUST00000110522 Setd5Q5XJV7 1441 aa15.91■□□□□ 0.14
Trim9-202ENSMUST00000110522 Cecr2E9Q2Z1 1453 aa15.91■□□□□ 0.14
Trim9-202ENSMUST00000110522 Chic2Q9D9G3 165 aa15.9■□□□□ 0.14
Trim9-202ENSMUST00000110522 Zbtb4Q5F293 982 aa15.88■□□□□ 0.13
Trim9-202ENSMUST00000110522 Anp32bQ9EST5 272 aaKnown RBP15.82■□□□□ 0.12
Trim9-202ENSMUST00000110522 Tnnt3Q9QZ47 272 aa15.82■□□□□ 0.12
Trim9-202ENSMUST00000110522 Aebp2Q9Z248 504 aaKnown RBP15.78■□□□□ 0.12
Trim9-202ENSMUST00000110522 Crybg2B7ZCC2 1516 aa15.78■□□□□ 0.12
Trim9-202ENSMUST00000110522 CftrP26361 1476 aa15.76■□□□□ 0.11
Trim9-202ENSMUST00000110522 Smarca2Q6DIC0 1577 aa15.75■□□□□ 0.11
Trim9-202ENSMUST00000110522 Ercc6F8VPZ5 1481 aa15.75■□□□□ 0.11
Trim9-202ENSMUST00000110522 Erich6D3Z6S9 713 aa15.72■□□□□ 0.11
Trim9-202ENSMUST00000110522 Eea1Q8BL66 1411 aa15.71■□□□□ 0.11
Trim9-202ENSMUST00000110522 Ccdc18Q640L5 1455 aa15.69■□□□□ 0.1
Trim9-202ENSMUST00000110522 Ccer2J3QPU5 274 aa15.68■□□□□ 0.1
Trim9-202ENSMUST00000110522 Gm38655A0A286YDK6 273 aa15.68■□□□□ 0.1
Trim9-202ENSMUST00000110522 Pds5bQ4VA53 1446 aaKnown RBP15.68■□□□□ 0.1
Trim9-202ENSMUST00000110522 Cep162Q6ZQ06 1403 aa15.66■□□□□ 0.1
Trim9-202ENSMUST00000110522 Synj1Q8CHC4 1574 aa15.64■□□□□ 0.09
Trim9-202ENSMUST00000110522 Fmn1Q05860 1466 aa15.64■□□□□ 0.09
Trim9-202ENSMUST00000110522 Csrnp3P59055 597 aa15.64■□□□□ 0.09
Trim9-202ENSMUST00000110522 Prdm10Q3UTQ7 1184 aa15.62■□□□□ 0.09
Trim9-202ENSMUST00000110522 Anks4bQ8K3X6 423 aa15.61■□□□□ 0.09
Trim9-202ENSMUST00000110522 NeflP08551 543 aa15.58■□□□□ 0.08
Trim9-202ENSMUST00000110522 Arhgap27A2AB59 869 aa15.56■□□□□ 0.08
Trim9-202ENSMUST00000110522 Gm13697A2AK42 830 aa15.5■□□□□ 0.07
Trim9-202ENSMUST00000110522 Atp1b4Q99ME6 356 aa15.49■□□□□ 0.07
Trim9-202ENSMUST00000110522 Rapgef2Q8CHG7 1496 aa15.48■□□□□ 0.07
Retrieved 100 of 22,080 RNA–protein pairs in 76.8 ms