Protein–RNA interactions for Protein: A0A0G2JDE1

Ighv8-12, Immunoglobulin heavy variable V8-12 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv8-12A0A0G2JDE1 Gm25239-201ENSMUST00000174915 86 ntBASIC26.92■■□□□ 1.9
Ighv8-12A0A0G2JDE1 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Ighv8-12A0A0G2JDE1 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Ighv8-12A0A0G2JDE1 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Ighv8-12A0A0G2JDE1 Gm15042-201ENSMUST00000120212 883 ntBASIC23.78■■□□□ 1.4
Ighv8-12A0A0G2JDE1 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
Ighv8-12A0A0G2JDE1 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC23.45■■□□□ 1.35
Ighv8-12A0A0G2JDE1 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Ighv8-12A0A0G2JDE1 Gm15045-201ENSMUST00000117359 883 ntBASIC23.26■■□□□ 1.31
Ighv8-12A0A0G2JDE1 Gm24109-201ENSMUST00000175489 103 ntBASIC23.2■■□□□ 1.3
Ighv8-12A0A0G2JDE1 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Ighv8-12A0A0G2JDE1 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Ighv8-12A0A0G2JDE1 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Ighv8-12A0A0G2JDE1 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Ighv8-12A0A0G2JDE1 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Ighv8-12A0A0G2JDE1 Gm23366-201ENSMUST00000175022 89 ntBASIC22.55■■□□□ 1.2
Ighv8-12A0A0G2JDE1 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC22.45■■□□□ 1.19
Ighv8-12A0A0G2JDE1 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Ighv8-12A0A0G2JDE1 Psd-208ENSMUST00000224556 2034 ntBASIC22.4■■□□□ 1.18
Ighv8-12A0A0G2JDE1 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ighv8-12A0A0G2JDE1 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ighv8-12A0A0G2JDE1 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Ighv8-12A0A0G2JDE1 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Ighv8-12A0A0G2JDE1 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ighv8-12A0A0G2JDE1 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ighv8-12A0A0G2JDE1 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ighv8-12A0A0G2JDE1 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ighv8-12A0A0G2JDE1 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ighv8-12A0A0G2JDE1 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC21.91■■□□□ 1.1
Ighv8-12A0A0G2JDE1 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
Ighv8-12A0A0G2JDE1 AC153911.1-202ENSMUST00000218534 1034 ntBASIC21.81■■□□□ 1.08
Ighv8-12A0A0G2JDE1 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ighv8-12A0A0G2JDE1 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ighv8-12A0A0G2JDE1 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC21.62■■□□□ 1.05
Ighv8-12A0A0G2JDE1 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ighv8-12A0A0G2JDE1 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ighv8-12A0A0G2JDE1 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC21.46■■□□□ 1.03
Ighv8-12A0A0G2JDE1 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC21.32■■□□□ 1
Ighv8-12A0A0G2JDE1 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ighv8-12A0A0G2JDE1 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ighv8-12A0A0G2JDE1 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Ighv8-12A0A0G2JDE1 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC21.25■□□□□ 0.99
Ighv8-12A0A0G2JDE1 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ighv8-12A0A0G2JDE1 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ighv8-12A0A0G2JDE1 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC21.18■□□□□ 0.98
Ighv8-12A0A0G2JDE1 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ighv8-12A0A0G2JDE1 Gm25238-201ENSMUST00000174914 89 ntBASIC21.16■□□□□ 0.98
Ighv8-12A0A0G2JDE1 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ighv8-12A0A0G2JDE1 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ighv8-12A0A0G2JDE1 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ighv8-12A0A0G2JDE1 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Ighv8-12A0A0G2JDE1 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ighv8-12A0A0G2JDE1 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ighv8-12A0A0G2JDE1 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ighv8-12A0A0G2JDE1 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC21■□□□□ 0.95
Ighv8-12A0A0G2JDE1 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ighv8-12A0A0G2JDE1 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ighv8-12A0A0G2JDE1 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ighv8-12A0A0G2JDE1 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Ighv8-12A0A0G2JDE1 Gm27325-201ENSMUST00000175467 74 ntBASIC20.87■□□□□ 0.93
Ighv8-12A0A0G2JDE1 Gm10524-201ENSMUST00000181931 1893 ntBASIC20.85■□□□□ 0.93
Ighv8-12A0A0G2JDE1 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ighv8-12A0A0G2JDE1 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ighv8-12A0A0G2JDE1 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC20.84■□□□□ 0.93
Ighv8-12A0A0G2JDE1 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
Ighv8-12A0A0G2JDE1 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ighv8-12A0A0G2JDE1 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC20.73■□□□□ 0.91
Ighv8-12A0A0G2JDE1 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ighv8-12A0A0G2JDE1 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ighv8-12A0A0G2JDE1 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ighv8-12A0A0G2JDE1 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ighv8-12A0A0G2JDE1 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
Ighv8-12A0A0G2JDE1 Gm42596-201ENSMUST00000196305 1958 ntBASIC20.61■□□□□ 0.89
Ighv8-12A0A0G2JDE1 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Ighv8-12A0A0G2JDE1 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ighv8-12A0A0G2JDE1 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ighv8-12A0A0G2JDE1 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC20.59■□□□□ 0.89
Ighv8-12A0A0G2JDE1 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ighv8-12A0A0G2JDE1 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC20.57■□□□□ 0.88
Ighv8-12A0A0G2JDE1 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ighv8-12A0A0G2JDE1 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ighv8-12A0A0G2JDE1 CT025624.2-201ENSMUST00000223609 1909 ntBASIC20.53■□□□□ 0.88
Ighv8-12A0A0G2JDE1 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ighv8-12A0A0G2JDE1 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Ighv8-12A0A0G2JDE1 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ighv8-12A0A0G2JDE1 Rab21-202ENSMUST00000218831 843 ntBASIC20.36■□□□□ 0.85
Ighv8-12A0A0G2JDE1 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC20.35■□□□□ 0.85
Ighv8-12A0A0G2JDE1 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ighv8-12A0A0G2JDE1 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ighv8-12A0A0G2JDE1 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ighv8-12A0A0G2JDE1 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ighv8-12A0A0G2JDE1 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC20.27■□□□□ 0.84
Ighv8-12A0A0G2JDE1 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ighv8-12A0A0G2JDE1 Gm25262-201ENSMUST00000174934 133 ntBASIC20.2■□□□□ 0.82
Ighv8-12A0A0G2JDE1 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC20.2■□□□□ 0.82
Ighv8-12A0A0G2JDE1 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Ighv8-12A0A0G2JDE1 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Ighv8-12A0A0G2JDE1 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ighv8-12A0A0G2JDE1 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ighv8-12A0A0G2JDE1 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms