Protein–RNA interactions for Protein: E9Q3Z1

B230217C12Rik, RIKEN cDNA B230217C12 gene, mousemouse

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B230217C12RikE9Q3Z1 Gm25239-201ENSMUST00000174915 86 ntBASIC25.89■■□□□ 1.74
B230217C12RikE9Q3Z1 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
B230217C12RikE9Q3Z1 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
B230217C12RikE9Q3Z1 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
B230217C12RikE9Q3Z1 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
B230217C12RikE9Q3Z1 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
B230217C12RikE9Q3Z1 Psd-208ENSMUST00000224556 2034 ntBASIC23.09■■□□□ 1.29
B230217C12RikE9Q3Z1 Gm15042-201ENSMUST00000120212 883 ntBASIC23.09■■□□□ 1.29
B230217C12RikE9Q3Z1 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
B230217C12RikE9Q3Z1 Gm15045-201ENSMUST00000117359 883 ntBASIC22.67■■□□□ 1.22
B230217C12RikE9Q3Z1 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
B230217C12RikE9Q3Z1 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
B230217C12RikE9Q3Z1 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC22.43■■□□□ 1.18
B230217C12RikE9Q3Z1 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
B230217C12RikE9Q3Z1 Gm24109-201ENSMUST00000175489 103 ntBASIC22.23■■□□□ 1.15
B230217C12RikE9Q3Z1 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
B230217C12RikE9Q3Z1 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
B230217C12RikE9Q3Z1 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
B230217C12RikE9Q3Z1 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
B230217C12RikE9Q3Z1 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
B230217C12RikE9Q3Z1 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
B230217C12RikE9Q3Z1 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
B230217C12RikE9Q3Z1 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
B230217C12RikE9Q3Z1 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
B230217C12RikE9Q3Z1 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
B230217C12RikE9Q3Z1 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC21.8■■□□□ 1.08
B230217C12RikE9Q3Z1 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
B230217C12RikE9Q3Z1 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
B230217C12RikE9Q3Z1 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
B230217C12RikE9Q3Z1 Gm23366-201ENSMUST00000175022 89 ntBASIC21.67■■□□□ 1.06
B230217C12RikE9Q3Z1 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
B230217C12RikE9Q3Z1 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC21.6■■□□□ 1.05
B230217C12RikE9Q3Z1 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
B230217C12RikE9Q3Z1 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
B230217C12RikE9Q3Z1 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
B230217C12RikE9Q3Z1 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
B230217C12RikE9Q3Z1 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
B230217C12RikE9Q3Z1 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
B230217C12RikE9Q3Z1 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
B230217C12RikE9Q3Z1 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
B230217C12RikE9Q3Z1 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC21.21■□□□□ 0.99
B230217C12RikE9Q3Z1 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC21.2■□□□□ 0.98
B230217C12RikE9Q3Z1 AC153911.1-202ENSMUST00000218534 1034 ntBASIC21.19■□□□□ 0.98
B230217C12RikE9Q3Z1 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
B230217C12RikE9Q3Z1 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
B230217C12RikE9Q3Z1 Gm10524-201ENSMUST00000181931 1893 ntBASIC21.1■□□□□ 0.97
B230217C12RikE9Q3Z1 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
B230217C12RikE9Q3Z1 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
B230217C12RikE9Q3Z1 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
B230217C12RikE9Q3Z1 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
B230217C12RikE9Q3Z1 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
B230217C12RikE9Q3Z1 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
B230217C12RikE9Q3Z1 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
B230217C12RikE9Q3Z1 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC20.65■□□□□ 0.9
B230217C12RikE9Q3Z1 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
B230217C12RikE9Q3Z1 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
B230217C12RikE9Q3Z1 CT025624.2-201ENSMUST00000223609 1909 ntBASIC20.63■□□□□ 0.89
B230217C12RikE9Q3Z1 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
B230217C12RikE9Q3Z1 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
B230217C12RikE9Q3Z1 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC20.54■□□□□ 0.88
B230217C12RikE9Q3Z1 Gm42596-201ENSMUST00000196305 1958 ntBASIC20.54■□□□□ 0.88
B230217C12RikE9Q3Z1 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
B230217C12RikE9Q3Z1 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
B230217C12RikE9Q3Z1 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
B230217C12RikE9Q3Z1 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
B230217C12RikE9Q3Z1 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
B230217C12RikE9Q3Z1 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
B230217C12RikE9Q3Z1 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
B230217C12RikE9Q3Z1 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC20.35■□□□□ 0.85
B230217C12RikE9Q3Z1 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
B230217C12RikE9Q3Z1 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
B230217C12RikE9Q3Z1 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
B230217C12RikE9Q3Z1 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
B230217C12RikE9Q3Z1 Gm27325-201ENSMUST00000175467 74 ntBASIC20.31■□□□□ 0.84
B230217C12RikE9Q3Z1 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
B230217C12RikE9Q3Z1 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
B230217C12RikE9Q3Z1 Gm25238-201ENSMUST00000174914 89 ntBASIC20.28■□□□□ 0.84
B230217C12RikE9Q3Z1 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
B230217C12RikE9Q3Z1 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
B230217C12RikE9Q3Z1 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
B230217C12RikE9Q3Z1 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
B230217C12RikE9Q3Z1 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
B230217C12RikE9Q3Z1 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
B230217C12RikE9Q3Z1 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC20.18■□□□□ 0.82
B230217C12RikE9Q3Z1 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
B230217C12RikE9Q3Z1 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC20.1■□□□□ 0.81
B230217C12RikE9Q3Z1 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
B230217C12RikE9Q3Z1 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
B230217C12RikE9Q3Z1 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
B230217C12RikE9Q3Z1 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
B230217C12RikE9Q3Z1 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
B230217C12RikE9Q3Z1 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
B230217C12RikE9Q3Z1 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
B230217C12RikE9Q3Z1 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
B230217C12RikE9Q3Z1 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
B230217C12RikE9Q3Z1 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
B230217C12RikE9Q3Z1 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
B230217C12RikE9Q3Z1 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
B230217C12RikE9Q3Z1 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
B230217C12RikE9Q3Z1 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC19.91■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms