Protein–RNA interactions for Protein: A0A0A6YWG2

Ighv1-5, Immunoglobulin heavy variable V1-5 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-5A0A0A6YWG2 Gm25239-201ENSMUST00000174915 86 ntBASIC27.12■■□□□ 1.93
Ighv1-5A0A0A6YWG2 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC25■■□□□ 1.59
Ighv1-5A0A0A6YWG2 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Ighv1-5A0A0A6YWG2 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Ighv1-5A0A0A6YWG2 Gm15042-201ENSMUST00000120212 883 ntBASIC23.89■■□□□ 1.41
Ighv1-5A0A0A6YWG2 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
Ighv1-5A0A0A6YWG2 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Ighv1-5A0A0A6YWG2 Gm24109-201ENSMUST00000175489 103 ntBASIC23.39■■□□□ 1.33
Ighv1-5A0A0A6YWG2 Gm15045-201ENSMUST00000117359 883 ntBASIC23.32■■□□□ 1.32
Ighv1-5A0A0A6YWG2 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Ighv1-5A0A0A6YWG2 Psd-208ENSMUST00000224556 2034 ntBASIC22.94■■□□□ 1.26
Ighv1-5A0A0A6YWG2 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
Ighv1-5A0A0A6YWG2 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Ighv1-5A0A0A6YWG2 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Ighv1-5A0A0A6YWG2 Gm23366-201ENSMUST00000175022 89 ntBASIC22.72■■□□□ 1.23
Ighv1-5A0A0A6YWG2 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ighv1-5A0A0A6YWG2 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ighv1-5A0A0A6YWG2 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Ighv1-5A0A0A6YWG2 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC22.34■■□□□ 1.17
Ighv1-5A0A0A6YWG2 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Ighv1-5A0A0A6YWG2 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Ighv1-5A0A0A6YWG2 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ighv1-5A0A0A6YWG2 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ighv1-5A0A0A6YWG2 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Ighv1-5A0A0A6YWG2 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
Ighv1-5A0A0A6YWG2 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ighv1-5A0A0A6YWG2 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ighv1-5A0A0A6YWG2 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ighv1-5A0A0A6YWG2 AC153911.1-202ENSMUST00000218534 1034 ntBASIC21.9■■□□□ 1.1
Ighv1-5A0A0A6YWG2 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ighv1-5A0A0A6YWG2 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ighv1-5A0A0A6YWG2 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC21.82■■□□□ 1.08
Ighv1-5A0A0A6YWG2 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ighv1-5A0A0A6YWG2 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ighv1-5A0A0A6YWG2 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC21.66■■□□□ 1.06
Ighv1-5A0A0A6YWG2 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ighv1-5A0A0A6YWG2 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC21.57■■□□□ 1.04
Ighv1-5A0A0A6YWG2 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ighv1-5A0A0A6YWG2 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC21.51■■□□□ 1.03
Ighv1-5A0A0A6YWG2 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ighv1-5A0A0A6YWG2 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ighv1-5A0A0A6YWG2 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ighv1-5A0A0A6YWG2 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ighv1-5A0A0A6YWG2 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC21.39■■□□□ 1.01
Ighv1-5A0A0A6YWG2 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Ighv1-5A0A0A6YWG2 Gm25238-201ENSMUST00000174914 89 ntBASIC21.32■■□□□ 1
Ighv1-5A0A0A6YWG2 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Ighv1-5A0A0A6YWG2 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Ighv1-5A0A0A6YWG2 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC21.15■□□□□ 0.98
Ighv1-5A0A0A6YWG2 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ighv1-5A0A0A6YWG2 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ighv1-5A0A0A6YWG2 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ighv1-5A0A0A6YWG2 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
Ighv1-5A0A0A6YWG2 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ighv1-5A0A0A6YWG2 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC20.97■□□□□ 0.95
Ighv1-5A0A0A6YWG2 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ighv1-5A0A0A6YWG2 Gm27325-201ENSMUST00000175467 74 ntBASIC20.92■□□□□ 0.94
Ighv1-5A0A0A6YWG2 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ighv1-5A0A0A6YWG2 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC20.88■□□□□ 0.93
Ighv1-5A0A0A6YWG2 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Ighv1-5A0A0A6YWG2 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC20.77■□□□□ 0.92
Ighv1-5A0A0A6YWG2 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Ighv1-5A0A0A6YWG2 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC20.75■□□□□ 0.91
Ighv1-5A0A0A6YWG2 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC20.72■□□□□ 0.91
Ighv1-5A0A0A6YWG2 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ighv1-5A0A0A6YWG2 Gm42596-201ENSMUST00000196305 1958 ntBASIC20.66■□□□□ 0.9
Ighv1-5A0A0A6YWG2 Gm10524-201ENSMUST00000181931 1893 ntBASIC20.65■□□□□ 0.9
Ighv1-5A0A0A6YWG2 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ighv1-5A0A0A6YWG2 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ighv1-5A0A0A6YWG2 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Ighv1-5A0A0A6YWG2 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ighv1-5A0A0A6YWG2 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
Ighv1-5A0A0A6YWG2 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ighv1-5A0A0A6YWG2 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ighv1-5A0A0A6YWG2 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ighv1-5A0A0A6YWG2 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC20.55■□□□□ 0.88
Ighv1-5A0A0A6YWG2 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Ighv1-5A0A0A6YWG2 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ighv1-5A0A0A6YWG2 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ighv1-5A0A0A6YWG2 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ighv1-5A0A0A6YWG2 Rab21-202ENSMUST00000218831 843 ntBASIC20.49■□□□□ 0.87
Ighv1-5A0A0A6YWG2 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ighv1-5A0A0A6YWG2 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ighv1-5A0A0A6YWG2 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ighv1-5A0A0A6YWG2 Gm25262-201ENSMUST00000174934 133 ntBASIC20.43■□□□□ 0.86
Ighv1-5A0A0A6YWG2 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC20.4■□□□□ 0.86
Ighv1-5A0A0A6YWG2 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ighv1-5A0A0A6YWG2 CT025624.2-201ENSMUST00000223609 1909 ntBASIC20.38■□□□□ 0.85
Ighv1-5A0A0A6YWG2 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Ighv1-5A0A0A6YWG2 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC20.36■□□□□ 0.85
Ighv1-5A0A0A6YWG2 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ighv1-5A0A0A6YWG2 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ighv1-5A0A0A6YWG2 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ighv1-5A0A0A6YWG2 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ighv1-5A0A0A6YWG2 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ighv1-5A0A0A6YWG2 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ighv1-5A0A0A6YWG2 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Ighv1-5A0A0A6YWG2 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ighv1-5A0A0A6YWG2 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ighv1-5A0A0A6YWG2 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 8.9 ms