Protein–RNA interactions for Protein: Q6P8I6

Cox11, Cytochrome c oxidase assembly protein COX11, mitochondrial, mousemouse

Predictions only

Length 275 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cox11Q6P8I6 Gm25239-201ENSMUST00000174915 86 ntBASIC25.99■■□□□ 1.75
Cox11Q6P8I6 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Cox11Q6P8I6 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Cox11Q6P8I6 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Cox11Q6P8I6 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Cox11Q6P8I6 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Cox11Q6P8I6 Gm15042-201ENSMUST00000120212 883 ntBASIC22.92■■□□□ 1.26
Cox11Q6P8I6 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Cox11Q6P8I6 Gm24109-201ENSMUST00000175489 103 ntBASIC22.39■■□□□ 1.17
Cox11Q6P8I6 Gm15045-201ENSMUST00000117359 883 ntBASIC22.34■■□□□ 1.17
Cox11Q6P8I6 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Cox11Q6P8I6 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
Cox11Q6P8I6 Psd-208ENSMUST00000224556 2034 ntBASIC22.16■■□□□ 1.14
Cox11Q6P8I6 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Cox11Q6P8I6 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Cox11Q6P8I6 Gm23366-201ENSMUST00000175022 89 ntBASIC21.83■■□□□ 1.09
Cox11Q6P8I6 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Cox11Q6P8I6 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cox11Q6P8I6 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cox11Q6P8I6 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cox11Q6P8I6 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cox11Q6P8I6 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cox11Q6P8I6 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cox11Q6P8I6 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Cox11Q6P8I6 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC21.41■■□□□ 1.02
Cox11Q6P8I6 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cox11Q6P8I6 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cox11Q6P8I6 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC21.32■■□□□ 1
Cox11Q6P8I6 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cox11Q6P8I6 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cox11Q6P8I6 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cox11Q6P8I6 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Cox11Q6P8I6 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cox11Q6P8I6 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cox11Q6P8I6 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cox11Q6P8I6 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cox11Q6P8I6 AC153911.1-202ENSMUST00000218534 1034 ntBASIC21.01■□□□□ 0.95
Cox11Q6P8I6 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cox11Q6P8I6 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC20.94■□□□□ 0.94
Cox11Q6P8I6 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cox11Q6P8I6 Gm42596-201ENSMUST00000196305 1958 ntBASIC20.9■□□□□ 0.94
Cox11Q6P8I6 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cox11Q6P8I6 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cox11Q6P8I6 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
Cox11Q6P8I6 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC20.69■□□□□ 0.9
Cox11Q6P8I6 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Cox11Q6P8I6 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
Cox11Q6P8I6 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cox11Q6P8I6 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC20.67■□□□□ 0.9
Cox11Q6P8I6 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cox11Q6P8I6 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cox11Q6P8I6 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cox11Q6P8I6 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cox11Q6P8I6 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC20.57■□□□□ 0.88
Cox11Q6P8I6 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cox11Q6P8I6 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cox11Q6P8I6 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cox11Q6P8I6 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Cox11Q6P8I6 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cox11Q6P8I6 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cox11Q6P8I6 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cox11Q6P8I6 Gm25238-201ENSMUST00000174914 89 ntBASIC20.41■□□□□ 0.86
Cox11Q6P8I6 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cox11Q6P8I6 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC20.37■□□□□ 0.85
Cox11Q6P8I6 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC20.34■□□□□ 0.85
Cox11Q6P8I6 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cox11Q6P8I6 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Cox11Q6P8I6 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cox11Q6P8I6 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
Cox11Q6P8I6 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC20.14■□□□□ 0.81
Cox11Q6P8I6 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cox11Q6P8I6 Gm27325-201ENSMUST00000175467 74 ntBASIC20.1■□□□□ 0.81
Cox11Q6P8I6 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cox11Q6P8I6 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cox11Q6P8I6 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC20.06■□□□□ 0.8
Cox11Q6P8I6 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cox11Q6P8I6 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cox11Q6P8I6 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC20■□□□□ 0.79
Cox11Q6P8I6 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Cox11Q6P8I6 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Cox11Q6P8I6 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC19.97■□□□□ 0.79
Cox11Q6P8I6 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Cox11Q6P8I6 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC19.96■□□□□ 0.79
Cox11Q6P8I6 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC19.93■□□□□ 0.78
Cox11Q6P8I6 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC19.93■□□□□ 0.78
Cox11Q6P8I6 Zxda-201ENSMUST00000117281 2621 ntBASIC19.89■□□□□ 0.78
Cox11Q6P8I6 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cox11Q6P8I6 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Cox11Q6P8I6 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cox11Q6P8I6 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Cox11Q6P8I6 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cox11Q6P8I6 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cox11Q6P8I6 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cox11Q6P8I6 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Cox11Q6P8I6 Gm10524-201ENSMUST00000181931 1893 ntBASIC19.84■□□□□ 0.77
Cox11Q6P8I6 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cox11Q6P8I6 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cox11Q6P8I6 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cox11Q6P8I6 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cox11Q6P8I6 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms