Protein–RNA interactions for Protein: P62878

Rbx1, E3 ubiquitin-protein ligase RBX1, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbx1P62878 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Rbx1P62878 Gm25239-201ENSMUST00000174915 86 ntBASIC24.65■■□□□ 1.54
Rbx1P62878 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Rbx1P62878 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Rbx1P62878 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Rbx1P62878 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
Rbx1P62878 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
Rbx1P62878 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Rbx1P62878 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Rbx1P62878 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Rbx1P62878 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Rbx1P62878 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Rbx1P62878 Psd-208ENSMUST00000224556 2034 ntBASIC22.36■■□□□ 1.17
Rbx1P62878 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Rbx1P62878 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Rbx1P62878 Gm15042-201ENSMUST00000120212 883 ntBASIC22■■□□□ 1.11
Rbx1P62878 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Rbx1P62878 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Rbx1P62878 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rbx1P62878 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Rbx1P62878 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Rbx1P62878 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rbx1P62878 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Rbx1P62878 Gm15045-201ENSMUST00000117359 883 ntBASIC21.56■■□□□ 1.04
Rbx1P62878 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Rbx1P62878 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rbx1P62878 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rbx1P62878 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Rbx1P62878 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC21.4■■□□□ 1.02
Rbx1P62878 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rbx1P62878 Gm42596-201ENSMUST00000196305 1958 ntBASIC21.39■■□□□ 1.02
Rbx1P62878 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC21.36■■□□□ 1.01
Rbx1P62878 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rbx1P62878 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rbx1P62878 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rbx1P62878 Gm24109-201ENSMUST00000175489 103 ntBASIC21.12■□□□□ 0.97
Rbx1P62878 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rbx1P62878 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rbx1P62878 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rbx1P62878 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rbx1P62878 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rbx1P62878 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rbx1P62878 Zxda-201ENSMUST00000117281 2621 ntBASIC20.95■□□□□ 0.94
Rbx1P62878 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rbx1P62878 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rbx1P62878 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rbx1P62878 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rbx1P62878 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Rbx1P62878 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC20.83■□□□□ 0.92
Rbx1P62878 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Rbx1P62878 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rbx1P62878 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rbx1P62878 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rbx1P62878 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC20.75■□□□□ 0.91
Rbx1P62878 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Rbx1P62878 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC20.7■□□□□ 0.9
Rbx1P62878 Gm23366-201ENSMUST00000175022 89 ntBASIC20.67■□□□□ 0.9
Rbx1P62878 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Rbx1P62878 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rbx1P62878 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rbx1P62878 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC20.59■□□□□ 0.89
Rbx1P62878 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rbx1P62878 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rbx1P62878 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rbx1P62878 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rbx1P62878 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rbx1P62878 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rbx1P62878 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rbx1P62878 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rbx1P62878 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rbx1P62878 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Rbx1P62878 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Rbx1P62878 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rbx1P62878 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
Rbx1P62878 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rbx1P62878 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Rbx1P62878 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC20.24■□□□□ 0.83
Rbx1P62878 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Rbx1P62878 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rbx1P62878 AC153911.1-202ENSMUST00000218534 1034 ntBASIC20.22■□□□□ 0.83
Rbx1P62878 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Rbx1P62878 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rbx1P62878 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC20.17■□□□□ 0.82
Rbx1P62878 Gm10524-201ENSMUST00000181931 1893 ntBASIC20.12■□□□□ 0.81
Rbx1P62878 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rbx1P62878 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rbx1P62878 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Rbx1P62878 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rbx1P62878 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rbx1P62878 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Rbx1P62878 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rbx1P62878 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rbx1P62878 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rbx1P62878 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Rbx1P62878 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Rbx1P62878 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
Rbx1P62878 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC19.92■□□□□ 0.78
Rbx1P62878 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rbx1P62878 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rbx1P62878 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms