RNA–Protein interactions for RNA: ENSMUST00000042724.7

Usp38-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 38, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Usp38, Length 4,707 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp38-201ENSMUST00000042724 Trav13n-1A0A0G2JEU8 110 aa11.3□□□□□ -0.6
Usp38-201ENSMUST00000042724 Trav13d-4A0A0G2JFX3 110 aa11.3□□□□□ -0.6
Usp38-201ENSMUST00000042724 Plscr4P58196 326 aa11.3□□□□□ -0.6
Usp38-201ENSMUST00000042724 Esm1Q9QYY7 184 aa11.3□□□□□ -0.6
Usp38-201ENSMUST00000042724 Ighv1-63A0A075B5X2 117 aa11.29□□□□□ -0.6
Usp38-201ENSMUST00000042724 Defb47Q30KN1 79 aa11.29□□□□□ -0.6
Usp38-201ENSMUST00000042724 Gm10542F6XDR3 90 aa11.28□□□□□ -0.6
Usp38-201ENSMUST00000042724 Prr9Q8BV84 116 aa11.28□□□□□ -0.6
Usp38-201ENSMUST00000042724 Tax1bp3Q9DBG9 124 aa11.28□□□□□ -0.6
Usp38-201ENSMUST00000042724 Reg3bP35230 175 aa11.27□□□□□ -0.6
Usp38-201ENSMUST00000042724 Cep350E9Q309 3095 aa11.27□□□□□ -0.6
Usp38-201ENSMUST00000042724 Defa2P28309 93 aa11.27□□□□□ -0.61
Usp38-201ENSMUST00000042724 Ly6gP35461 111 aa11.27□□□□□ -0.61
Usp38-201ENSMUST00000042724 Foxc1Q61572 553 aa11.27□□□□□ -0.61
Usp38-201ENSMUST00000042724 Igkv4-72A0A0B4J1I4 117 aa11.27□□□□□ -0.61
Usp38-201ENSMUST00000042724 FcorP0DJI6 106 aa11.27□□□□□ -0.61
Usp38-201ENSMUST00000042724 Smlr1J3QMJ4 66 aa11.26□□□□□ -0.61
Usp38-201ENSMUST00000042724 CnfnQ6PCW6 111 aa11.26□□□□□ -0.61
Usp38-201ENSMUST00000042724 Notch2O35516 2470 aa11.26□□□□□ -0.61
Usp38-201ENSMUST00000042724 Ighv1-5A0A0A6YWG2 117 aa11.26□□□□□ -0.61
Usp38-201ENSMUST00000042724 Smrp1Q2MH31 260 aa11.26□□□□□ -0.61
Usp38-201ENSMUST00000042724 Igkv4-79A0A075B5L8 119 aa11.25□□□□□ -0.61
Usp38-201ENSMUST00000042724 Ighv1-66A0A075B5X5 117 aa11.25□□□□□ -0.61
Usp38-201ENSMUST00000042724 Igkv4-53A0A0G2JFC6 119 aa11.25□□□□□ -0.61
Usp38-201ENSMUST00000042724 MrapQ9D159 127 aa11.25□□□□□ -0.61
Usp38-201ENSMUST00000042724 Rpl32P62911 135 aaKnown RBP11.25□□□□□ -0.61
Usp38-201ENSMUST00000042724 Dscaml1Q4VA61 2053 aa11.25□□□□□ -0.61
Usp38-201ENSMUST00000042724 Sh2d1aO88890 126 aa11.25□□□□□ -0.61
Usp38-201ENSMUST00000042724 1700010B08RikQ9DAI7 102 aa11.25□□□□□ -0.61
Usp38-201ENSMUST00000042724 Igkv4-54A0A0G2JES9 117 aa11.24□□□□□ -0.61
Usp38-201ENSMUST00000042724 P18527 97 aa11.24□□□□□ -0.61
Usp38-201ENSMUST00000042724 Cox7b2Q9D2H1 82 aa11.24□□□□□ -0.61
Usp38-201ENSMUST00000042724 Samd13D3YUG0 102 aa11.24□□□□□ -0.61
Usp38-201ENSMUST00000042724 Chchd7Q8K2Q5 85 aa11.24□□□□□ -0.61
Usp38-201ENSMUST00000042724 Trav7-6A0A075B640 112 aa11.24□□□□□ -0.61
Usp38-201ENSMUST00000042724 Gm44965A0A0N4SVR3 59 aa11.24□□□□□ -0.61
Usp38-201ENSMUST00000042724 Trav13-4-dv7A0A075B6C2 110 aa11.24□□□□□ -0.61
Usp38-201ENSMUST00000042724 Gm10518F6UQQ9 182 aa11.24□□□□□ -0.61
Usp38-201ENSMUST00000042724 4930564D02RikQ9D4S4 103 aa11.24□□□□□ -0.61
Usp38-201ENSMUST00000042724 Bahcc1Q3UHR0 2643 aa11.23□□□□□ -0.61
Usp38-201ENSMUST00000042724 Hivep2Q3UHF7 2430 aa11.23□□□□□ -0.61
Usp38-201ENSMUST00000042724 Trav14d-3-dv8A0A075B619 120 aa11.23□□□□□ -0.61
Usp38-201ENSMUST00000042724 Igkv4-69A0A0B4J1I6 116 aa11.22□□□□□ -0.61
Usp38-201ENSMUST00000042724 P01729 129 aa11.22□□□□□ -0.61
Usp38-201ENSMUST00000042724 Camk2n2Q78WH7 79 aa11.22□□□□□ -0.61
Usp38-201ENSMUST00000042724 Defa7P50705 93 aa11.22□□□□□ -0.61
Usp38-201ENSMUST00000042724 Cfc1P97766 202 aa11.22□□□□□ -0.61
Usp38-201ENSMUST00000042724 A930009A15RikG3UYI6 118 aa11.21□□□□□ -0.61
Usp38-201ENSMUST00000042724 Cox11Q6P8I6 275 aa11.21□□□□□ -0.61
Usp38-201ENSMUST00000042724 Triap1Q9D8Z2 76 aa11.21□□□□□ -0.61
Usp38-201ENSMUST00000042724 Hrct1Q9D6B9 109 aa11.21□□□□□ -0.62
Usp38-201ENSMUST00000042724 Igkv6-13A0A0G2JGY3 119 aa11.21□□□□□ -0.62
Usp38-201ENSMUST00000042724 PkigO70139 76 aa11.21□□□□□ -0.62
Usp38-201ENSMUST00000042724 CenpfE9Q3P4 2997 aaKnown RBP11.21□□□□□ -0.62
Usp38-201ENSMUST00000042724 Gm10490F6VBM2 120 aa11.2□□□□□ -0.62
Usp38-201ENSMUST00000042724 Fgf6P21658 208 aa11.2□□□□□ -0.62
Usp38-201ENSMUST00000042724 Gm16223Q8CBM3 117 aa11.2□□□□□ -0.62
Usp38-201ENSMUST00000042724 Ubl5Q9EPV8 73 aa11.2□□□□□ -0.62
Usp38-201ENSMUST00000042724 BC107364E9Q5A2 140 aa11.2□□□□□ -0.62
Usp38-201ENSMUST00000042724 Gm9922Q8C3P1 144 aa11.2□□□□□ -0.62
Usp38-201ENSMUST00000042724 CrygfQ9CXV3 174 aa11.2□□□□□ -0.62
Usp38-201ENSMUST00000042724 Trav9n-4A0A075B631 113 aa11.2□□□□□ -0.62
Usp38-201ENSMUST00000042724 Trav13-2A0A075B649 110 aa11.2□□□□□ -0.62
Usp38-201ENSMUST00000042724 Gm5464Q3UY29 175 aa11.19□□□□□ -0.62
Usp38-201ENSMUST00000042724 Polr2kQ63871 58 aa11.19□□□□□ -0.62
Usp38-201ENSMUST00000042724 Q9DAB9 146 aa11.19□□□□□ -0.62
Usp38-201ENSMUST00000042724 Gm26602M0QWA4 95 aa11.19□□□□□ -0.62
Usp38-201ENSMUST00000042724 Defb42Q8BVB5 75 aa11.19□□□□□ -0.62
Usp38-201ENSMUST00000042724 Ighv2-6-8A0A0A6YWY9 116 aa11.18□□□□□ -0.62
Usp38-201ENSMUST00000042724 Ighv1-59A0A0A6YXE0 117 aa11.18□□□□□ -0.62
Usp38-201ENSMUST00000042724 Ube2bP63147 152 aa11.18□□□□□ -0.62
Usp38-201ENSMUST00000042724 PpdpfQ9CR37 115 aa11.18□□□□□ -0.62
Usp38-201ENSMUST00000042724 Igkv4-78A0A0A6YYE5 119 aa11.18□□□□□ -0.62
Usp38-201ENSMUST00000042724 Gm3443F7CCV5 94 aa11.18□□□□□ -0.62
Usp38-201ENSMUST00000042724 Defa23Q5G866 93 aa11.17□□□□□ -0.62
Usp38-201ENSMUST00000042724 Pla2g2eQ9QUL3 142 aa11.17□□□□□ -0.62
Usp38-201ENSMUST00000042724 Abca12E9Q876 2595 aa11.16□□□□□ -0.62
Usp38-201ENSMUST00000042724 Gm10647E9Q8X0 124 aa11.16□□□□□ -0.62
Usp38-201ENSMUST00000042724 Ighv8-12A0A0G2JDE1 119 aa11.16□□□□□ -0.62
Usp38-201ENSMUST00000042724 B230359F08RikA0A0B4J1K3 109 aa11.16□□□□□ -0.62
Usp38-201ENSMUST00000042724 4930546C10RikE9Q4Y3 121 aa11.16□□□□□ -0.62
Usp38-201ENSMUST00000042724 Ociad2Q9D8W7 154 aa11.16□□□□□ -0.62
Usp38-201ENSMUST00000042724 Setd2E9Q5F9 2537 aa11.15□□□□□ -0.62
Usp38-201ENSMUST00000042724 MtorQ9JLN9 2549 aa11.15□□□□□ -0.62
Usp38-201ENSMUST00000042724 MplkipQ9D011 178 aa11.15□□□□□ -0.62
Usp38-201ENSMUST00000042724 Inafm2A0A1L1STD6 152 aa11.14□□□□□ -0.63
Usp38-201ENSMUST00000042724 Defa25Q5G864 92 aa11.14□□□□□ -0.63
Usp38-201ENSMUST00000042724 Cryba4Q9JJV0 196 aa11.14□□□□□ -0.63
Usp38-201ENSMUST00000042724 Trav13-1A0A075B644 110 aa11.14□□□□□ -0.63
Usp38-201ENSMUST00000042724 Sigmar1O55242 223 aa11.14□□□□□ -0.63
Usp38-201ENSMUST00000042724 CtrlQ9ER05 264 aa11.14□□□□□ -0.63
Usp38-201ENSMUST00000042724 Gm10735Q3US96 136 aa11.13□□□□□ -0.63
Usp38-201ENSMUST00000042724 Trav3-4A0A075B654 114 aa11.13□□□□□ -0.63
Usp38-201ENSMUST00000042724 Igkv1-122A0A140T8M9 119 aa11.13□□□□□ -0.63
Usp38-201ENSMUST00000042724 Rbmy1bQ60990 380 aa11.13□□□□□ -0.63
Usp38-201ENSMUST00000042724 Lama2Q60675 3118 aaKnown RBP11.13□□□□□ -0.63
Usp38-201ENSMUST00000042724 Gm10509O88255 85 aa11.13□□□□□ -0.63
Usp38-201ENSMUST00000042724 Zfp292Q9Z2U2 2698 aa11.13□□□□□ -0.63
Usp38-201ENSMUST00000042724 Znf580Q9DB38 172 aa11.12□□□□□ -0.63
Usp38-201ENSMUST00000042724 A0A286YE02 88 aa11.12□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 41.7 ms