RNA–Protein interactions for RNA: ENST00000495537.1

KCTD3-205, Transcript of potassium channel tetramerization domain containing 3, humanhuman

TSL 1 (best)

Gene KCTD3, Length 2,722 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCTD3-205ENST00000495537 IGSF10Q6WRI0 2623 aa1.78□□□□□ -2.12
KCTD3-205ENST00000495537 DNAH17Q9UFH2 4485 aa1.78□□□□□ -2.12
KCTD3-205ENST00000495537 SPINK6Q6UWN8 80 aa1.77□□□□□ -2.13
KCTD3-205ENST00000495537 TGP01266 2768 aa1.77□□□□□ -2.13
KCTD3-205ENST00000495537 SPINK1P00995 79 aa1.76□□□□□ -2.13
KCTD3-205ENST00000495537 COX6B2Q6YFQ2 88 aa1.76□□□□□ -2.13
KCTD3-205ENST00000495537 DNAH3Q8TD57 4116 aa1.76□□□□□ -2.13
KCTD3-205ENST00000495537 SEC61BP60468 96 aaKnown RBP1.76□□□□□ -2.13
KCTD3-205ENST00000495537 FLNBO75369 2602 aaKnown RBP1.76□□□□□ -2.13
KCTD3-205ENST00000495537 VPS13DQ5THJ4 4388 aa1.75□□□□□ -2.13
KCTD3-205ENST00000495537 KRTAP10-5P60370 271 aa1.75□□□□□ -2.13
KCTD3-205ENST00000495537 RPL37P61927 97 aaKnown RBP1.75□□□□□ -2.13
KCTD3-205ENST00000495537 SPACA4Q8TDM5 124 aa1.75□□□□□ -2.13
KCTD3-205ENST00000495537 FBN3Q75N90 2809 aa1.75□□□□□ -2.13
KCTD3-205ENST00000495537 HECTD4Q9Y4D8 3996 aa1.75□□□□□ -2.13
KCTD3-205ENST00000495537 KRTAP4-4Q9BYR3 166 aa1.75□□□□□ -2.13
KCTD3-205ENST00000495537 CMYA5Q8N3K9 4069 aa1.74□□□□□ -2.13
KCTD3-205ENST00000495537 MAST4O15021 2626 aa1.74□□□□□ -2.13
KCTD3-205ENST00000495537 DNAH6Q9C0G6 4158 aa1.74□□□□□ -2.13
KCTD3-205ENST00000495537 DNAH7Q8WXX0 4024 aa1.74□□□□□ -2.13
KCTD3-205ENST00000495537 DYNC2H1Q8NCM8 4307 aaKnown RBP1.74□□□□□ -2.13
KCTD3-205ENST00000495537 KRTAP24-1Q3LI83 254 aa1.74□□□□□ -2.13
KCTD3-205ENST00000495537 C10orf95Q9H7T3 257 aa1.74□□□□□ -2.13
KCTD3-205ENST00000495537 AHNAKQ09666 5890 aaKnown RBP1.74□□□□□ -2.13
KCTD3-205ENST00000495537 COL6A5A8TX70 2615 aa1.73□□□□□ -2.13
KCTD3-205ENST00000495537 PRKDCP78527 4128 aaKnown RBP1.73□□□□□ -2.13
KCTD3-205ENST00000495537 USP24Q9UPU5 2620 aa1.73□□□□□ -2.13
KCTD3-205ENST00000495537 PCLOQ9Y6V0 5065 aa1.72□□□□□ -2.13
KCTD3-205ENST00000495537 HUWE1Q7Z6Z7 4374 aaKnown RBP1.72□□□□□ -2.13
KCTD3-205ENST00000495537 CIRBP-AS1Q8TBR5 109 aa1.72□□□□□ -2.13
KCTD3-205ENST00000495537 NSD1Q96L73 2696 aaPredicted RBP1.72□□□□□ -2.13
KCTD3-205ENST00000495537 STAB2Q8WWQ8 2551 aa1.71□□□□□ -2.13
KCTD3-205ENST00000495537 KRTAP13-4Q3LI77 160 aa1.7□□□□□ -2.14
KCTD3-205ENST00000495537 Q6ZRN7 208 aaPredicted RBP1.7□□□□□ -2.14
KCTD3-205ENST00000495537 KMT2AQ03164 3969 aa1.7□□□□□ -2.14
KCTD3-205ENST00000495537 KRTAP9-6A8MVA2 160 aa1.69□□□□□ -2.14
KCTD3-205ENST00000495537 KIAA1109Q2LD37 5005 aa1.69□□□□□ -2.14
KCTD3-205ENST00000495537 DMBT1Q9UGM3 2413 aaPredicted RBP1.69□□□□□ -2.14
KCTD3-205ENST00000495537 NEBP20929 6669 aa1.69□□□□□ -2.14
KCTD3-205ENST00000495537 KRTAP13-2Q52LG2 175 aa1.68□□□□□ -2.14
KCTD3-205ENST00000495537 S4R3F8 94 aa1.68□□□□□ -2.14
KCTD3-205ENST00000495537 DNAH2Q9P225 4427 aa1.68□□□□□ -2.14
KCTD3-205ENST00000495537 MGAM2Q2M2H8 2515 aa1.68□□□□□ -2.14
KCTD3-205ENST00000495537 STAB1Q9NY15 2570 aa1.68□□□□□ -2.14
KCTD3-205ENST00000495537 PLECQ15149 4684 aaKnown RBP1.67□□□□□ -2.14
KCTD3-205ENST00000495537 DNAH11Q96DT5 4516 aa1.67□□□□□ -2.14
KCTD3-205ENST00000495537 KRTAP12-2P59991 146 aa1.66□□□□□ -2.14
KCTD3-205ENST00000495537 KRTAP4-3Q9BYR4 195 aa1.66□□□□□ -2.14
KCTD3-205ENST00000495537 APLNQ9ULZ1 77 aa1.66□□□□□ -2.14
KCTD3-205ENST00000495537 A0A0D9SG42 100 aa1.65□□□□□ -2.15
KCTD3-205ENST00000495537 PLAC4Q8WY50 150 aa1.65□□□□□ -2.15
KCTD3-205ENST00000495537 KRTAP12-1P59990 96 aa1.65□□□□□ -2.15
KCTD3-205ENST00000495537 J3QKU1 62 aa1.64□□□□□ -2.15
KCTD3-205ENST00000495537 KRTAP1-4P0C5Y4 121 aa1.64□□□□□ -2.15
KCTD3-205ENST00000495537 RPS29P62273 56 aaKnown RBP1.64□□□□□ -2.15
KCTD3-205ENST00000495537 KRTAP5-5Q701N2 237 aaPredicted RBP1.64□□□□□ -2.15
KCTD3-205ENST00000495537 CAMK2N1Q7Z7J9 78 aa1.63□□□□□ -2.15
KCTD3-205ENST00000495537 UBE2DNLQ8IWF7 75 aa1.63□□□□□ -2.15
KCTD3-205ENST00000495537 KRTAP10-12P60413 245 aa1.63□□□□□ -2.15
KCTD3-205ENST00000495537 SMR3AQ99954 134 aa1.63□□□□□ -2.15
KCTD3-205ENST00000495537 LRP1BQ9NZR2 4599 aa1.62□□□□□ -2.15
KCTD3-205ENST00000495537 DNAH5Q8TE73 4624 aa1.62□□□□□ -2.15
KCTD3-205ENST00000495537 SACSQ9NZJ4 4579 aa1.61□□□□□ -2.15
KCTD3-205ENST00000495537 CRCT1Q9UGL9 99 aa1.61□□□□□ -2.15
KCTD3-205ENST00000495537 VPS13BQ7Z7G8 4022 aa1.61□□□□□ -2.15
KCTD3-205ENST00000495537 PKHD1L1Q86WI1 4243 aa1.6□□□□□ -2.15
KCTD3-205ENST00000495537 PRO2289Q9P1D8 64 aa1.6□□□□□ -2.15
KCTD3-205ENST00000495537 KRTAP20-1Q3LI63 56 aa1.59□□□□□ -2.15
KCTD3-205ENST00000495537 MYCBP2O75592 4640 aa1.59□□□□□ -2.16
KCTD3-205ENST00000495537 M0QZ58 72 aa1.59□□□□□ -2.16
KCTD3-205ENST00000495537 SSPOA2VEC9 5147 aa1.58□□□□□ -2.16
KCTD3-205ENST00000495537 STARD9Q9P2P6 4700 aa1.58□□□□□ -2.16
KCTD3-205ENST00000495537 SPRR5A0A1B0GTR4 108 aa1.58□□□□□ -2.16
KCTD3-205ENST00000495537 KRTAP5-7Q6L8G8 165 aa1.57□□□□□ -2.16
KCTD3-205ENST00000495537 APOBP04114 4563 aaKnown RBP1.57□□□□□ -2.16
KCTD3-205ENST00000495537 RYR1P21817 5038 aa1.56□□□□□ -2.16
KCTD3-205ENST00000495537 PKD1P98161 4303 aa1.56□□□□□ -2.16
KCTD3-205ENST00000495537 PP632Q6XCG6 107 aa1.56□□□□□ -2.16
KCTD3-205ENST00000495537 PKHD1P08F94 4074 aa1.56□□□□□ -2.16
KCTD3-205ENST00000495537 LRP1Q07954 4544 aaKnown RBP1.56□□□□□ -2.16
KCTD3-205ENST00000495537 A0A1B0GVY2 172 aa1.56□□□□□ -2.16
KCTD3-205ENST00000495537 LCE1FQ5T754 118 aa1.56□□□□□ -2.16
KCTD3-205ENST00000495537 FAT2Q9NYQ8 4349 aa1.56□□□□□ -2.16
KCTD3-205ENST00000495537 C9orf92A6NGG3 77 aa1.55□□□□□ -2.16
KCTD3-205ENST00000495537 TNXBP22105 4242 aa1.54□□□□□ -2.16
KCTD3-205ENST00000495537 BIRC6Q9NR09 4857 aa1.54□□□□□ -2.16
KCTD3-205ENST00000495537 INE1O15225 51 aa1.53□□□□□ -2.16
KCTD3-205ENST00000495537 KRTAP10-8P60410 259 aa1.53□□□□□ -2.16
KCTD3-205ENST00000495537 HSPG2P98160 4391 aa1.52□□□□□ -2.17
KCTD3-205ENST00000495537 HERC1Q15751 4861 aa1.51□□□□□ -2.17
KCTD3-205ENST00000495537 KRTAP10-1P60331 282 aa1.5□□□□□ -2.17
KCTD3-205ENST00000495537 RYR2Q92736 4967 aa1.5□□□□□ -2.17
KCTD3-205ENST00000495537 RYR3Q15413 4870 aa1.49□□□□□ -2.17
KCTD3-205ENST00000495537 R4GN34 69 aa1.49□□□□□ -2.17
KCTD3-205ENST00000495537 LCE3CQ5T5A8 94 aa1.48□□□□□ -2.17
KCTD3-205ENST00000495537 DYNC1H1Q14204 4646 aaKnown RBP1.48□□□□□ -2.17
KCTD3-205ENST00000495537 AHNAK2Q8IVF2 5795 aa1.46□□□□□ -2.17
KCTD3-205ENST00000495537 FAT1Q14517 4588 aa1.46□□□□□ -2.18
KCTD3-205ENST00000495537 OBSCNQ5VST9 7968 aa1.46□□□□□ -2.18
KCTD3-205ENST00000495537 LCE3AQ5TA76 89 aa1.45□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms