RNA–Protein interactions for RNA: ENST00000495537.1

KCTD3-205, Transcript of potassium channel tetramerization domain containing 3, humanhuman

TSL 1 (best)

Gene KCTD3, Length 2,722 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCTD3-205ENST00000495537 AEBP2Q6ZN18 517 aaPredicted RBP11.82□□□□□ -0.52
KCTD3-205ENST00000495537 CHIC1Q5VXU3 224 aa11.23□□□□□ -0.61
KCTD3-205ENST00000495537 SENP3Q9H4L4 574 aaPredicted RBP10.2□□□□□ -0.78
KCTD3-205ENST00000495537 PHF23Q9BUL5 403 aaPredicted RBP10.01□□□□□ -0.81
KCTD3-205ENST00000495537 FOXD1Q16676 465 aa9.45□□□□□ -0.9
KCTD3-205ENST00000495537 PLPPR3Q6T4P5 718 aa8.98□□□□□ -0.97
KCTD3-205ENST00000495537 MSH5O43196 834 aa8.96□□□□□ -0.98
KCTD3-205ENST00000495537 PIAS4Q8N2W9 510 aaPredicted RBP8.85□□□□□ -0.99
KCTD3-205ENST00000495537 POTEDQ86YR6 584 aa8.78□□□□□ -1
KCTD3-205ENST00000495537 PPP6R1Q9UPN7 881 aa8.74□□□□□ -1.01
KCTD3-205ENST00000495537 ADRA2BP18089 450 aa8.73□□□□□ -1.01
KCTD3-205ENST00000495537 SCAF1Q9H7N4 1312 aaKnown RBP8.12□□□□□ -1.11
KCTD3-205ENST00000495537 DMRT2Q9Y5R5 561 aa8.06□□□□□ -1.12
KCTD3-205ENST00000495537 MAPK8IP2Q13387 824 aaPredicted RBP8.01□□□□□ -1.13
KCTD3-205ENST00000495537 PPP4R3CPQ6ZMV5 832 aa7.83□□□□□ -1.16
KCTD3-205ENST00000495537 HOXD11P31277 338 aaPredicted RBP7.73□□□□□ -1.17
KCTD3-205ENST00000495537 CNKSR2Q8WXI2 1034 aa7.73□□□□□ -1.17
KCTD3-205ENST00000495537 DCAF8L1A6NGE4 600 aa7.73□□□□□ -1.17
KCTD3-205ENST00000495537 CACNB1Q02641 598 aaPredicted RBP7.7□□□□□ -1.18
KCTD3-205ENST00000495537 RNF216Q9NWF9 866 aaPredicted RBP7.68□□□□□ -1.18
KCTD3-205ENST00000495537 NCBP3Q53F19 620 aaKnown RBP7.58□□□□□ -1.2
KCTD3-205ENST00000495537 RNF39Q9H2S5 420 aa7.58□□□□□ -1.2
KCTD3-205ENST00000495537 DNAJC5BQ9UF47 199 aa7.55□□□□□ -1.2
KCTD3-205ENST00000495537 C1QBPQ07021 282 aaKnown RBP7.52□□□□□ -1.21
KCTD3-205ENST00000495537 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.39□□□□□ -1.23
KCTD3-205ENST00000495537 NPM3O75607 178 aaKnown RBP7.37□□□□□ -1.23
KCTD3-205ENST00000495537 U3KPZ7 1027 aaPredicted RBP7.17□□□□□ -1.26
KCTD3-205ENST00000495537 KCNA4P22459 653 aa7.15□□□□□ -1.26
KCTD3-205ENST00000495537 CAPN15O75808 1086 aa7.12□□□□□ -1.27
KCTD3-205ENST00000495537 APLP2Q06481 763 aa7.12□□□□□ -1.27
KCTD3-205ENST00000495537 DSG3P32926 999 aa7.07□□□□□ -1.28
KCTD3-205ENST00000495537 SPINK5Q9NQ38 1064 aaPredicted RBP7.07□□□□□ -1.28
KCTD3-205ENST00000495537 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.06□□□□□ -1.28
KCTD3-205ENST00000495537 HNRNPUL2Q1KMD3 747 aaKnown RBP7.06□□□□□ -1.28
KCTD3-205ENST00000495537 SLC4A2P04920 1241 aa7.04□□□□□ -1.28
KCTD3-205ENST00000495537 ZNF219Q9P2Y4 722 aaPredicted RBP7.01□□□□□ -1.29
KCTD3-205ENST00000495537 SAMD1Q6SPF0 538 aaPredicted RBP6.99□□□□□ -1.29
KCTD3-205ENST00000495537 TRHP20396 242 aaPredicted RBP6.97□□□□□ -1.29
KCTD3-205ENST00000495537 ABCB7O75027 752 aa6.91□□□□□ -1.3
KCTD3-205ENST00000495537 POTEHQ6S545 545 aa6.89□□□□□ -1.31
KCTD3-205ENST00000495537 MYCNP04198 464 aaPredicted RBP6.88□□□□□ -1.31
KCTD3-205ENST00000495537 RBM42Q9BTD8 480 aaKnown RBP6.83□□□□□ -1.32
KCTD3-205ENST00000495537 SLC4A1APQ9BWU0 796 aaKnown RBP6.79□□□□□ -1.32
KCTD3-205ENST00000495537 POLA2Q14181 598 aa6.77□□□□□ -1.33
KCTD3-205ENST00000495537 FOXD4L1Q9NU39 408 aa6.76□□□□□ -1.33
KCTD3-205ENST00000495537 ZBTB12Q9Y330 459 aaPredicted RBP6.72□□□□□ -1.33
KCTD3-205ENST00000495537 CHRDL2Q6WN34 429 aa6.65□□□□□ -1.35
KCTD3-205ENST00000495537 AKT1S1Q96B36 256 aa6.63□□□□□ -1.35
KCTD3-205ENST00000495537 ATF5Q9Y2D1 282 aaPredicted RBP6.62□□□□□ -1.35
KCTD3-205ENST00000495537 ATXN8OSP0DMR3 200 aa6.6□□□□□ -1.35
KCTD3-205ENST00000495537 OSCARQ8IYS5 282 aa6.54□□□□□ -1.36
KCTD3-205ENST00000495537 ZBTB22O15209 634 aa6.53□□□□□ -1.36
KCTD3-205ENST00000495537 REM2Q8IYK8 340 aaPredicted RBP6.53□□□□□ -1.36
KCTD3-205ENST00000495537 FBLN2P98095 1184 aa6.51□□□□□ -1.37
KCTD3-205ENST00000495537 SPDYE2BA6NHP3 402 aa6.47□□□□□ -1.37
KCTD3-205ENST00000495537 SPDYE6P0CI01 402 aa6.47□□□□□ -1.37
KCTD3-205ENST00000495537 SPDYE2Q495Y8 402 aa6.47□□□□□ -1.37
KCTD3-205ENST00000495537 PIP4P2Q8N4L2 257 aa6.46□□□□□ -1.38
KCTD3-205ENST00000495537 PITPNM1O00562 1244 aa6.45□□□□□ -1.38
KCTD3-205ENST00000495537 SP7Q8TDD2 431 aaPredicted RBP6.44□□□□□ -1.38
KCTD3-205ENST00000495537 FXR2P51116 673 aaKnown RBP eCLIP6.42□□□□□ -1.38
KCTD3-205ENST00000495537 HAX1O00165 279 aa6.38□□□□□ -1.39
KCTD3-205ENST00000495537 SPDYE1Q8NFV5 336 aaPredicted RBP6.38□□□□□ -1.39
KCTD3-205ENST00000495537 ZNF692Q9BU19 519 aaPredicted RBP6.35□□□□□ -1.39
KCTD3-205ENST00000495537 MKRN4PQ13434 485 aaPredicted RBP6.33□□□□□ -1.4
KCTD3-205ENST00000495537 SSUH2Q9Y2M2 353 aa6.33□□□□□ -1.4
KCTD3-205ENST00000495537 CLEC11AQ9Y240 323 aa6.33□□□□□ -1.4
KCTD3-205ENST00000495537 PRKAR2AP13861 404 aaKnown RBP6.3□□□□□ -1.4
KCTD3-205ENST00000495537 PRR29P0C7W0 189 aa6.24□□□□□ -1.41
KCTD3-205ENST00000495537 PABPN1Q86U42 306 aaKnown RBP eCLIP6.24□□□□□ -1.41
KCTD3-205ENST00000495537 C19orf67A6NJJ6 358 aa6.22□□□□□ -1.41
KCTD3-205ENST00000495537 EVX2Q03828 476 aa6.21□□□□□ -1.42
KCTD3-205ENST00000495537 CSRNP3Q8WYN3 585 aa6.2□□□□□ -1.42
KCTD3-205ENST00000495537 CHADLQ6NUI6 762 aa6.17□□□□□ -1.42
KCTD3-205ENST00000495537 GABBR2O75899 941 aa6.13□□□□□ -1.43
KCTD3-205ENST00000495537 CLCN6P51797 869 aa6.13□□□□□ -1.43
KCTD3-205ENST00000495537 STAG3Q9UJ98 1225 aa6.13□□□□□ -1.43
KCTD3-205ENST00000495537 FARP1Q9Y4F1 1045 aaPredicted RBP6.12□□□□□ -1.43
KCTD3-205ENST00000495537 CD44P16070 742 aaKnown RBP6.1□□□□□ -1.43
KCTD3-205ENST00000495537 EHMT2Q96KQ7 1210 aa6.08□□□□□ -1.44
KCTD3-205ENST00000495537 SPDYE4A6NLX3 237 aa6.06□□□□□ -1.44
KCTD3-205ENST00000495537 LHX8Q68G74 356 aa6.04□□□□□ -1.44
KCTD3-205ENST00000495537 CREBZFQ9NS37 354 aa6.02□□□□□ -1.45
KCTD3-205ENST00000495537 ZNF579Q8NAF0 562 aaKnown RBP6.01□□□□□ -1.45
KCTD3-205ENST00000495537 PAK3O75914 559 aaPredicted RBP6.01□□□□□ -1.45
KCTD3-205ENST00000495537 ZRANB1Q9UGI0 708 aa6.01□□□□□ -1.45
KCTD3-205ENST00000495537 DCBLD2Q96PD2 775 aa6□□□□□ -1.45
KCTD3-205ENST00000495537 NPM1P06748 294 aaKnown RBP eCLIP6□□□□□ -1.45
KCTD3-205ENST00000495537 POTEIP0CG38 1075 aa5.95□□□□□ -1.46
KCTD3-205ENST00000495537 GALR2O43603 387 aaPredicted RBP5.9□□□□□ -1.47
KCTD3-205ENST00000495537 PLEKHG5O94827 1062 aa5.89□□□□□ -1.47
KCTD3-205ENST00000495537 MNX1P50219 401 aaPredicted RBP5.89□□□□□ -1.47
KCTD3-205ENST00000495537 PROM2Q8N271 834 aa5.89□□□□□ -1.47
KCTD3-205ENST00000495537 PHF12Q96QT6 1004 aa5.88□□□□□ -1.47
KCTD3-205ENST00000495537 ASTLQ6HA08 431 aaPredicted RBP5.81□□□□□ -1.48
KCTD3-205ENST00000495537 SLC39A7Q92504 469 aa5.81□□□□□ -1.48
KCTD3-205ENST00000495537 MS4A3Q96HJ5 214 aa5.81□□□□□ -1.48
KCTD3-205ENST00000495537 TSPYL2Q9H2G4 693 aaPredicted RBP5.81□□□□□ -1.48
KCTD3-205ENST00000495537 C7P10643 843 aa5.8□□□□□ -1.48
KCTD3-205ENST00000495537 MIER1Q8N108 512 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 117.4 ms