Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
KRTAP4-4Q9BYR3 AC092473.1-201ENST00000441098 221 ntBASIC6.67□□□□□ -1.34
KRTAP4-4Q9BYR3 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC6.62□□□□□ -1.35
KRTAP4-4Q9BYR3 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC6.6□□□□□ -1.35
KRTAP4-4Q9BYR3 AP001002.2-201ENST00000625137 386 ntBASIC6.59□□□□□ -1.35
KRTAP4-4Q9BYR3 AC109587.1-201ENST00000482368 962 ntTSL 3 BASIC6.56□□□□□ -1.36
KRTAP4-4Q9BYR3 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC6.52□□□□□ -1.37
KRTAP4-4Q9BYR3 AC079416.2-201ENST00000625035 1193 ntBASIC6.52□□□□□ -1.37
KRTAP4-4Q9BYR3 BNIP3P41-202ENST00000616656 861 ntBASIC6.42□□□□□ -1.38
KRTAP4-4Q9BYR3 DCD-201ENST00000293371 645 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
KRTAP4-4Q9BYR3 IFNA2-201ENST00000380206 1135 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
KRTAP4-4Q9BYR3 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
KRTAP4-4Q9BYR3 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
KRTAP4-4Q9BYR3 Metazoa_SRP.67-201ENST00000617099 296 ntBASIC6.3□□□□□ -1.4
KRTAP4-4Q9BYR3 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC6.26□□□□□ -1.41
KRTAP4-4Q9BYR3 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC6.22□□□□□ -1.41
KRTAP4-4Q9BYR3 MIR583HG-201ENST00000507997 704 ntTSL 2 BASIC6.22□□□□□ -1.41
KRTAP4-4Q9BYR3 AC108359.1-201ENST00000616451 1211 ntBASIC6.2□□□□□ -1.42
KRTAP4-4Q9BYR3 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC6.18□□□□□ -1.42
KRTAP4-4Q9BYR3 TMEM14EP-202ENST00000639378 1296 ntBASIC6.18□□□□□ -1.42
KRTAP4-4Q9BYR3 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
KRTAP4-4Q9BYR3 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC6.17□□□□□ -1.42
KRTAP4-4Q9BYR3 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC6.15□□□□□ -1.42
KRTAP4-4Q9BYR3 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.42
KRTAP4-4Q9BYR3 AL365223.1-201ENST00000574864 1297 ntBASIC6.14□□□□□ -1.43
KRTAP4-4Q9BYR3 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
KRTAP4-4Q9BYR3 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
KRTAP4-4Q9BYR3 UBE2Q2P6-202ENST00000617217 443 ntTSL 5 BASIC6.13□□□□□ -1.43
KRTAP4-4Q9BYR3 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
KRTAP4-4Q9BYR3 AL078595.1-201ENST00000404458 226 ntBASIC6.08□□□□□ -1.44
KRTAP4-4Q9BYR3 AL390728.6-201ENST00000566446 1246 ntBASIC6.08□□□□□ -1.44
KRTAP4-4Q9BYR3 AL353729.2-201ENST00000605859 1249 ntBASIC6.06□□□□□ -1.44
KRTAP4-4Q9BYR3 AC020910.4-201ENST00000612269 540 ntBASIC6.06□□□□□ -1.44
KRTAP4-4Q9BYR3 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC6.06□□□□□ -1.44
KRTAP4-4Q9BYR3 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC6.05□□□□□ -1.44
KRTAP4-4Q9BYR3 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
KRTAP4-4Q9BYR3 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
KRTAP4-4Q9BYR3 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC6.04□□□□□ -1.44
KRTAP4-4Q9BYR3 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC6.03□□□□□ -1.44
KRTAP4-4Q9BYR3 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
KRTAP4-4Q9BYR3 AC016180.1-201ENST00000567945 403 ntBASIC6.03□□□□□ -1.44
KRTAP4-4Q9BYR3 AC009948.4-201ENST00000604692 675 ntBASIC6.03□□□□□ -1.44
KRTAP4-4Q9BYR3 AC022079.1-201ENST00000621546 602 ntBASIC6.03□□□□□ -1.44
KRTAP4-4Q9BYR3 SEPT7P7-201ENST00000420492 1301 ntBASIC6.01□□□□□ -1.45
KRTAP4-4Q9BYR3 Z99916.3-201ENST00000623422 1080 ntBASIC6□□□□□ -1.45
KRTAP4-4Q9BYR3 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC5.99□□□□□ -1.45
KRTAP4-4Q9BYR3 KRTAP4-4-201ENST00000390661 1081 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
KRTAP4-4Q9BYR3 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC5.95□□□□□ -1.46
KRTAP4-4Q9BYR3 KATNBL1P2-201ENST00000433311 835 ntBASIC5.95□□□□□ -1.46
KRTAP4-4Q9BYR3 C1orf132-204ENST00000637970 1170 ntTSL 5 BASIC5.95□□□□□ -1.46
KRTAP4-4Q9BYR3 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
KRTAP4-4Q9BYR3 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
KRTAP4-4Q9BYR3 AC009446.1-201ENST00000519840 808 ntTSL 2 BASIC5.94□□□□□ -1.46
KRTAP4-4Q9BYR3 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
KRTAP4-4Q9BYR3 AL590133.2-202ENST00000561111 642 ntTSL 3 BASIC5.93□□□□□ -1.46
KRTAP4-4Q9BYR3 AL356512.1-201ENST00000607453 1739 ntBASIC5.92□□□□□ -1.46
KRTAP4-4Q9BYR3 AL355338.1-201ENST00000612598 913 ntTSL 2 BASIC5.92□□□□□ -1.46
KRTAP4-4Q9BYR3 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
KRTAP4-4Q9BYR3 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC5.91□□□□□ -1.46
KRTAP4-4Q9BYR3 AC013391.2-201ENST00000559041 501 ntTSL 5 BASIC5.91□□□□□ -1.46
KRTAP4-4Q9BYR3 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
KRTAP4-4Q9BYR3 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC5.9□□□□□ -1.46
KRTAP4-4Q9BYR3 KLK13-207ENST00000596955 737 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
KRTAP4-4Q9BYR3 AC034229.4-201ENST00000607861 441 ntBASIC5.9□□□□□ -1.46
KRTAP4-4Q9BYR3 AL355478.1-201ENST00000431686 821 ntTSL 5 BASIC5.89□□□□□ -1.47
KRTAP4-4Q9BYR3 RN7SL718P-201ENST00000581254 303 ntBASIC5.89□□□□□ -1.47
KRTAP4-4Q9BYR3 AC006213.4-201ENST00000616184 634 ntBASIC5.89□□□□□ -1.47
KRTAP4-4Q9BYR3 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
KRTAP4-4Q9BYR3 EIF2S2P3-201ENST00000428356 999 ntBASIC5.88□□□□□ -1.47
KRTAP4-4Q9BYR3 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
KRTAP4-4Q9BYR3 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
KRTAP4-4Q9BYR3 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC5.87□□□□□ -1.47
KRTAP4-4Q9BYR3 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC5.87□□□□□ -1.47
KRTAP4-4Q9BYR3 AC008686.1-203ENST00000591826 463 ntTSL 2 BASIC5.87□□□□□ -1.47
KRTAP4-4Q9BYR3 GAPDHP74-202ENST00000632456 782 ntBASIC5.87□□□□□ -1.47
KRTAP4-4Q9BYR3 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
KRTAP4-4Q9BYR3 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC5.86□□□□□ -1.47
KRTAP4-4Q9BYR3 AC137695.1-201ENST00000604126 489 ntBASIC5.86□□□□□ -1.47
KRTAP4-4Q9BYR3 AL391262.2-201ENST00000622466 494 ntBASIC5.86□□□□□ -1.47
KRTAP4-4Q9BYR3 AC093648.1-201ENST00000623546 606 ntBASIC5.86□□□□□ -1.47
KRTAP4-4Q9BYR3 AC093227.1-201ENST00000588040 1360 ntTSL 3 BASIC5.85□□□□□ -1.47
KRTAP4-4Q9BYR3 ATP6V1G1-201ENST00000374050 1080 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
KRTAP4-4Q9BYR3 LINC02407-202ENST00000553247 1083 ntTSL 3 BASIC5.84□□□□□ -1.47
KRTAP4-4Q9BYR3 AC009712.1-201ENST00000564938 316 ntBASIC5.84□□□□□ -1.47
KRTAP4-4Q9BYR3 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
KRTAP4-4Q9BYR3 AP002856.3-201ENST00000441665 635 ntTSL 3 BASIC5.83□□□□□ -1.48
KRTAP4-4Q9BYR3 CAMTA1-205ENST00000467404 546 ntTSL 3 BASIC5.83□□□□□ -1.48
KRTAP4-4Q9BYR3 AC092068.1-201ENST00000592525 454 ntTSL 2 BASIC5.83□□□□□ -1.48
KRTAP4-4Q9BYR3 AC005972.3-201ENST00000606304 481 ntBASIC5.82□□□□□ -1.48
KRTAP4-4Q9BYR3 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC5.81□□□□□ -1.48
KRTAP4-4Q9BYR3 MTND4LP12-201ENST00000448237 295 ntBASIC5.81□□□□□ -1.48
KRTAP4-4Q9BYR3 AC005332.10-201ENST00000612725 619 ntBASIC5.81□□□□□ -1.48
KRTAP4-4Q9BYR3 AC133485.6-201ENST00000624045 688 ntBASIC5.81□□□□□ -1.48
KRTAP4-4Q9BYR3 EIF2S2P5-201ENST00000457635 968 ntBASIC5.8□□□□□ -1.48
KRTAP4-4Q9BYR3 AKR1B10P2-201ENST00000577332 927 ntBASIC5.8□□□□□ -1.48
KRTAP4-4Q9BYR3 AC004223.2-201ENST00000590309 544 ntBASIC5.8□□□□□ -1.48
KRTAP4-4Q9BYR3 AL451064.1-201ENST00000607718 471 ntBASIC5.8□□□□□ -1.48
KRTAP4-4Q9BYR3 IFNA4-201ENST00000421715 978 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
KRTAP4-4Q9BYR3 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC5.77□□□□□ -1.49
KRTAP4-4Q9BYR3 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms