RNA–Protein interactions for RNA: ENST00000282641.6

A1CF-201, Transcript of APOBEC1 complementation factor, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene A1CF, Length 9,350 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-201ENST00000282641 FLGP20930 4061 aaPredicted RBP3.15□□□□□ -1.9
A1CF-201ENST00000282641 PKHD1P08F94 4074 aa3.15□□□□□ -1.91
A1CF-201ENST00000282641 DYNC1H1Q14204 4646 aaKnown RBP3.14□□□□□ -1.91
A1CF-201ENST00000282641 FRAS1Q86XX4 4008 aa3.13□□□□□ -1.91
A1CF-201ENST00000282641 KMT2AQ03164 3969 aa3.11□□□□□ -1.91
A1CF-201ENST00000282641 KRTAP2-3P0C7H8 128 aa3.1□□□□□ -1.91
A1CF-201ENST00000282641 KRTAP2-4Q9BYR9 128 aa3.1□□□□□ -1.91
A1CF-201ENST00000282641 KRTAP2-1Q9BYU5 128 aa3.1□□□□□ -1.91
A1CF-201ENST00000282641 KRTAP10-5P60370 271 aa3.1□□□□□ -1.91
A1CF-201ENST00000282641 LRP1Q07954 4544 aaKnown RBP3.07□□□□□ -1.92
A1CF-201ENST00000282641 LAMA3Q16787 3333 aa3.05□□□□□ -1.92
A1CF-201ENST00000282641 MUC3AQ02505 3323 aa3.05□□□□□ -1.92
A1CF-201ENST00000282641 PRKDCP78527 4128 aaKnown RBP3.05□□□□□ -1.92
A1CF-201ENST00000282641 DCHS1Q96JQ0 3298 aa3.04□□□□□ -1.92
A1CF-201ENST00000282641 UNC80Q8N2C7 3258 aa3.04□□□□□ -1.92
A1CF-201ENST00000282641 LAMA5O15230 3695 aa3.03□□□□□ -1.92
A1CF-201ENST00000282641 RYR1P21817 5038 aa3.02□□□□□ -1.93
A1CF-201ENST00000282641 VPS13CQ709C8 3753 aa3.02□□□□□ -1.93
A1CF-201ENST00000282641 ANK3Q12955 4377 aaKnown RBP3.01□□□□□ -1.93
A1CF-201ENST00000282641 HSPG2P98160 4391 aa3□□□□□ -1.93
A1CF-201ENST00000282641 CDH23Q9H251 3354 aa3□□□□□ -1.93
A1CF-201ENST00000282641 BIRC6Q9NR09 4857 aa3□□□□□ -1.93
A1CF-201ENST00000282641 KRTAP19-1Q8IUB9 90 aa3□□□□□ -1.93
A1CF-201ENST00000282641 KRTAP12-4P60329 112 aa2.99□□□□□ -1.93
A1CF-201ENST00000282641 KRTAP19-5Q3LI72 72 aa2.97□□□□□ -1.93
A1CF-201ENST00000282641 VCANP13611 3396 aa2.97□□□□□ -1.93
A1CF-201ENST00000282641 MT2AP02795 61 aa2.97□□□□□ -1.93
A1CF-201ENST00000282641 PKD1P98161 4303 aa2.97□□□□□ -1.93
A1CF-201ENST00000282641 ZFHX4Q86UP3 3567 aa2.96□□□□□ -1.93
A1CF-201ENST00000282641 LOC400499M0QZD8 3231 aa2.95□□□□□ -1.94
A1CF-201ENST00000282641 DMDP11532 3685 aa2.95□□□□□ -1.94
A1CF-201ENST00000282641 MT1EP04732 61 aa2.95□□□□□ -1.94
A1CF-201ENST00000282641 MT1LQ93083 61 aa2.95□□□□□ -1.94
A1CF-201ENST00000282641 DNAH17Q9UFH2 4485 aa2.95□□□□□ -1.94
A1CF-201ENST00000282641 MT1XP80297 61 aa2.94□□□□□ -1.94
A1CF-201ENST00000282641 MYO15AQ9UKN7 3530 aa2.93□□□□□ -1.94
A1CF-201ENST00000282641 DNAH14Q0VDD8 3507 aa2.92□□□□□ -1.94
A1CF-201ENST00000282641 LCE3EQ5T5B0 92 aa2.92□□□□□ -1.94
A1CF-201ENST00000282641 DNAH9Q9NYC9 4486 aa2.91□□□□□ -1.94
A1CF-201ENST00000282641 MT1AP04731 61 aa2.89□□□□□ -1.95
A1CF-201ENST00000282641 PCLOQ9Y6V0 5065 aa2.88□□□□□ -1.95
A1CF-201ENST00000282641 VPS13DQ5THJ4 4388 aa2.86□□□□□ -1.95
A1CF-201ENST00000282641 SPRR2AP35326 72 aa2.86□□□□□ -1.95
A1CF-201ENST00000282641 MT1GP13640 62 aa2.86□□□□□ -1.95
A1CF-201ENST00000282641 KRTAP10-7P60409 375 aaPredicted RBP2.85□□□□□ -1.95
A1CF-201ENST00000282641 SPRR2BP35325 72 aa2.84□□□□□ -1.96
A1CF-201ENST00000282641 WDFY3Q8IZQ1 3526 aa2.84□□□□□ -1.96
A1CF-201ENST00000282641 MT1HP80294 61 aa2.84□□□□□ -1.96
A1CF-201ENST00000282641 DNAH5Q8TE73 4624 aa2.84□□□□□ -1.96
A1CF-201ENST00000282641 LRP1BQ9NZR2 4599 aa2.83□□□□□ -1.96
A1CF-201ENST00000282641 LCE3DQ9BYE3 92 aa2.83□□□□□ -1.96
A1CF-201ENST00000282641 DNAH8Q96JB1 4490 aa2.83□□□□□ -1.96
A1CF-201ENST00000282641 MT1FP04733 61 aa2.82□□□□□ -1.96
A1CF-201ENST00000282641 PLECQ15149 4684 aaKnown RBP2.8□□□□□ -1.96
A1CF-201ENST00000282641 SVEP1Q4LDE5 3571 aa2.8□□□□□ -1.96
A1CF-201ENST00000282641 KRTAP4-1Q9BYQ7 146 aa2.79□□□□□ -1.96
A1CF-201ENST00000282641 KMT2CQ8NEZ4 4911 aaKnown RBP2.77□□□□□ -1.97
A1CF-201ENST00000282641 MT1BP07438 61 aa2.77□□□□□ -1.97
A1CF-201ENST00000282641 CELSR3Q9NYQ7 3312 aa2.76□□□□□ -1.97
A1CF-201ENST00000282641 SACSQ9NZJ4 4579 aa2.75□□□□□ -1.97
A1CF-201ENST00000282641 RYR2Q92736 4967 aa2.75□□□□□ -1.97
A1CF-201ENST00000282641 SPRR2FQ96RM1 72 aa2.74□□□□□ -1.97
A1CF-201ENST00000282641 KRTAP19-2Q3LHN2 52 aa2.74□□□□□ -1.97
A1CF-201ENST00000282641 SMG1Q96Q15 3661 aaKnown RBP2.73□□□□□ -1.97
A1CF-201ENST00000282641 RYR3Q15413 4870 aa2.71□□□□□ -1.97
A1CF-201ENST00000282641 FAT3Q8TDW7 4589 aa2.71□□□□□ -1.98
A1CF-201ENST00000282641 DNHD1Q96M86 4753 aa2.71□□□□□ -1.98
A1CF-201ENST00000282641 TNXBP22105 4242 aa2.71□□□□□ -1.98
A1CF-201ENST00000282641 SPEGQ15772 3267 aa2.71□□□□□ -1.98
A1CF-201ENST00000282641 CSMD3Q7Z407 3707 aa2.7□□□□□ -1.98
A1CF-201ENST00000282641 PKHD1L1Q86WI1 4243 aa2.69□□□□□ -1.98
A1CF-201ENST00000282641 APOBP04114 4563 aaKnown RBP2.69□□□□□ -1.98
A1CF-201ENST00000282641 HYDINQ4G0P3 5121 aa2.66□□□□□ -1.98
A1CF-201ENST00000282641 HERC1Q15751 4861 aa2.66□□□□□ -1.98
A1CF-201ENST00000282641 ASPMQ8IZT6 3477 aa2.65□□□□□ -1.99
A1CF-201ENST00000282641 RELNP78509 3460 aa2.64□□□□□ -1.99
A1CF-201ENST00000282641 KRTAP19-3Q7Z4W3 81 aa2.63□□□□□ -1.99
A1CF-201ENST00000282641 KRTAP9-3Q9BYQ3 159 aa2.62□□□□□ -1.99
A1CF-201ENST00000282641 KRTAP9-8Q9BYQ0 159 aa2.61□□□□□ -1.99
A1CF-201ENST00000282641 STARD9Q9P2P6 4700 aa2.61□□□□□ -1.99
A1CF-201ENST00000282641 MT1MQ8N339 61 aa2.61□□□□□ -1.99
A1CF-201ENST00000282641 HERC2O95714 4834 aa2.61□□□□□ -1.99
A1CF-201ENST00000282641 MUC17Q685J3 4493 aa2.59□□□□□ -1.99
A1CF-201ENST00000282641 CSMD1Q96PZ7 3565 aa2.59□□□□□ -1.99
A1CF-201ENST00000282641 LCE2CQ5TA81 110 aa2.56□□□□□ -2
A1CF-201ENST00000282641 SPRR2DP22532 72 aa2.56□□□□□ -2
A1CF-201ENST00000282641 SPRR2EP22531 72 aa2.55□□□□□ -2
A1CF-201ENST00000282641 FAT1Q14517 4588 aa2.55□□□□□ -2
A1CF-201ENST00000282641 PRM1P04553 51 aa2.54□□□□□ -2
A1CF-201ENST00000282641 KIAA1109Q2LD37 5005 aa2.54□□□□□ -2
A1CF-201ENST00000282641 CSMD2Q7Z408 3487 aa2.51□□□□□ -2.01
A1CF-201ENST00000282641 KRTAP19-7Q3SYF9 63 aa2.5□□□□□ -2.01
A1CF-201ENST00000282641 UBR4Q5T4S7 5183 aa2.5□□□□□ -2.01
A1CF-201ENST00000282641 LCE3BQ5TA77 95 aa2.49□□□□□ -2.01
A1CF-201ENST00000282641 CRCT1Q9UGL9 99 aa2.49□□□□□ -2.01
A1CF-201ENST00000282641 LRP2P98164 4655 aa2.48□□□□□ -2.01
A1CF-201ENST00000282641 ABCA13Q86UQ4 5058 aa2.43□□□□□ -2.02
A1CF-201ENST00000282641 KRTAP2-2Q9BYT5 123 aa2.42□□□□□ -2.02
A1CF-201ENST00000282641 KRTAP9-6A0A140TA67 174 aa2.41□□□□□ -2.02
A1CF-201ENST00000282641 HMCN2Q8NDA2 5059 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms