RNA–Protein interactions for RNA: YNR028W

CPR8, Transcript of Peptidyl-prolyl cis-trans isomerase (cyclophilin), yeastyeast

Gene CPR8, Length 927 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CPR8YNR028W SIS1P25294 352 aaKnown RBP9.02□□□□□ -0.97
CPR8YNR028W TRP5P00931 707 aaKnown RBP9.01□□□□□ -0.97
CPR8YNR028W CKB1P43639 278 aa8.97□□□□□ -0.97
CPR8YNR028W IOC2Q12072 812 aa8.97□□□□□ -0.97
CPR8YNR028W YEL023CP39992 682 aa8.94□□□□□ -0.98
CPR8YNR028W LDB19Q12502 818 aa8.94□□□□□ -0.98
CPR8YNR028W SOL3P38858 249 aa8.93□□□□□ -0.98
CPR8YNR028W YGR273CP53329 174 aa8.93□□□□□ -0.98
CPR8YNR028W REF2P42073 533 aaPredicted RBP8.91□□□□□ -0.98
CPR8YNR028W JIP4Q03361 876 aa8.91□□□□□ -0.98
CPR8YNR028W PTC4P38089 393 aa8.9□□□□□ -0.98
CPR8YNR028W NST1P53935 1240 aa8.89□□□□□ -0.99
CPR8YNR028W YNL035CP53962 389 aaKnown RBP8.89□□□□□ -0.99
CPR8YNR028W RTG1P32607 177 aa8.87□□□□□ -0.99
CPR8YNR028W VHR2P40041 505 aa8.87□□□□□ -0.99
CPR8YNR028W SPB4P25808 606 aaPredicted RBP8.85□□□□□ -0.99
CPR8YNR028W UBP14P38237 781 aaKnown RBP8.85□□□□□ -0.99
CPR8YNR028W DAN4P47179 1161 aa8.85□□□□□ -0.99
CPR8YNR028W AI4P03878 556 aa8.84□□□□□ -0.99
CPR8YNR028W PBS2P08018 668 aa8.84□□□□□ -0.99
CPR8YNR028W MPH3P0CE00 602 aa8.84□□□□□ -0.99
CPR8YNR028W YLR326WQ06170 240 aaKnown RBP8.84□□□□□ -0.99
CPR8YNR028W SEC61P32915 480 aa8.83□□□□□ -1
CPR8YNR028W KEX1P09620 729 aa8.82□□□□□ -1
CPR8YNR028W FKH1P40466 484 aa8.82□□□□□ -1
CPR8YNR028W ILV3P39522 585 aaKnown RBP8.8□□□□□ -1
CPR8YNR028W NCR1Q12200 1170 aa8.8□□□□□ -1
CPR8YNR028W MAK21Q12176 1025 aaKnown RBP8.79□□□□□ -1
CPR8YNR028W TFG1P41895 735 aaPredicted RBP8.78□□□□□ -1
CPR8YNR028W YDR090CQ03193 310 aa8.78□□□□□ -1
CPR8YNR028W COX6P00427 148 aa8.77□□□□□ -1.01
CPR8YNR028W RAD54P32863 898 aa8.77□□□□□ -1.01
CPR8YNR028W DSF2P38213 736 aa8.77□□□□□ -1.01
CPR8YNR028W KIC1P38692 1080 aa8.77□□□□□ -1.01
CPR8YNR028W AIR2Q12476 344 aaKnown RBP8.76□□□□□ -1.01
CPR8YNR028W PCS60P38137 543 aaKnown RBP RIP-Chip data8.75□□□□□ -1.01 RIP-Chip
CPR8YNR028W PML39Q03760 334 aa8.74□□□□□ -1.01
CPR8YNR028W MAM3Q12296 706 aa8.73□□□□□ -1.01
CPR8YNR028W SLI15P38283 698 aa8.72□□□□□ -1.01
CPR8YNR028W LEU3P08638 886 aa8.7□□□□□ -1.02
CPR8YNR028W YDL129WQ07555 291 aa8.7□□□□□ -1.02
CPR8YNR028W MID1P41821 548 aa8.69□□□□□ -1.02
CPR8YNR028W YJL171CP46992 396 aa8.68□□□□□ -1.02
CPR8YNR028W IES2P40154 320 aa8.67□□□□□ -1.02
CPR8YNR028W SAP30P38429 201 aa8.66□□□□□ -1.02
CPR8YNR028W PEX29Q03370 554 aa8.64□□□□□ -1.03
CPR8YNR028W BMT6Q12291 365 aa8.64□□□□□ -1.03
CPR8YNR028W RPP1BP10622 106 aaKnown RBP8.62□□□□□ -1.03
CPR8YNR028W NUP42P49686 430 aaKnown RBP8.6□□□□□ -1.03
CPR8YNR028W CDC73Q06697 393 aa8.6□□□□□ -1.03
CPR8YNR028W MPC54Q08550 464 aa8.6□□□□□ -1.03
CPR8YNR028W DPL1Q05567 589 aa8.59□□□□□ -1.03
CPR8YNR028W DIT2P21595 489 aa8.58□□□□□ -1.04
CPR8YNR028W ORC6P38826 435 aa8.58□□□□□ -1.04
CPR8YNR028W YNR021WP53723 404 aaKnown RBP8.54□□□□□ -1.04
CPR8YNR028W NMA111P53920 997 aa8.54□□□□□ -1.04
CPR8YNR028W ARH1P48360 493 aa8.53□□□□□ -1.04
CPR8YNR028W CSC1Q06538 782 aa8.53□□□□□ -1.04
CPR8YNR028W GAP1P19145 602 aaPredicted RBP8.52□□□□□ -1.05
CPR8YNR028W PSE1P32337 1089 aaKnown RBP8.52□□□□□ -1.05
CPR8YNR028W ISU2Q12056 156 aa8.52□□□□□ -1.05
CPR8YNR028W RPN1P38764 993 aaKnown RBP8.51□□□□□ -1.05
CPR8YNR028W PEX21P50091 288 aa8.51□□□□□ -1.05
CPR8YNR028W ELP4Q02884 456 aaKnown RBP8.51□□□□□ -1.05
CPR8YNR028W YDR344CQ05510 147 aa8.51□□□□□ -1.05
CPR8YNR028W HAP5Q02516 242 aa8.5□□□□□ -1.05
CPR8YNR028W GLC3P32775 704 aa8.49□□□□□ -1.05
CPR8YNR028W MVP1P40959 511 aaKnown RBP8.49□□□□□ -1.05
CPR8YNR028W TFB4Q12004 338 aa8.49□□□□□ -1.05
CPR8YNR028W RGR1P19263 1082 aa8.48□□□□□ -1.05
CPR8YNR028W PRE3P38624 215 aa8.47□□□□□ -1.05
CPR8YNR028W LEO1P38439 464 aa8.46□□□□□ -1.06
CPR8YNR028W ATF2P53296 535 aa8.46□□□□□ -1.06
CPR8YNR028W CHL1P22516 861 aaPredicted RBP8.45□□□□□ -1.06
CPR8YNR028W TUM1Q08686 304 aaKnown RBP8.45□□□□□ -1.06
CPR8YNR028W SPT23P35210 1082 aa8.43□□□□□ -1.06
CPR8YNR028W YPR109WQ06104 294 aa8.43□□□□□ -1.06
CPR8YNR028W AIM7Q12156 149 aa8.43□□□□□ -1.06
CPR8YNR028W YRR1Q12172 810 aa8.43□□□□□ -1.06
CPR8YNR028W BNI4P53858 892 aa8.42□□□□□ -1.06
CPR8YNR028W TEA1P47988 759 aa8.41□□□□□ -1.06
CPR8YNR028W CLB5P30283 435 aa8.4□□□□□ -1.06
CPR8YNR028W PTC2P39966 464 aaKnown RBP8.38□□□□□ -1.07
CPR8YNR028W PDR1P12383 1068 aa8.37□□□□□ -1.07
CPR8YNR028W KIN1P13185 1064 aa8.36□□□□□ -1.07
CPR8YNR028W NUD1P32336 851 aa8.32□□□□□ -1.08
CPR8YNR028W YML082WQ04533 649 aaKnown RBP8.32□□□□□ -1.08
CPR8YNR028W RAM1P22007 431 aa8.31□□□□□ -1.08
CPR8YNR028W NPL4P33755 580 aa8.3□□□□□ -1.08
CPR8YNR028W NIS1P53939 407 aa8.29□□□□□ -1.08
CPR8YNR028W YMR196WQ04336 1088 aa8.27□□□□□ -1.09
CPR8YNR028W YPR015CQ12531 247 aa8.27□□□□□ -1.09
CPR8YNR028W STR2P47164 639 aa8.26□□□□□ -1.09
CPR8YNR028W ISM1P48526 1002 aa8.26□□□□□ -1.09
CPR8YNR028W VRP1P37370 817 aa8.25□□□□□ -1.09
CPR8YNR028W FPK1P53739 893 aa8.25□□□□□ -1.09
CPR8YNR028W SIT4P20604 311 aa8.23□□□□□ -1.09
CPR8YNR028W BCK2P33306 851 aa8.23□□□□□ -1.09
CPR8YNR028W BUD20Q08004 166 aaPredicted RBP8.23□□□□□ -1.09
CPR8YNR028W KEX2P13134 814 aa8.22□□□□□ -1.09
Retrieved 100 of 5,963 RNA–protein pairs in 15.9 ms