RNA–Protein interactions for RNA: YNL326C

PFA3, Transcript of Palmitoyltransferase for Vac8p, yeastyeast

Gene PFA3, Length 1,011 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PFA3YNL326C RTG1P32607 177 aa8.57□□□□□ -1.04
PFA3YNL326C YNL035CP53962 389 aaKnown RBP8.57□□□□□ -1.04
PFA3YNL326C EDS1P38073 919 aa8.56□□□□□ -1.04
PFA3YNL326C SKI3P17883 1432 aaKnown RBP8.55□□□□□ -1.04
PFA3YNL326C PTC3P34221 468 aaKnown RBP8.55□□□□□ -1.04
PFA3YNL326C DCW1P36091 449 aa8.55□□□□□ -1.04
PFA3YNL326C JIP4Q03361 876 aa8.55□□□□□ -1.04
PFA3YNL326C NOP53Q12080 455 aaKnown RBP8.55□□□□□ -1.04
PFA3YNL326C SEC61P32915 480 aa8.54□□□□□ -1.04
PFA3YNL326C ATH1P48016 1211 aa8.53□□□□□ -1.04
PFA3YNL326C GUT1P32190 709 aa8.51□□□□□ -1.05
PFA3YNL326C NCR1Q12200 1170 aa8.51□□□□□ -1.05
PFA3YNL326C BMT6Q12291 365 aa8.5□□□□□ -1.05
PFA3YNL326C YEL023CP39992 682 aa8.49□□□□□ -1.05
PFA3YNL326C TFG1P41895 735 aaPredicted RBP8.49□□□□□ -1.05
PFA3YNL326C PTC4P38089 393 aa8.48□□□□□ -1.05
PFA3YNL326C DAN4P47179 1161 aa8.47□□□□□ -1.05
PFA3YNL326C HSL1P34244 1518 aa8.47□□□□□ -1.05
PFA3YNL326C SPT6P23615 1451 aaKnown RBP8.45□□□□□ -1.06
PFA3YNL326C SET1P38827 1080 aaKnown RBP8.42□□□□□ -1.06
PFA3YNL326C CHD1P32657 1468 aa8.39□□□□□ -1.07
PFA3YNL326C YDL129WQ07555 291 aa8.38□□□□□ -1.07
PFA3YNL326C HIR3P47171 1648 aa8.36□□□□□ -1.07
PFA3YNL326C XRN1P22147 1528 aaKnown RBP8.35□□□□□ -1.07
PFA3YNL326C NST1P53935 1240 aa8.35□□□□□ -1.07
PFA3YNL326C SAP30P38429 201 aa8.34□□□□□ -1.07
PFA3YNL326C AI4P03878 556 aa8.33□□□□□ -1.08
PFA3YNL326C SOL3P38858 249 aa8.33□□□□□ -1.08
PFA3YNL326C IFH1P39520 1085 aa8.33□□□□□ -1.08
PFA3YNL326C YGR273CP53329 174 aa8.32□□□□□ -1.08
PFA3YNL326C MPH3P0CE00 602 aa8.31□□□□□ -1.08
PFA3YNL326C PML39Q03760 334 aa8.29□□□□□ -1.08
PFA3YNL326C SIN3P22579 1536 aa8.27□□□□□ -1.09
PFA3YNL326C THO2P53552 1597 aaKnown RBP8.27□□□□□ -1.09
PFA3YNL326C MMS22Q06164 1454 aa8.26□□□□□ -1.09
PFA3YNL326C REV3P14284 1504 aa8.25□□□□□ -1.09
PFA3YNL326C CHL1P22516 861 aaPredicted RBP8.23□□□□□ -1.09
PFA3YNL326C PRE3P38624 215 aa8.22□□□□□ -1.09
PFA3YNL326C ILV3P39522 585 aaKnown RBP8.22□□□□□ -1.09
PFA3YNL326C YPR148CQ06523 435 aa8.22□□□□□ -1.09
PFA3YNL326C PEX29Q03370 554 aa8.21□□□□□ -1.1
PFA3YNL326C MON2P48563 1636 aaPredicted RBP8.21□□□□□ -1.1
PFA3YNL326C SWR1Q05471 1514 aa8.2□□□□□ -1.1
PFA3YNL326C SSK2P53599 1579 aa8.2□□□□□ -1.1
PFA3YNL326C MID1P41821 548 aa8.18□□□□□ -1.1
PFA3YNL326C KEX1P09620 729 aa8.17□□□□□ -1.1
PFA3YNL326C DMA1P38823 416 aa8.16□□□□□ -1.1
PFA3YNL326C YTA7P40340 1379 aa8.16□□□□□ -1.1
PFA3YNL326C ARH1P48360 493 aa8.16□□□□□ -1.1
PFA3YNL326C ELP4Q02884 456 aaKnown RBP8.16□□□□□ -1.1
PFA3YNL326C SLI15P38283 698 aa8.14□□□□□ -1.11
PFA3YNL326C VHR2P40041 505 aa8.14□□□□□ -1.11
PFA3YNL326C YLR326WQ06170 240 aaKnown RBP8.14□□□□□ -1.11
PFA3YNL326C MYO2P19524 1574 aaKnown RBP8.14□□□□□ -1.11
PFA3YNL326C TAF2P23255 1407 aa8.12□□□□□ -1.11
PFA3YNL326C UBP14P38237 781 aaKnown RBP8.12□□□□□ -1.11
PFA3YNL326C ESP1Q03018 1630 aa8.11□□□□□ -1.11
PFA3YNL326C VPS70P47161 811 aa8.11□□□□□ -1.11
PFA3YNL326C STU1P38198 1513 aa8.11□□□□□ -1.11
PFA3YNL326C POL1P13382 1468 aa8.11□□□□□ -1.11
PFA3YNL326C RAD54P32863 898 aa8.1□□□□□ -1.11
PFA3YNL326C BCK2P33306 851 aa8.1□□□□□ -1.11
PFA3YNL326C REF2P42073 533 aaPredicted RBP8.1□□□□□ -1.11
PFA3YNL326C HAP5Q02516 242 aa8.1□□□□□ -1.11
PFA3YNL326C MPC54Q08550 464 aa8.1□□□□□ -1.11
PFA3YNL326C YDR344CQ05510 147 aa8.09□□□□□ -1.11
PFA3YNL326C DPL1Q05567 589 aa8.09□□□□□ -1.11
PFA3YNL326C RPP1BP10622 106 aaKnown RBP8.07□□□□□ -1.12
PFA3YNL326C SPT23P35210 1082 aa8.07□□□□□ -1.12
PFA3YNL326C KIC1P38692 1080 aa8.07□□□□□ -1.12
PFA3YNL326C PCS60P38137 543 aaKnown RBP RIP-Chip data8.06□□□□□ -1.12not detected
PFA3YNL326C BNI4P53858 892 aa8.05□□□□□ -1.12
PFA3YNL326C RQC2Q12532 1038 aaKnown RBP8.05□□□□□ -1.12
PFA3YNL326C CKB1P43639 278 aa8.04□□□□□ -1.12
PFA3YNL326C NMA111P53920 997 aa8.04□□□□□ -1.12
PFA3YNL326C UFD4P33202 1483 aa8.04□□□□□ -1.12
PFA3YNL326C YDR090CQ03193 310 aa8.03□□□□□ -1.12
PFA3YNL326C MAK21Q12176 1025 aaKnown RBP8.03□□□□□ -1.12
PFA3YNL326C IKI3Q06706 1349 aaKnown RBP8.03□□□□□ -1.12
PFA3YNL326C YPK9Q12697 1472 aa8.02□□□□□ -1.13
PFA3YNL326C TAF7Q05021 590 aa8.02□□□□□ -1.13
PFA3YNL326C BUD4P47136 1447 aa8.02□□□□□ -1.13
PFA3YNL326C SAS10Q12136 610 aaPredicted RBP8.01□□□□□ -1.13
PFA3YNL326C ECM5Q03214 1411 aa8.01□□□□□ -1.13
PFA3YNL326C VRP1P37370 817 aa8□□□□□ -1.13
PFA3YNL326C ISU2Q12056 156 aa8□□□□□ -1.13
PFA3YNL326C PTC2P39966 464 aaKnown RBP7.99□□□□□ -1.13
PFA3YNL326C CDC73Q06697 393 aa7.99□□□□□ -1.13
PFA3YNL326C TRM732Q03496 1420 aa7.98□□□□□ -1.13
PFA3YNL326C MYO4P32492 1471 aa7.98□□□□□ -1.13
PFA3YNL326C COX6P00427 148 aa7.97□□□□□ -1.13
PFA3YNL326C YML082WQ04533 649 aaKnown RBP7.97□□□□□ -1.13
PFA3YNL326C DNA2P38859 1522 aa7.96□□□□□ -1.14
PFA3YNL326C YOR1P53049 1477 aa7.94□□□□□ -1.14
PFA3YNL326C XDJ1P39102 459 aa7.94□□□□□ -1.14
PFA3YNL326C SPP41P38904 1435 aa7.94□□□□□ -1.14
PFA3YNL326C ATG2P53855 1592 aa7.93□□□□□ -1.14
PFA3YNL326C NOP2P40991 618 aaKnown RBP7.92□□□□□ -1.14
PFA3YNL326C BPT1P14772 1559 aa7.92□□□□□ -1.14
PFA3YNL326C PBS2P08018 668 aa7.91□□□□□ -1.14
Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms