RNA–Protein interactions for RNA: YHR076W

PTC7, Transcript of Type 2C serine/threonine protein phosphatase (PP2C), yeast

Gene PTC7, Length 1,032 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PTC7	YHR076W	UBP9	P39967	754 aa		10.9	□□□□□ -0.66
PTC7	YHR076W	YPK9	Q12697	1472 aa		10.88	□□□□□ -0.67
PTC7	YHR076W	VMA1	P17255	1071 aa	Known RBP	10.88	□□□□□ -0.67
PTC7	YHR076W	NOP53	Q12080	455 aa	Known RBP	10.88	□□□□□ -0.67
PTC7	YHR076W	SAS10	Q12136	610 aa	Predicted RBP	10.85	□□□□□ -0.67
PTC7	YHR076W	PTC3	P34221	468 aa	Known RBP	10.79	□□□□□ -0.68
PTC7	YHR076W	EDS1	P38073	919 aa		10.79	□□□□□ -0.68
PTC7	YHR076W	WSC3	Q12215	556 aa		10.78	□□□□□ -0.68
PTC7	YHR076W	SCC2	Q04002	1493 aa		10.78	□□□□□ -0.68
PTC7	YHR076W	VPS70	P47161	811 aa		10.77	□□□□□ -0.69
PTC7	YHR076W	ATH1	P48016	1211 aa		10.77	□□□□□ -0.69
PTC7	YHR076W	GRE2	Q12068	342 aa	Known RBP	10.77	□□□□□ -0.69
PTC7	YHR076W	POL1	P13382	1468 aa		10.76	□□□□□ -0.69
PTC7	YHR076W	SAM3	Q08986	587 aa		10.76	□□□□□ -0.69
PTC7	YHR076W	CKB1	P43639	278 aa		10.74	□□□□□ -0.69
PTC7	YHR076W	YPR148C	Q06523	435 aa		10.74	□□□□□ -0.69
PTC7	YHR076W	GYP5	Q12344	894 aa		10.74	□□□□□ -0.69
PTC7	YHR076W	RPO31	P04051	1460 aa		10.74	□□□□□ -0.69
PTC7	YHR076W	MSB4	Q12317	492 aa		10.73	□□□□□ -0.69
PTC7	YHR076W	ABP1	P15891	592 aa	Known RBP	10.72	□□□□□ -0.69
PTC7	YHR076W	SET4	P42948	560 aa		10.71	□□□□□ -0.69
PTC7	YHR076W	YOL036W	Q08206	761 aa		10.71	□□□□□ -0.69
PTC7	YHR076W	YBL029C-A	Q3E756	94 aa		10.71	□□□□□ -0.69
PTC7	YHR076W	BPT1	P14772	1559 aa		10.7	□□□□□ -0.7
PTC7	YHR076W	UFD4	P33202	1483 aa		10.7	□□□□□ -0.7
PTC7	YHR076W	GUT1	P32190	709 aa		10.69	□□□□□ -0.7
PTC7	YHR076W	RKR1	Q04781	1562 aa		10.68	□□□□□ -0.7
PTC7	YHR076W	EAP1	P36041	632 aa	Known RBP	10.67	□□□□□ -0.7
PTC7	YHR076W	STU1	P38198	1513 aa		10.66	□□□□□ -0.7
PTC7	YHR076W	SPP1	Q03012	353 aa		10.65	□□□□□ -0.7
PTC7	YHR076W	TOP2	P06786	1428 aa	Known RBP	10.65	□□□□□ -0.7
PTC7	YHR076W	YCF1	P39109	1515 aa	Known RBP	10.64	□□□□□ -0.71
PTC7	YHR076W	VNX1	P42839	908 aa		10.64	□□□□□ -0.71
PTC7	YHR076W	HTA1	P04911	132 aa	Known RBP	10.63	□□□□□ -0.71
PTC7	YHR076W	HTA2	P04912	132 aa		10.63	□□□□□ -0.71
PTC7	YHR076W	SPB4	P25808	606 aa	Predicted RBP	10.63	□□□□□ -0.71
PTC7	YHR076W	DCW1	P36091	449 aa		10.63	□□□□□ -0.71
PTC7	YHR076W	YOR1	P53049	1477 aa		10.61	□□□□□ -0.71
PTC7	YHR076W	TY2B-LR1	P0C2J3	1770 aa		10.61	□□□□□ -0.71
PTC7	YHR076W	TY2B-F	P0CX63	1770 aa		10.61	□□□□□ -0.71
PTC7	YHR076W	TY2B-GR2	P0CX64	1770 aa		10.61	□□□□□ -0.71
PTC7	YHR076W	TY2B-C	P25384	1770 aa		10.61	□□□□□ -0.71
PTC7	YHR076W	TY2B-DR2	Q03494	1770 aa		10.61	□□□□□ -0.71
PTC7	YHR076W	TY1B-DR1	Q03855	1755 aa		10.61	□□□□□ -0.71
PTC7	YHR076W	TY2B-DR3	Q07791	1770 aa	Known RBP	10.61	□□□□□ -0.71
PTC7	YHR076W	TY2B-OR1	Q12113	1770 aa		10.61	□□□□□ -0.71
PTC7	YHR076W	TY2B-DR1	Q12472	1770 aa		10.61	□□□□□ -0.71
PTC7	YHR076W	TY2B-OR2	Q12501	1770 aa		10.61	□□□□□ -0.71
PTC7	YHR076W	YTA7	P40340	1379 aa		10.6	□□□□□ -0.71
PTC7	YHR076W	TIF11	P38912	153 aa	Known RBP	10.59	□□□□□ -0.71
PTC7	YHR076W	SMC4	Q12267	1418 aa		10.58	□□□□□ -0.72
PTC7	YHR076W	CHD1	P32657	1468 aa		10.57	□□□□□ -0.72
PTC7	YHR076W	REF2	P42073	533 aa	Predicted RBP	10.57	□□□□□ -0.72
PTC7	YHR076W	ULI1	P43604	169 aa		10.56	□□□□□ -0.72
PTC7	YHR076W	MYO4	P32492	1471 aa		10.54	□□□□□ -0.72
PTC7	YHR076W	TY1B-DR3	Q99231	1755 aa		10.53	□□□□□ -0.72
PTC7	YHR076W	SIS1	P25294	352 aa	Known RBP	10.52	□□□□□ -0.73
PTC7	YHR076W	PBS2	P08018	668 aa		10.51	□□□□□ -0.73
PTC7	YHR076W	TY2B-B	Q12491	1770 aa		10.51	□□□□□ -0.73
PTC7	YHR076W	TRP5	P00931	707 aa	Known RBP	10.5	□□□□□ -0.73
PTC7	YHR076W	CDC25	P04821	1589 aa		10.49	□□□□□ -0.73
PTC7	YHR076W	YGR273C	P53329	174 aa		10.49	□□□□□ -0.73
PTC7	YHR076W	TY1B-BR	Q12193	1756 aa		10.48	□□□□□ -0.73
PTC7	YHR076W	TY1B-GR3	Q12316	1755 aa		10.48	□□□□□ -0.73
PTC7	YHR076W	TY1B-OR	Q92393	1755 aa		10.48	□□□□□ -0.73
PTC7	YHR076W	YEL023C	P39992	682 aa		10.48	□□□□□ -0.73
PTC7	YHR076W	MAK21	Q12176	1025 aa	Known RBP	10.47	□□□□□ -0.73
PTC7	YHR076W	MMS22	Q06164	1454 aa		10.47	□□□□□ -0.73
PTC7	YHR076W	LEU3	P08638	886 aa		10.46	□□□□□ -0.73
PTC7	YHR076W	KIC1	P38692	1080 aa		10.46	□□□□□ -0.73
PTC7	YHR076W	VHR2	P40041	505 aa		10.46	□□□□□ -0.73
PTC7	YHR076W	JIP4	Q03361	876 aa		10.46	□□□□□ -0.73
PTC7	YHR076W	TY1B-H	O13535	1793 aa		10.46	□□□□□ -0.74
PTC7	YHR076W	TY1B-DR5	P0C2I2	1755 aa		10.46	□□□□□ -0.74
PTC7	YHR076W	TY1B-DR6	P0C2I3	1755 aa		10.46	□□□□□ -0.74
PTC7	YHR076W	TY1B-LR2	P0C2I5	1755 aa		10.46	□□□□□ -0.74
PTC7	YHR076W	TY1B-LR3	P0C2I6	1755 aa	Known RBP	10.46	□□□□□ -0.74
PTC7	YHR076W	TY1B-PR1	P0C2I9	1755 aa	Known RBP	10.46	□□□□□ -0.74
PTC7	YHR076W	TY1B-PR2	P0C2J0	1756 aa		10.46	□□□□□ -0.74
PTC7	YHR076W	TY1B-PR3	P0C2J1	1755 aa	Known RBP	10.46	□□□□□ -0.74
PTC7	YHR076W	TY1B-JR1	P47098	1755 aa		10.46	□□□□□ -0.74
PTC7	YHR076W	TY1B-ML2	Q03434	1755 aa	Known RBP	10.46	□□□□□ -0.74
PTC7	YHR076W	TY1B-ER1	Q03612	1755 aa		10.46	□□□□□ -0.74
PTC7	YHR076W	TY1B-ML1	Q04711	1755 aa	Known RBP	10.46	□□□□□ -0.74
PTC7	YHR076W	TY1B-GR2	Q12269	1755 aa		10.46	□□□□□ -0.74
PTC7	YHR076W	TY1B-OL	Q12273	1755 aa		10.46	□□□□□ -0.74
PTC7	YHR076W	TY1B-PL	Q12414	1755 aa	Known RBP	10.46	□□□□□ -0.74
PTC7	YHR076W	PTC4	P38089	393 aa		10.44	□□□□□ -0.74
PTC7	YHR076W	PAN1	P32521	1480 aa		10.42	□□□□□ -0.74
PTC7	YHR076W	DSF2	P38213	736 aa		10.41	□□□□□ -0.74
PTC7	YHR076W	MAM3	Q12296	706 aa		10.41	□□□□□ -0.74
PTC7	YHR076W	LDB19	Q12502	818 aa		10.41	□□□□□ -0.74
PTC7	YHR076W	TFG1	P41895	735 aa	Predicted RBP	10.4	□□□□□ -0.74
PTC7	YHR076W	YNL035C	P53962	389 aa	Known RBP	10.4	□□□□□ -0.74
PTC7	YHR076W	IOC2	Q12072	812 aa		10.4	□□□□□ -0.74
PTC7	YHR076W	SPP41	P38904	1435 aa		10.4	□□□□□ -0.75
PTC7	YHR076W	ESC1	Q03661	1658 aa	Known RBP	10.39	□□□□□ -0.75
PTC7	YHR076W	COX6	P00427	148 aa		10.39	□□□□□ -0.75
PTC7	YHR076W	AI4	P03878	556 aa		10.39	□□□□□ -0.75
PTC7	YHR076W	SOL3	P38858	249 aa		10.39	□□□□□ -0.75

Retrieved 100 of 5,963 RNA–protein pairs in 24.3 ms