RNA–Protein interactions for RNA: YFL049W

SWP82, Transcript of Member of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SWP82, Length 1,872 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWP82YFL049W SOL3P38858 249 aa6.05□□□□□ -1.44
SWP82YFL049W INO80P53115 1489 aa6.04□□□□□ -1.44
SWP82YFL049W GUT1P32190 709 aa6.04□□□□□ -1.44
SWP82YFL049W UBP9P39967 754 aa6.04□□□□□ -1.44
SWP82YFL049W CKB1P43639 278 aa6.04□□□□□ -1.44
SWP82YFL049W ATH1P48016 1211 aa6.04□□□□□ -1.44
SWP82YFL049W MSB4Q12317 492 aa6.03□□□□□ -1.44
SWP82YFL049W DCW1P36091 449 aa6.02□□□□□ -1.44
SWP82YFL049W NST1P53935 1240 aa6.02□□□□□ -1.44
SWP82YFL049W MON2P48563 1636 aaPredicted RBP6.02□□□□□ -1.45
SWP82YFL049W YML020WQ03722 664 aa6.01□□□□□ -1.45
SWP82YFL049W TIF11P38912 153 aaKnown RBP5.99□□□□□ -1.45
SWP82YFL049W TRP5P00931 707 aaKnown RBP5.98□□□□□ -1.45
SWP82YFL049W SPP1Q03012 353 aa5.98□□□□□ -1.45
SWP82YFL049W YGR273CP53329 174 aa5.98□□□□□ -1.45
SWP82YFL049W IOC2Q12072 812 aa5.98□□□□□ -1.45
SWP82YFL049W HTA1P04911 132 aaKnown RBP5.97□□□□□ -1.45
SWP82YFL049W HTA2P04912 132 aa5.97□□□□□ -1.45
SWP82YFL049W UBP14P38237 781 aaKnown RBP5.97□□□□□ -1.45
SWP82YFL049W ULI1P43604 169 aa5.97□□□□□ -1.45
SWP82YFL049W SIS1P25294 352 aaKnown RBP5.96□□□□□ -1.45
SWP82YFL049W ILV3P39522 585 aaKnown RBP5.96□□□□□ -1.45
SWP82YFL049W REF2P42073 533 aaPredicted RBP5.96□□□□□ -1.45
SWP82YFL049W VHR2P40041 505 aa5.96□□□□□ -1.46
SWP82YFL049W NOP8Q08287 484 aaPredicted RBP5.96□□□□□ -1.46
SWP82YFL049W EAP1P36041 632 aaKnown RBP5.95□□□□□ -1.46
SWP82YFL049W YLR326WQ06170 240 aaKnown RBP5.95□□□□□ -1.46
SWP82YFL049W SGS1P35187 1447 aa5.94□□□□□ -1.46
SWP82YFL049W PBS2P08018 668 aa5.94□□□□□ -1.46
SWP82YFL049W YDR090CQ03193 310 aa5.94□□□□□ -1.46
SWP82YFL049W SPB4P25808 606 aaPredicted RBP5.94□□□□□ -1.46
SWP82YFL049W YEL023CP39992 682 aa5.94□□□□□ -1.46
SWP82YFL049W DSF2P38213 736 aa5.93□□□□□ -1.46
SWP82YFL049W KEX1P09620 729 aa5.92□□□□□ -1.46
SWP82YFL049W DAN4P47179 1161 aa5.91□□□□□ -1.46
SWP82YFL049W LDB19Q12502 818 aa5.91□□□□□ -1.46
SWP82YFL049W TCB3Q03640 1545 aaKnown RBP5.91□□□□□ -1.46
SWP82YFL049W MPH3P0CE00 602 aa5.9□□□□□ -1.46
SWP82YFL049W COX6P00427 148 aa5.89□□□□□ -1.47
SWP82YFL049W AI4P03878 556 aa5.89□□□□□ -1.47
SWP82YFL049W PTC4P38089 393 aa5.89□□□□□ -1.47
SWP82YFL049W PCS60P38137 543 aaKnown RBP RIP-Chip data5.89□□□□□ -1.47not detected
SWP82YFL049W KIN1P13185 1064 aa5.87□□□□□ -1.47
SWP82YFL049W SLX8P40072 274 aa5.87□□□□□ -1.47
SWP82YFL049W YNL035CP53962 389 aaKnown RBP5.87□□□□□ -1.47
SWP82YFL049W JIP4Q03361 876 aa5.87□□□□□ -1.47
SWP82YFL049W RTG1P32607 177 aa5.86□□□□□ -1.47
SWP82YFL049W MAK21Q12176 1025 aaKnown RBP5.85□□□□□ -1.47
SWP82YFL049W RAD54P32863 898 aa5.85□□□□□ -1.47
SWP82YFL049W IES2P40154 320 aa5.85□□□□□ -1.47
SWP82YFL049W FKH1P40466 484 aa5.85□□□□□ -1.47
SWP82YFL049W NUP42P49686 430 aaKnown RBP5.85□□□□□ -1.47
SWP82YFL049W MAM3Q12296 706 aa5.85□□□□□ -1.47
SWP82YFL049W SLI15P38283 698 aa5.84□□□□□ -1.47
SWP82YFL049W TY1B-DR4Q07793 1604 aa5.83□□□□□ -1.48
SWP82YFL049W SWR1Q05471 1514 aa5.82□□□□□ -1.48
SWP82YFL049W DIT2P21595 489 aa5.82□□□□□ -1.48
SWP82YFL049W SEC61P32915 480 aa5.82□□□□□ -1.48
SWP82YFL049W MID1P41821 548 aa5.82□□□□□ -1.48
SWP82YFL049W PML39Q03760 334 aa5.81□□□□□ -1.48
SWP82YFL049W AIR2Q12476 344 aaKnown RBP5.81□□□□□ -1.48
SWP82YFL049W KIC1P38692 1080 aa5.79□□□□□ -1.48
SWP82YFL049W ORC6P38826 435 aa5.79□□□□□ -1.48
SWP82YFL049W NCR1Q12200 1170 aa5.79□□□□□ -1.48
SWP82YFL049W GEF1P37020 779 aa5.78□□□□□ -1.48
SWP82YFL049W GUA1P38625 525 aaKnown RBP5.78□□□□□ -1.48
SWP82YFL049W TOP1P04786 769 aa5.77□□□□□ -1.49
SWP82YFL049W YDR344CQ05510 147 aa5.77□□□□□ -1.49
SWP82YFL049W CDC73Q06697 393 aa5.77□□□□□ -1.49
SWP82YFL049W MRX12P47084 519 aa5.77□□□□□ -1.49
SWP82YFL049W SNU71P53207 620 aaKnown RBP5.77□□□□□ -1.49
SWP82YFL049W SUB2Q07478 446 aaKnown RBP5.77□□□□□ -1.49
SWP82YFL049W SSA1P10591 642 aaKnown RBP5.76□□□□□ -1.49
SWP82YFL049W GAP1P19145 602 aaPredicted RBP5.76□□□□□ -1.49
SWP82YFL049W YNR021WP53723 404 aaKnown RBP5.76□□□□□ -1.49
SWP82YFL049W GLC3P32775 704 aa5.75□□□□□ -1.49
SWP82YFL049W MPC54Q08550 464 aa5.75□□□□□ -1.49
SWP82YFL049W DNA2P38859 1522 aa5.75□□□□□ -1.49
SWP82YFL049W YDL129WQ07555 291 aa5.75□□□□□ -1.49
SWP82YFL049W NOP7P53261 605 aaKnown RBP5.74□□□□□ -1.49
SWP82YFL049W ATG36P46983 293 aa5.72□□□□□ -1.49
SWP82YFL049W YRB30P53107 440 aaPredicted RBP5.72□□□□□ -1.49
SWP82YFL049W PEX29Q03370 554 aa5.72□□□□□ -1.49
SWP82YFL049W RGR1P19263 1082 aa5.71□□□□□ -1.5
SWP82YFL049W SAP30P38429 201 aa5.71□□□□□ -1.5
SWP82YFL049W BRL1P38770 471 aa5.71□□□□□ -1.5
SWP82YFL049W DPL1Q05567 589 aa5.71□□□□□ -1.5
SWP82YFL049W PSE1P32337 1089 aaKnown RBP5.71□□□□□ -1.5
SWP82YFL049W PAM1P37304 830 aaKnown RBP5.71□□□□□ -1.5
SWP82YFL049W MVP1P40959 511 aaKnown RBP5.71□□□□□ -1.5
SWP82YFL049W TFG1P41895 735 aaPredicted RBP5.71□□□□□ -1.5
SWP82YFL049W HGH1P48362 394 aaKnown RBP5.71□□□□□ -1.5
SWP82YFL049W KOG1P38873 1557 aa5.7□□□□□ -1.5
SWP82YFL049W HSL1P34244 1518 aa5.68□□□□□ -1.5
SWP82YFL049W SPT6P23615 1451 aaKnown RBP5.68□□□□□ -1.5
SWP82YFL049W NMA111P53920 997 aa5.68□□□□□ -1.5
SWP82YFL049W CSC1Q06538 782 aa5.68□□□□□ -1.5
SWP82YFL049W LAM6Q08001 693 aa5.68□□□□□ -1.5
SWP82YFL049W AIM7Q12156 149 aa5.68□□□□□ -1.5
SWP82YFL049W MET10P39692 1035 aa5.66□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 11.3 ms