RNA–Protein interactions for RNA: YER038C

KRE29, Transcript of Subunit of the SMC5-SMC6 complex, yeastyeast

Gene KRE29, Length 1,395 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
KRE29YER038C GRE2Q12068 342 aaKnown RBP8.33□□□□□ -1.08
KRE29YER038C PTC4P38089 393 aa8.3□□□□□ -1.08
KRE29YER038C ATH1P48016 1211 aa8.3□□□□□ -1.08
KRE29YER038C YEL023CP39992 682 aa8.29□□□□□ -1.08
KRE29YER038C MON2P48563 1636 aaPredicted RBP8.26□□□□□ -1.09
KRE29YER038C DAN4P47179 1161 aa8.25□□□□□ -1.09
KRE29YER038C GUT1P32190 709 aa8.24□□□□□ -1.09
KRE29YER038C PTC3P34221 468 aaKnown RBP8.24□□□□□ -1.09
KRE29YER038C SAP30P38429 201 aa8.24□□□□□ -1.09
KRE29YER038C YDL129WQ07555 291 aa8.24□□□□□ -1.09
KRE29YER038C COQ8P27697 501 aa8.23□□□□□ -1.09
KRE29YER038C INO80P53115 1489 aa8.23□□□□□ -1.09
KRE29YER038C EDS1P38073 919 aa8.2□□□□□ -1.1
KRE29YER038C NOP53Q12080 455 aaKnown RBP8.15□□□□□ -1.1
KRE29YER038C PML39Q03760 334 aa8.13□□□□□ -1.11
KRE29YER038C CHL1P22516 861 aaPredicted RBP8.12□□□□□ -1.11
KRE29YER038C PRE3P38624 215 aa8.1□□□□□ -1.11
KRE29YER038C ELP4Q02884 456 aaKnown RBP8.06□□□□□ -1.12
KRE29YER038C PEX29Q03370 554 aa8.05□□□□□ -1.12
KRE29YER038C AI4P03878 556 aa8.04□□□□□ -1.12
KRE29YER038C BCK2P33306 851 aa8.04□□□□□ -1.12
KRE29YER038C MPH3P0CE00 602 aa8.03□□□□□ -1.12
KRE29YER038C SOL3P38858 249 aa8.01□□□□□ -1.13
KRE29YER038C SET1P38827 1080 aaKnown RBP8□□□□□ -1.13
KRE29YER038C MID1P41821 548 aa7.99□□□□□ -1.13
KRE29YER038C YGR273CP53329 174 aa7.99□□□□□ -1.13
KRE29YER038C NST1P53935 1240 aa7.98□□□□□ -1.13
KRE29YER038C ARH1P48360 493 aa7.97□□□□□ -1.13
KRE29YER038C VRP1P37370 817 aa7.93□□□□□ -1.14
KRE29YER038C SPT23P35210 1082 aa7.91□□□□□ -1.14
KRE29YER038C TCB3Q03640 1545 aaKnown RBP7.91□□□□□ -1.14
KRE29YER038C SWR1Q05471 1514 aa7.91□□□□□ -1.14
KRE29YER038C HAP5Q02516 242 aa7.9□□□□□ -1.14
KRE29YER038C TY1B-DR4Q07793 1604 aa7.89□□□□□ -1.15
KRE29YER038C IFH1P39520 1085 aa7.89□□□□□ -1.15
KRE29YER038C ILV3P39522 585 aaKnown RBP7.88□□□□□ -1.15
KRE29YER038C YDR344CQ05510 147 aa7.88□□□□□ -1.15
KRE29YER038C XDJ1P39102 459 aa7.86□□□□□ -1.15
KRE29YER038C MPC54Q08550 464 aa7.86□□□□□ -1.15
KRE29YER038C DNA2P38859 1522 aa7.86□□□□□ -1.15
KRE29YER038C SGS1P35187 1447 aa7.86□□□□□ -1.15
KRE29YER038C SLI15P38283 698 aa7.85□□□□□ -1.15
KRE29YER038C KEX1P09620 729 aa7.84□□□□□ -1.15
KRE29YER038C DPL1Q05567 589 aa7.84□□□□□ -1.16
KRE29YER038C RPP1BP10622 106 aaKnown RBP7.83□□□□□ -1.16
KRE29YER038C PTC2P39966 464 aaKnown RBP7.83□□□□□ -1.16
KRE29YER038C BNI4P53858 892 aa7.83□□□□□ -1.16
KRE29YER038C NMA111P53920 997 aa7.83□□□□□ -1.16
KRE29YER038C VHR2P40041 505 aa7.82□□□□□ -1.16
KRE29YER038C RAD54P32863 898 aa7.78□□□□□ -1.16
KRE29YER038C KIC1P38692 1080 aa7.78□□□□□ -1.16
KRE29YER038C UBP14P38237 781 aaKnown RBP7.77□□□□□ -1.17
KRE29YER038C YML082WQ04533 649 aaKnown RBP7.77□□□□□ -1.17
KRE29YER038C ISU2Q12056 156 aa7.77□□□□□ -1.17
KRE29YER038C KOG1P38873 1557 aa7.76□□□□□ -1.17
KRE29YER038C YLR326WQ06170 240 aaKnown RBP7.76□□□□□ -1.17
KRE29YER038C PCS60P38137 543 aaKnown RBP RIP-Chip data7.71□□□□□ -1.17not detected
KRE29YER038C CDC73Q06697 393 aa7.71□□□□□ -1.17
KRE29YER038C REF2P42073 533 aaPredicted RBP7.71□□□□□ -1.18
KRE29YER038C DPS1P04802 557 aaKnown RBP7.7□□□□□ -1.18
KRE29YER038C VPS70P47161 811 aa7.69□□□□□ -1.18
KRE29YER038C YPR148CQ06523 435 aa7.69□□□□□ -1.18
KRE29YER038C PEX21P50091 288 aa7.68□□□□□ -1.18
KRE29YER038C GYP1Q08484 637 aa7.63□□□□□ -1.19
KRE29YER038C HSL1P34244 1518 aa7.63□□□□□ -1.19
KRE29YER038C YDR090CQ03193 310 aa7.62□□□□□ -1.19
KRE29YER038C MAK21Q12176 1025 aaKnown RBP7.62□□□□□ -1.19
KRE29YER038C SPT6P23615 1451 aaKnown RBP7.61□□□□□ -1.19
KRE29YER038C CSC1Q06538 782 aa7.59□□□□□ -1.2
KRE29YER038C TFB4Q12004 338 aa7.58□□□□□ -1.2
KRE29YER038C COX6P00427 148 aa7.57□□□□□ -1.2
KRE29YER038C PDR1P12383 1068 aa7.57□□□□□ -1.2
KRE29YER038C RAM1P22007 431 aa7.57□□□□□ -1.2
KRE29YER038C SAS4Q04003 481 aa7.57□□□□□ -1.2
KRE29YER038C YPR015CQ12531 247 aa7.57□□□□□ -1.2
KRE29YER038C CKB1P43639 278 aa7.56□□□□□ -1.2
KRE29YER038C YRR1Q12172 810 aa7.56□□□□□ -1.2
KRE29YER038C TUM1Q08686 304 aaKnown RBP7.54□□□□□ -1.2
KRE29YER038C SPA2P23201 1466 aaKnown RBP7.53□□□□□ -1.2
KRE29YER038C NPL4P33755 580 aa7.53□□□□□ -1.2
KRE29YER038C MRF1P30775 413 aaPredicted RBP7.51□□□□□ -1.21
KRE29YER038C DMA1P38823 416 aa7.51□□□□□ -1.21
KRE29YER038C GAP1P19145 602 aaPredicted RBP7.48□□□□□ -1.21
KRE29YER038C ORC6P38826 435 aa7.48□□□□□ -1.21
KRE29YER038C PRT1P06103 763 aaKnown RBP7.47□□□□□ -1.21
KRE29YER038C PBS2P08018 668 aa7.47□□□□□ -1.21
KRE29YER038C HIR3P47171 1648 aa7.46□□□□□ -1.21
KRE29YER038C NUD1P32336 851 aa7.46□□□□□ -1.21
KRE29YER038C YEL077CQ3E7X8 1277 aa7.46□□□□□ -1.21
KRE29YER038C AMS1P22855 1083 aa7.46□□□□□ -1.22
KRE29YER038C MVP1P40959 511 aaKnown RBP7.45□□□□□ -1.22
KRE29YER038C BUD20Q08004 166 aaPredicted RBP7.45□□□□□ -1.22
KRE29YER038C RAS1P01119 309 aa7.44□□□□□ -1.22
KRE29YER038C YPR109WQ06104 294 aa7.43□□□□□ -1.22
KRE29YER038C ERG12P07277 443 aa7.42□□□□□ -1.22
KRE29YER038C GCD11P32481 527 aaKnown RBP7.42□□□□□ -1.22
KRE29YER038C ISM1P48526 1002 aa7.42□□□□□ -1.22
KRE29YER038C STR2P47164 639 aa7.41□□□□□ -1.22
KRE29YER038C ECM5Q03214 1411 aa7.4□□□□□ -1.22
KRE29YER038C RGR1P19263 1082 aa7.4□□□□□ -1.22
Retrieved 100 of 5,963 RNA–protein pairs in 31.1 ms