RNA–Protein interactions for RNA: YER038C

KRE29, Transcript of Subunit of the SMC5-SMC6 complex, yeastyeast

Gene KRE29, Length 1,395 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
KRE29YER038C MTC1P47018 478 aaKnown RBP14.03□□□□□ -0.16
KRE29YER038C DRS1P32892 752 aaKnown RBP13.14□□□□□ -0.31
KRE29YER038C FAP1P53971 965 aa12.76□□□□□ -0.37
KRE29YER038C PRY3P47033 881 aa11.94□□□□□ -0.5
KRE29YER038C PRI1P10363 409 aa11.82□□□□□ -0.52
KRE29YER038C AAD16Q02895 342 aa11.8□□□□□ -0.52
KRE29YER038C ISW2Q08773 1120 aa11.73□□□□□ -0.53
KRE29YER038C RPG1P38249 964 aaKnown RBP11.54□□□□□ -0.56
KRE29YER038C DIP2Q12220 943 aaPredicted RBP11.52□□□□□ -0.57
KRE29YER038C HAA1Q12753 694 aaKnown RBP11.23□□□□□ -0.61
KRE29YER038C TSR3Q12094 313 aaKnown RBP11.19□□□□□ -0.62
KRE29YER038C RSE1Q04693 1361 aaKnown RBP11.17□□□□□ -0.62
KRE29YER038C YCK3P39962 524 aa11.03□□□□□ -0.64
KRE29YER038C AVT3P36062 692 aa11.01□□□□□ -0.65
KRE29YER038C BFR2Q06631 534 aaKnown RBP10.94□□□□□ -0.66
KRE29YER038C MRPL32P25348 183 aa10.84□□□□□ -0.67
KRE29YER038C REB1P21538 810 aa10.82□□□□□ -0.68
KRE29YER038C RPL17AP05740 184 aaKnown RBP10.79□□□□□ -0.68
KRE29YER038C RPL17BP46990 184 aaKnown RBP10.79□□□□□ -0.68
KRE29YER038C YGL015CP33199 130 aa10.4□□□□□ -0.74
KRE29YER038C SPT21P35209 758 aa10.2□□□□□ -0.78
KRE29YER038C CDC27P38042 758 aa10.14□□□□□ -0.79
KRE29YER038C YKR023WP36119 530 aaKnown RBP10.13□□□□□ -0.79
KRE29YER038C HOP09932 586 aa9.96□□□□□ -0.82
KRE29YER038C UBP10P53874 792 aaPredicted RBP9.96□□□□□ -0.82
KRE29YER038C TFC8Q12308 588 aa9.95□□□□□ -0.82
KRE29YER038C RIM101P33400 625 aa9.89□□□□□ -0.83
KRE29YER038C DCD1P06773 312 aa9.88□□□□□ -0.83
KRE29YER038C MAP2P38174 421 aaKnown RBP9.88□□□□□ -0.83
KRE29YER038C SCY1P53009 804 aa9.71□□□□□ -0.86
KRE29YER038C TIF4632P39936 914 aaKnown RBP9.64□□□□□ -0.87
KRE29YER038C SLX5P32828 619 aaKnown RBP9.63□□□□□ -0.87
KRE29YER038C BCH2P36122 765 aa9.63□□□□□ -0.87
KRE29YER038C TFA1P36100 482 aa9.62□□□□□ -0.87
KRE29YER038C YIL055CP40523 627 aaKnown RBP9.59□□□□□ -0.87
KRE29YER038C PTP3P40048 928 aa9.54□□□□□ -0.88
KRE29YER038C OXP1P28273 1286 aa9.53□□□□□ -0.88
KRE29YER038C TGL3P40308 642 aa9.52□□□□□ -0.88
KRE29YER038C BUD31P25337 157 aaPredicted RBP9.46□□□□□ -0.9
KRE29YER038C EPS1P40557 701 aa9.39□□□□□ -0.91
KRE29YER038C BDF1P35817 686 aa9.36□□□□□ -0.91
KRE29YER038C BBC1P47068 1157 aa9.36□□□□□ -0.91
KRE29YER038C YAH1Q12184 172 aaKnown RBP9.36□□□□□ -0.91
KRE29YER038C RSM7P47150 247 aa9.35□□□□□ -0.91
KRE29YER038C UBP9P39967 754 aa9.33□□□□□ -0.92
KRE29YER038C AI2P03876 854 aa9.25□□□□□ -0.93
KRE29YER038C YOR238WQ08634 303 aa9.13□□□□□ -0.95
KRE29YER038C SIS1P25294 352 aaKnown RBP9.12□□□□□ -0.95
KRE29YER038C YLR271WQ06152 274 aa9.12□□□□□ -0.95
KRE29YER038C ARP8Q12386 881 aaKnown RBP RIP-Chip data9.12□□□□□ -0.95not detected
KRE29YER038C SSP1P38871 571 aa9.08□□□□□ -0.96
KRE29YER038C YAP5P40574 245 aa9.06□□□□□ -0.96
KRE29YER038C MST1P07236 462 aa9.05□□□□□ -0.96
KRE29YER038C NSR1P27476 414 aaKnown RBP RIP-Chip data9.05□□□□□ -0.96not detected
KRE29YER038C PSD2P53037 1138 aaKnown RBP8.98□□□□□ -0.97
KRE29YER038C YBL029C-AQ3E756 94 aa8.94□□□□□ -0.98
KRE29YER038C GTT3P39996 337 aa8.92□□□□□ -0.98
KRE29YER038C MRM1P25270 412 aa8.91□□□□□ -0.98
KRE29YER038C MGA2P40578 1113 aa8.86□□□□□ -0.99
KRE29YER038C VNX1P42839 908 aa8.86□□□□□ -0.99
KRE29YER038C WSC3Q12215 556 aa8.86□□□□□ -0.99
KRE29YER038C SPP1Q03012 353 aa8.84□□□□□ -0.99
KRE29YER038C CST9Q06032 482 aa8.78□□□□□ -1
KRE29YER038C PIB1Q06651 286 aa8.78□□□□□ -1
KRE29YER038C RTG3P38165 486 aa8.77□□□□□ -1.01
KRE29YER038C TIF11P38912 153 aaKnown RBP8.73□□□□□ -1.01
KRE29YER038C YMR1P47147 688 aaKnown RBP RIP-Chip data8.73□□□□□ -1.01not detected
KRE29YER038C DBP1P24784 617 aaKnown RBP8.68□□□□□ -1.02
KRE29YER038C VPS29P38759 282 aa8.66□□□□□ -1.02
KRE29YER038C ULI1P43604 169 aa8.65□□□□□ -1.02
KRE29YER038C MSB4Q12317 492 aa8.65□□□□□ -1.02
KRE29YER038C EAP1P36041 632 aaKnown RBP8.63□□□□□ -1.03
KRE29YER038C YJL171CP46992 396 aa8.63□□□□□ -1.03
KRE29YER038C YFR006WP43590 535 aa8.62□□□□□ -1.03
KRE29YER038C LDB19Q12502 818 aa8.6□□□□□ -1.03
KRE29YER038C SET4P42948 560 aa8.58□□□□□ -1.04
KRE29YER038C STS1P38637 319 aa8.57□□□□□ -1.04
KRE29YER038C VMA1P17255 1071 aaKnown RBP8.56□□□□□ -1.04
KRE29YER038C YOL036WQ08206 761 aa8.56□□□□□ -1.04
KRE29YER038C RCR1P38212 213 aa8.55□□□□□ -1.04
KRE29YER038C FKH1P40466 484 aa8.54□□□□□ -1.04
KRE29YER038C IOC2Q12072 812 aa8.53□□□□□ -1.04
KRE29YER038C AIR2Q12476 344 aaKnown RBP8.53□□□□□ -1.04
KRE29YER038C SAM3Q08986 587 aa8.49□□□□□ -1.05
KRE29YER038C TRP5P00931 707 aaKnown RBP8.48□□□□□ -1.05
KRE29YER038C ABP1P15891 592 aaKnown RBP8.46□□□□□ -1.06
KRE29YER038C RTG1P32607 177 aa8.46□□□□□ -1.06
KRE29YER038C BMT6Q12291 365 aa8.46□□□□□ -1.06
KRE29YER038C GYP5Q12344 894 aa8.45□□□□□ -1.06
KRE29YER038C TFG1P41895 735 aaPredicted RBP8.44□□□□□ -1.06
KRE29YER038C YNL035CP53962 389 aaKnown RBP8.44□□□□□ -1.06
KRE29YER038C NCR1Q12200 1170 aa8.43□□□□□ -1.06
KRE29YER038C SEC61P32915 480 aa8.41□□□□□ -1.06
KRE29YER038C HTA1P04911 132 aaKnown RBP8.39□□□□□ -1.07
KRE29YER038C HTA2P04912 132 aa8.39□□□□□ -1.07
KRE29YER038C MAK11P20484 414 aaKnown RBP8.36□□□□□ -1.07
KRE29YER038C MIF2P35201 549 aa8.36□□□□□ -1.07
KRE29YER038C DCW1P36091 449 aa8.36□□□□□ -1.07
KRE29YER038C JIP4Q03361 876 aa8.36□□□□□ -1.07
KRE29YER038C RAM2P29703 316 aa8.33□□□□□ -1.08
Retrieved 100 of 5,963 RNA–protein pairs in 11.3 ms