RNA–Protein interactions for RNA: YDR192C

NUP42, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP42, Length 1,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP42YDR192C IES2P40154 320 aa8.13□□□□□ -1.11
NUP42YDR192C AIM7Q12156 149 aa8.11□□□□□ -1.11
NUP42YDR192C MSB4Q12317 492 aa8.1□□□□□ -1.11
NUP42YDR192C KIC1P38692 1080 aa8.09□□□□□ -1.11
NUP42YDR192C VHR2P40041 505 aa8.08□□□□□ -1.12
NUP42YDR192C YGR273CP53329 174 aa8.08□□□□□ -1.12
NUP42YDR192C YOL036WQ08206 761 aa8.08□□□□□ -1.12
NUP42YDR192C NUP42P49686 430 aaKnown RBP8.07□□□□□ -1.12
NUP42YDR192C UBP14P38237 781 aaKnown RBP8.06□□□□□ -1.12
NUP42YDR192C HTA1P04911 132 aaKnown RBP8.05□□□□□ -1.12
NUP42YDR192C HTA2P04912 132 aa8.05□□□□□ -1.12
NUP42YDR192C KIN1P13185 1064 aa8.05□□□□□ -1.12
NUP42YDR192C GLC3P32775 704 aa8.04□□□□□ -1.12
NUP42YDR192C YLR326WQ06170 240 aaKnown RBP8.04□□□□□ -1.12
NUP42YDR192C RAD54P32863 898 aa8.03□□□□□ -1.12
NUP42YDR192C HGH1P48362 394 aaKnown RBP8.03□□□□□ -1.12
NUP42YDR192C YDR090CQ03193 310 aa8.03□□□□□ -1.12
NUP42YDR192C DNA2P38859 1522 aa8.03□□□□□ -1.12
NUP42YDR192C DIT2P21595 489 aa8.02□□□□□ -1.13
NUP42YDR192C EAP1P36041 632 aaKnown RBP8.02□□□□□ -1.13
NUP42YDR192C DCW1P36091 449 aa8.02□□□□□ -1.13
NUP42YDR192C SET4P42948 560 aa8.02□□□□□ -1.13
NUP42YDR192C ATF2P53296 535 aa8.02□□□□□ -1.13
NUP42YDR192C KEX1P09620 729 aa8.01□□□□□ -1.13
NUP42YDR192C BUD31P25337 157 aaPredicted RBP7.99□□□□□ -1.13
NUP42YDR192C DMA2P53924 522 aa7.99□□□□□ -1.13
NUP42YDR192C AI4P03878 556 aa7.98□□□□□ -1.13
NUP42YDR192C SOL3P38858 249 aa7.98□□□□□ -1.13
NUP42YDR192C PSE1P32337 1089 aaKnown RBP7.97□□□□□ -1.13
NUP42YDR192C MPH3P0CE00 602 aa7.96□□□□□ -1.14
NUP42YDR192C RPP1BP10622 106 aaKnown RBP7.95□□□□□ -1.14
NUP42YDR192C PCS60P38137 543 aaKnown RBP RIP-Chip data7.95□□□□□ -1.14 RIP-Chip
NUP42YDR192C NST1P53935 1240 aa7.95□□□□□ -1.14
NUP42YDR192C WSC3Q12215 556 aa7.95□□□□□ -1.14
NUP42YDR192C UBP9P39967 754 aa7.93□□□□□ -1.14
NUP42YDR192C YEL023CP39992 682 aa7.93□□□□□ -1.14
NUP42YDR192C JIP4Q03361 876 aa7.91□□□□□ -1.14
NUP42YDR192C PTC4P38089 393 aa7.9□□□□□ -1.14
NUP42YDR192C CLB5P30283 435 aa7.88□□□□□ -1.15
NUP42YDR192C ORC6P38826 435 aa7.88□□□□□ -1.15
NUP42YDR192C TIF11P38912 153 aaKnown RBP7.88□□□□□ -1.15
NUP42YDR192C VNX1P42839 908 aa7.88□□□□□ -1.15
NUP42YDR192C DAN4P47179 1161 aa7.88□□□□□ -1.15
NUP42YDR192C YBL029C-AQ3E756 94 aa7.88□□□□□ -1.15
NUP42YDR192C TRP5P00931 707 aaKnown RBP7.87□□□□□ -1.15
NUP42YDR192C HPC2Q01448 625 aa7.86□□□□□ -1.15
NUP42YDR192C SSA2P10592 639 aaKnown RBP7.85□□□□□ -1.15
NUP42YDR192C ULI1P43604 169 aa7.85□□□□□ -1.15
NUP42YDR192C ILV3P39522 585 aaKnown RBP7.84□□□□□ -1.15
NUP42YDR192C TEA1P47988 759 aa7.84□□□□□ -1.15
NUP42YDR192C SPP1Q03012 353 aa7.84□□□□□ -1.15
NUP42YDR192C CSC1Q06538 782 aa7.84□□□□□ -1.15
NUP42YDR192C RLF2Q12495 606 aa7.84□□□□□ -1.15
NUP42YDR192C GUA1P38625 525 aaKnown RBP7.83□□□□□ -1.16
NUP42YDR192C SWR1Q05471 1514 aa7.83□□□□□ -1.16
NUP42YDR192C SLI15P38283 698 aa7.82□□□□□ -1.16
NUP42YDR192C KOG1P38873 1557 aa7.8□□□□□ -1.16
NUP42YDR192C RGR1P19263 1082 aa7.8□□□□□ -1.16
NUP42YDR192C YNL035CP53962 389 aaKnown RBP7.8□□□□□ -1.16
NUP42YDR192C TFB4Q12004 338 aa7.8□□□□□ -1.16
NUP42YDR192C BRL1P38770 471 aa7.79□□□□□ -1.16
NUP42YDR192C MVP1P40959 511 aaKnown RBP7.79□□□□□ -1.16
NUP42YDR192C GAP1P19145 602 aaPredicted RBP7.78□□□□□ -1.16
NUP42YDR192C CSN12P47130 423 aa7.78□□□□□ -1.16
NUP42YDR192C PEX21P50091 288 aa7.78□□□□□ -1.16
NUP42YDR192C IOC2Q12072 812 aa7.77□□□□□ -1.17
NUP42YDR192C SEC61P32915 480 aa7.76□□□□□ -1.17
NUP42YDR192C TFG1P41895 735 aaPredicted RBP7.74□□□□□ -1.17
NUP42YDR192C YMR196WQ04336 1088 aa7.73□□□□□ -1.17
NUP42YDR192C DPL1Q05567 589 aa7.73□□□□□ -1.17
NUP42YDR192C TFB3Q03290 321 aa7.72□□□□□ -1.17
NUP42YDR192C PML39Q03760 334 aa7.72□□□□□ -1.17
NUP42YDR192C CDC73Q06697 393 aa7.72□□□□□ -1.17
NUP42YDR192C LDB19Q12502 818 aa7.72□□□□□ -1.17
NUP42YDR192C RTG1P32607 177 aa7.71□□□□□ -1.18
NUP42YDR192C PEX29Q03370 554 aa7.71□□□□□ -1.18
NUP42YDR192C YPR109WQ06104 294 aa7.71□□□□□ -1.18
NUP42YDR192C GLN1P32288 370 aaKnown RBP7.69□□□□□ -1.18
NUP42YDR192C MPC54Q08550 464 aa7.69□□□□□ -1.18
NUP42YDR192C HST2P53686 357 aa7.68□□□□□ -1.18
NUP42YDR192C NIS1P53939 407 aa7.67□□□□□ -1.18
NUP42YDR192C TUM1Q08686 304 aaKnown RBP7.67□□□□□ -1.18
NUP42YDR192C ISU2Q12056 156 aa7.67□□□□□ -1.18
NUP42YDR192C MID1P41821 548 aa7.66□□□□□ -1.18
NUP42YDR192C FPK1P53739 893 aa7.66□□□□□ -1.18
NUP42YDR192C YDL129WQ07555 291 aa7.66□□□□□ -1.18
NUP42YDR192C NCR1Q12200 1170 aa7.65□□□□□ -1.18
NUP42YDR192C SIT4P20604 311 aa7.64□□□□□ -1.19
NUP42YDR192C MMP1Q12372 583 aa7.64□□□□□ -1.19
NUP42YDR192C KTR1P27810 393 aaKnown RBP7.62□□□□□ -1.19
NUP42YDR192C RTF1P53064 558 aa7.62□□□□□ -1.19
NUP42YDR192C NMA111P53920 997 aa7.61□□□□□ -1.19
NUP42YDR192C TYW1Q08960 810 aaKnown RBP7.61□□□□□ -1.19
NUP42YDR192C YRR1Q12172 810 aa7.61□□□□□ -1.19
NUP42YDR192C PKC1P24583 1151 aa7.59□□□□□ -1.19
NUP42YDR192C CSE4P36012 229 aa7.59□□□□□ -1.19
NUP42YDR192C PKH3Q03306 898 aaPredicted RBP7.59□□□□□ -1.19
NUP42YDR192C YBL036CP38197 257 aa7.58□□□□□ -1.2
NUP42YDR192C NPL4P33755 580 aa7.57□□□□□ -1.2
NUP42YDR192C FKH1P40466 484 aa7.57□□□□□ -1.2
Retrieved 100 of 5,963 RNA–protein pairs in 79.5 ms