RNA–Protein interactions for RNA: YDL229W

SSB1, Transcript of Cytoplasmic ATPase that is a ribosome-associated molecular chaperone, yeastyeast

Gene SSB1, Length 1,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSB1YDL229W DAL5P15365 543 aa5.3□□□□□ -1.56
SSB1YDL229W NNF2P53253 936 aa5.3□□□□□ -1.56
SSB1YDL229W ECM16Q04217 1267 aaKnown RBP5.3□□□□□ -1.56
SSB1YDL229W HIR3P47171 1648 aa5.3□□□□□ -1.56
SSB1YDL229W KOG1P38873 1557 aa5.29□□□□□ -1.56
SSB1YDL229W MSH3P25336 1018 aa5.29□□□□□ -1.56
SSB1YDL229W TY1B-AO13527 1196 aaKnown RBP5.28□□□□□ -1.56
SSB1YDL229W SIC1P38634 284 aa5.28□□□□□ -1.56
SSB1YDL229W PEA2P40091 420 aa5.28□□□□□ -1.56
SSB1YDL229W SEC9P40357 651 aa5.27□□□□□ -1.57
SSB1YDL229W VPS72Q03388 795 aa5.27□□□□□ -1.57
SSB1YDL229W SAS10Q12136 610 aaPredicted RBP5.27□□□□□ -1.57
SSB1YDL229W TAF13P11747 167 aa5.27□□□□□ -1.57
SSB1YDL229W RRP14P36080 434 aaKnown RBP5.26□□□□□ -1.57
SSB1YDL229W RPN7Q06103 429 aaKnown RBP5.26□□□□□ -1.57
SSB1YDL229W LAM6Q08001 693 aa5.26□□□□□ -1.57
SSB1YDL229W MSH4P40965 878 aaPredicted RBP5.25□□□□□ -1.57
SSB1YDL229W LEM3P42838 414 aa5.25□□□□□ -1.57
SSB1YDL229W JSN1P47135 1091 aaKnown RBP RIP-Chip data5.25□□□□□ -1.57not detected
SSB1YDL229W SUP35P05453 685 aaKnown RBP5.25□□□□□ -1.57
SSB1YDL229W SAP190P36123 1033 aa5.25□□□□□ -1.57
SSB1YDL229W DMA2P53924 522 aa5.25□□□□□ -1.57
SSB1YDL229W NST1P53935 1240 aa5.25□□□□□ -1.57
SSB1YDL229W APL5Q08951 932 aaKnown RBP5.24□□□□□ -1.57
SSB1YDL229W OPY1P38271 328 aa5.23□□□□□ -1.57
SSB1YDL229W RAD26P40352 1085 aa5.23□□□□□ -1.57
SSB1YDL229W RSC8P43609 557 aaKnown RBP5.23□□□□□ -1.57
SSB1YDL229W YMR196WQ04336 1088 aa5.23□□□□□ -1.57
SSB1YDL229W XRN1P22147 1528 aaKnown RBP5.23□□□□□ -1.57
SSB1YDL229W LTV1P34078 463 aa5.23□□□□□ -1.57
SSB1YDL229W CTR9P89105 1077 aa5.23□□□□□ -1.57
SSB1YDL229W CDC11P32458 415 aa5.22□□□□□ -1.57
SSB1YDL229W BYE1P36106 594 aa5.22□□□□□ -1.57
SSB1YDL229W PRP3Q03338 469 aaPredicted RBP5.22□□□□□ -1.57
SSB1YDL229W ASF1P32447 279 aa5.21□□□□□ -1.58
SSB1YDL229W TAN1P53072 289 aaPredicted RBP5.2□□□□□ -1.58
SSB1YDL229W NOP8Q08287 484 aaPredicted RBP5.2□□□□□ -1.58
SSB1YDL229W BUD21Q08492 214 aaPredicted RBP5.2□□□□□ -1.58
SSB1YDL229W CFT2Q12102 859 aaPredicted RBP5.2□□□□□ -1.58
SSB1YDL229W YLL054CQ12244 843 aa5.2□□□□□ -1.58
SSB1YDL229W MTR4P47047 1073 aaKnown RBP5.2□□□□□ -1.58
SSB1YDL229W KIP3P53086 805 aaKnown RBP5.2□□□□□ -1.58
SSB1YDL229W RAD51P25454 400 aa5.19□□□□□ -1.58
SSB1YDL229W SSP1P38871 571 aa5.19□□□□□ -1.58
SSB1YDL229W AIM20P40451 204 aa5.19□□□□□ -1.58
SSB1YDL229W HOS4P40480 1083 aa5.19□□□□□ -1.58
SSB1YDL229W SEC20P28791 383 aa5.18□□□□□ -1.58
SSB1YDL229W DEP1P31385 405 aa5.18□□□□□ -1.58
SSB1YDL229W CBF5P33322 483 aaKnown RBP RIP-Chip data5.18□□□□□ -1.58not detected
SSB1YDL229W PAF1P38351 445 aa5.18□□□□□ -1.58
SSB1YDL229W OSW7P43611 510 aa5.18□□□□□ -1.58
SSB1YDL229W PET111P08468 800 aa5.18□□□□□ -1.58
SSB1YDL229W STH1P32597 1359 aa5.18□□□□□ -1.58
SSB1YDL229W LEU3P08638 886 aa5.17□□□□□ -1.58
SSB1YDL229W HSC82P15108 705 aaKnown RBP5.17□□□□□ -1.58
SSB1YDL229W PIM1P36775 1133 aa5.17□□□□□ -1.58
SSB1YDL229W DJP1P40564 432 aa5.17□□□□□ -1.58
SSB1YDL229W SMC3P47037 1230 aa5.17□□□□□ -1.58
SSB1YDL229W RTS3P53289 263 aa5.17□□□□□ -1.58
SSB1YDL229W ALD3P54114 506 aa5.17□□□□□ -1.58
SSB1YDL229W RCF1Q03713 159 aa5.17□□□□□ -1.58
SSB1YDL229W EAF7P53911 425 aaKnown RBP5.16□□□□□ -1.58
SSB1YDL229W REV3P14284 1504 aa5.16□□□□□ -1.58
SSB1YDL229W RPC82P32349 654 aa5.16□□□□□ -1.58
SSB1YDL229W VID30P53076 958 aa5.16□□□□□ -1.58
SSB1YDL229W PAP2P53632 584 aaKnown RBP5.16□□□□□ -1.58
SSB1YDL229W CEF1Q03654 590 aaPredicted RBP5.16□□□□□ -1.58
SSB1YDL229W AIM21P40563 679 aa5.15□□□□□ -1.59
SSB1YDL229W PKH1Q03407 766 aa5.15□□□□□ -1.59
SSB1YDL229W PSR1Q07800 427 aa5.15□□□□□ -1.59
SSB1YDL229W BMS1Q08965 1183 aaKnown RBP5.15□□□□□ -1.59
SSB1YDL229W CLF1Q12309 687 aaPredicted RBP5.15□□□□□ -1.59
SSB1YDL229W VPS5Q92331 675 aa5.15□□□□□ -1.59
SSB1YDL229W THO2P53552 1597 aaKnown RBP5.15□□□□□ -1.59
SSB1YDL229W BUD4P47136 1447 aa5.14□□□□□ -1.59
SSB1YDL229W PRS1P32895 427 aaKnown RBP5.14□□□□□ -1.59
SSB1YDL229W DSN1P40568 576 aa5.14□□□□□ -1.59
SSB1YDL229W ZDS1P50111 915 aaKnown RBP5.14□□□□□ -1.59
SSB1YDL229W RRP15Q06511 250 aaPredicted RBP5.14□□□□□ -1.59
SSB1YDL229W NFI1Q12216 726 aa5.14□□□□□ -1.59
SSB1YDL229W YJR008WP47085 338 aa5.13□□□□□ -1.59
SSB1YDL229W YDR341CQ05506 607 aaKnown RBP5.13□□□□□ -1.59
SSB1YDL229W PSK2Q08217 1101 aa5.13□□□□□ -1.59
SSB1YDL229W ECM5Q03214 1411 aa5.13□□□□□ -1.59
SSB1YDL229W SIN3P22579 1536 aa5.13□□□□□ -1.59
SSB1YDL229W PDR1P12383 1068 aa5.13□□□□□ -1.59
SSB1YDL229W CLB5P30283 435 aa5.13□□□□□ -1.59
SSB1YDL229W GEF1P37020 779 aa5.13□□□□□ -1.59
SSB1YDL229W IMH1Q06704 911 aaKnown RBP5.13□□□□□ -1.59
SSB1YDL229W BRE1Q07457 700 aaKnown RBP5.13□□□□□ -1.59
SSB1YDL229W RIX7Q07844 837 aaKnown RBP5.13□□□□□ -1.59
SSB1YDL229W SSA4P22202 642 aaKnown RBP5.12□□□□□ -1.59
SSB1YDL229W TPS3P38426 1054 aaKnown RBP5.12□□□□□ -1.59
SSB1YDL229W SNF7P39929 240 aaKnown RBP5.12□□□□□ -1.59
SSB1YDL229W RPT2P40327 437 aaKnown RBP5.12□□□□□ -1.59
SSB1YDL229W TAF1P46677 1066 aa5.12□□□□□ -1.59
SSB1YDL229W FAR11P53917 953 aa5.12□□□□□ -1.59
SSB1YDL229W ERV41Q04651 352 aa5.12□□□□□ -1.59
SSB1YDL229W NOP58Q12499 511 aaKnown RBP5.12□□□□□ -1.59
SSB1YDL229W MED8P38304 223 aa5.11□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 49.7 ms