Protein–RNA interactions for Protein: Q03654

CEF1, Pre-mRNA-splicing factor CEF1, yeastyeast

Predicted RBP Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CEF1Q03654 YML009W-BYML009W-B 477 nt21.94■■□□□ 1.1
CEF1Q03654 NSR1YGR159C 1245 nt21.91■■□□□ 1.1
CEF1Q03654 NOP1YDL014W 984 nt21.4■■□□□ 1.02
CEF1Q03654 YKL036CYKL036C 393 nt19.78■□□□□ 0.76
CEF1Q03654 MDJ1YFL016C 1536 nt19.35■□□□□ 0.69
CEF1Q03654 Q0297Q0297 156 nt18.83■□□□□ 0.6
CEF1Q03654 SRX1YKL086W 384 nt18.75■□□□□ 0.59
CEF1Q03654 YJL027CYJL027C 417 nt18.42■□□□□ 0.54
CEF1Q03654 SCS3YGL126W 1143 nt18.03■□□□□ 0.48
CEF1Q03654 YCR051WYCR051W 669 nt17.67■□□□□ 0.42
CEF1Q03654 DBP2YNL112W 1641 nt17.23■□□□□ 0.35
CEF1Q03654 YOL085CYOL085C 342 nt17.16■□□□□ 0.34
CEF1Q03654 TRN1tP(UGG)A 72 nt16.95■□□□□ 0.3
CEF1Q03654 SUF9tP(UGG)F 72 nt16.95■□□□□ 0.3
CEF1Q03654 SUF8tP(UGG)H 72 nt16.95■□□□□ 0.3
CEF1Q03654 tP(UGG)LtP(UGG)L 72 nt16.95■□□□□ 0.3
CEF1Q03654 SUF7tP(UGG)M 72 nt16.95■□□□□ 0.3
CEF1Q03654 tP(UGG)N1tP(UGG)N1 72 nt16.95■□□□□ 0.3
CEF1Q03654 tP(UGG)N2tP(UGG)N2 72 nt16.95■□□□□ 0.3
CEF1Q03654 tP(UGG)O1tP(UGG)O1 72 nt16.95■□□□□ 0.3
CEF1Q03654 SUF11tP(UGG)O2 72 nt16.95■□□□□ 0.3
CEF1Q03654 RPP1BYDL130W 321 nt16.85■□□□□ 0.29
CEF1Q03654 PKP1YIL042C 1185 nt16.8■□□□□ 0.28
CEF1Q03654 CCC1YLR220W 969 nt16.62■□□□□ 0.25
CEF1Q03654 YBR190WYBR190W 312 nt16.55■□□□□ 0.24
CEF1Q03654 ATS1YAL020C 1002 nt16.14■□□□□ 0.17
CEF1Q03654 SCJ1YMR214W 1134 nt16.09■□□□□ 0.17
CEF1Q03654 RVS167YDR388W 1449 nt16.09■□□□□ 0.17
CEF1Q03654 PET122YER153C 765 nt16.07■□□□□ 0.16
CEF1Q03654 RTC3YHR087W 336 nt16.05■□□□□ 0.16
CEF1Q03654 tP(UGG)O3tP(UGG)O3 72 nt16.01■□□□□ 0.15
CEF1Q03654 SCR1SCR1 522 nt15.86■□□□□ 0.13
CEF1Q03654 SHR5YOL110W 714 nt15.61■□□□□ 0.09
CEF1Q03654 RRN5YLR141W 1092 nt15.6■□□□□ 0.09
CEF1Q03654 YDJ1YNL064C 1230 nt15.54■□□□□ 0.08
CEF1Q03654 YER088W-BYER088W-B 147 nt15.32■□□□□ 0.04
CEF1Q03654 RSB1YOR049C 1065 nt15.23■□□□□ 0.03
CEF1Q03654 URN1YPR152C 1398 nt15.11■□□□□ 0.01
CEF1Q03654 GAR1YHR089C 618 nt15.07■□□□□ 0
CEF1Q03654 PUT4YOR348C 1884 nt15.04■□□□□ -0
CEF1Q03654 DEP1YAL013W 1218 nt15.04■□□□□ -0
CEF1Q03654 PST2YDR032C 597 nt14.99□□□□□ -0.01
CEF1Q03654 OPI9YLR338W 858 nt14.94□□□□□ -0.02
CEF1Q03654 Q0182Q0182 405 nt14.93□□□□□ -0.02
CEF1Q03654 YNL208WYNL208W 600 nt14.9□□□□□ -0.02
CEF1Q03654 RPN10YHR200W 807 nt14.88□□□□□ -0.03
CEF1Q03654 SAH1YER043C 1350 nt14.78□□□□□ -0.04
CEF1Q03654 ARE1YCR048W 1833 nt14.77□□□□□ -0.05
CEF1Q03654 SSA3YBL075C 1950 nt14.7□□□□□ -0.06
CEF1Q03654 TIR1YER011W 765 nt14.61□□□□□ -0.07
CEF1Q03654 YHR049C-AYHR049C-A 297 nt14.5□□□□□ -0.09
CEF1Q03654 PUN1YLR414C 792 nt14.48□□□□□ -0.09
CEF1Q03654 POA1YBR022W 534 nt14.48□□□□□ -0.09
CEF1Q03654 SSA1YAL005C 1929 nt14.46□□□□□ -0.09
CEF1Q03654 YJR018WYJR018W 363 nt14.42□□□□□ -0.1
CEF1Q03654 SHU1YHL006C 453 nt14.33□□□□□ -0.12
CEF1Q03654 YKL097CYKL097C 411 nt14.33□□□□□ -0.12
CEF1Q03654 YJR120WYJR120W 351 nt14.32□□□□□ -0.12
CEF1Q03654 PTC2YER089C 1395 nt14.26□□□□□ -0.13
CEF1Q03654 SRB2YHR041C 633 nt14.26□□□□□ -0.13
CEF1Q03654 BSC6YOL137W 1494 nt14.19□□□□□ -0.14
CEF1Q03654 NAB2YGL122C 1578 nt14.1□□□□□ -0.15
CEF1Q03654 RPP2BYDR382W 333 nt14.1□□□□□ -0.15
CEF1Q03654 BUD23YCR047C 828 nt14.09□□□□□ -0.15
CEF1Q03654 MOT3YMR070W 1473 nt14.05□□□□□ -0.16
CEF1Q03654 YAL037C-BYAL037C-B 975 nt14.02□□□□□ -0.17
CEF1Q03654 WWM1YFL010C 636 nt13.96□□□□□ -0.17
CEF1Q03654 FIS1YIL065C 468 nt13.96□□□□□ -0.17
CEF1Q03654 INM2YDR287W 879 nt13.93□□□□□ -0.18
CEF1Q03654 DAL1YIR027C 1383 nt13.93□□□□□ -0.18
CEF1Q03654 YGR021WYGR021W 873 nt13.92□□□□□ -0.18
CEF1Q03654 HOM6YJR139C 1080 nt13.91□□□□□ -0.18
CEF1Q03654 BDH2YAL061W 1254 nt13.89□□□□□ -0.19
CEF1Q03654 YOR139CYOR139C 393 nt13.82□□□□□ -0.2
CEF1Q03654 PHO4YFR034C 939 nt13.79□□□□□ -0.2
CEF1Q03654 YFL021C-AYFL021C-A 855 nt13.78□□□□□ -0.2
CEF1Q03654 MNP1YGL068W 585 nt13.77□□□□□ -0.21
CEF1Q03654 FPR4YLR449W 1179 nt13.76□□□□□ -0.21
CEF1Q03654 YBL100CYBL100C 315 nt13.76□□□□□ -0.21
CEF1Q03654 LSM3YLR438C-A 270 nt13.75□□□□□ -0.21
CEF1Q03654 SPT5YML010W 3192 nt13.69□□□□□ -0.22
CEF1Q03654 RKM5YLR137W 1104 nt13.68□□□□□ -0.22
CEF1Q03654 FUN26YAL022C 1554 nt13.62□□□□□ -0.23
CEF1Q03654 YOL037CYOL037C 354 nt13.61□□□□□ -0.23
CEF1Q03654 NPL3YDR432W 1245 nt13.59□□□□□ -0.23
CEF1Q03654 TRM9YML014W 840 nt13.57□□□□□ -0.24
CEF1Q03654 YPS1YLR120C 1710 nt13.55□□□□□ -0.24
CEF1Q03654 CCT6YDR188W 1641 nt13.52□□□□□ -0.25
CEF1Q03654 YDR095CYDR095C 411 nt13.49□□□□□ -0.25
CEF1Q03654 MEP2YNL142W 1500 nt13.35□□□□□ -0.27
CEF1Q03654 ALF1YNL148C 765 nt13.34□□□□□ -0.27
CEF1Q03654 SUF2tP(AGG)C 72 nt13.33□□□□□ -0.28
CEF1Q03654 SUF10tP(AGG)N 72 nt13.33□□□□□ -0.28
CEF1Q03654 YLR281CYLR281C 468 nt13.31□□□□□ -0.28
CEF1Q03654 YHR165W-AYHR165W-A 312 nt13.3□□□□□ -0.28
CEF1Q03654 FPS1YLL043W 2010 nt13.3□□□□□ -0.28
CEF1Q03654 SIS1YNL007C 1059 nt13.29□□□□□ -0.28
CEF1Q03654 tM(CAU)CtM(CAU)C 72 nt13.28□□□□□ -0.28
CEF1Q03654 IMT4tM(CAU)E 72 nt13.28□□□□□ -0.28
CEF1Q03654 IMT3tM(CAU)J3 72 nt13.28□□□□□ -0.28
Retrieved 100 of 7,029 protein–RNA pairs in 13.5 ms