RNA–Protein interactions for RNA: YBR074W

PFF1, Transcript of Multi-spanning vacuolar membrane protease, yeast

Gene PFF1, Length 2,931 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PFF1	YBR074W	GRE2	Q12068	342 aa	Known RBP	4.18	□□□□□ -1.74
PFF1	YBR074W	XRN1	P22147	1528 aa	Known RBP	4.17	□□□□□ -1.74
PFF1	YBR074W	SIN3	P22579	1536 aa		4.17	□□□□□ -1.74
PFF1	YBR074W	SET1	P38827	1080 aa	Known RBP	4.16	□□□□□ -1.74
PFF1	YBR074W	IFH1	P39520	1085 aa		4.15	□□□□□ -1.74
PFF1	YBR074W	HTA1	P04911	132 aa	Known RBP	4.15	□□□□□ -1.75
PFF1	YBR074W	HTA2	P04912	132 aa		4.15	□□□□□ -1.75
PFF1	YBR074W	DCW1	P36091	449 aa		4.15	□□□□□ -1.75
PFF1	YBR074W	PTC3	P34221	468 aa	Known RBP	4.15	□□□□□ -1.75
PFF1	YBR074W	TFG1	P41895	735 aa	Predicted RBP	4.14	□□□□□ -1.75
PFF1	YBR074W	GUT1	P32190	709 aa		4.14	□□□□□ -1.75
PFF1	YBR074W	NUP170	P38181	1502 aa		4.13	□□□□□ -1.75
PFF1	YBR074W	MMS22	Q06164	1454 aa		4.13	□□□□□ -1.75
PFF1	YBR074W	EDS1	P38073	919 aa		4.12	□□□□□ -1.75
PFF1	YBR074W	TRP5	P00931	707 aa	Known RBP	4.11	□□□□□ -1.75
PFF1	YBR074W	UFD4	P33202	1483 aa		4.11	□□□□□ -1.75
PFF1	YBR074W	THO2	P53552	1597 aa	Known RBP	4.11	□□□□□ -1.75
PFF1	YBR074W	YJL171C	P46992	396 aa		4.11	□□□□□ -1.75
PFF1	YBR074W	JIP4	Q03361	876 aa		4.11	□□□□□ -1.75
PFF1	YBR074W	YNL035C	P53962	389 aa	Known RBP	4.1	□□□□□ -1.75
PFF1	YBR074W	LDB19	Q12502	818 aa		4.1	□□□□□ -1.75
PFF1	YBR074W	SPT6	P23615	1451 aa	Known RBP	4.09	□□□□□ -1.75
PFF1	YBR074W	RTG1	P32607	177 aa		4.08	□□□□□ -1.76
PFF1	YBR074W	IOC2	Q12072	812 aa		4.08	□□□□□ -1.76
PFF1	YBR074W	NCR1	Q12200	1170 aa		4.08	□□□□□ -1.76
PFF1	YBR074W	SEC61	P32915	480 aa		4.07	□□□□□ -1.76
PFF1	YBR074W	PTC4	P38089	393 aa		4.07	□□□□□ -1.76
PFF1	YBR074W	HSL1	P34244	1518 aa		4.07	□□□□□ -1.76
PFF1	YBR074W	YEL023C	P39992	682 aa		4.07	□□□□□ -1.76
PFF1	YBR074W	SSK2	P53599	1579 aa		4.07	□□□□□ -1.76
PFF1	YBR074W	VPS70	P47161	811 aa		4.06	□□□□□ -1.76
PFF1	YBR074W	CKB1	P43639	278 aa		4.05	□□□□□ -1.76
PFF1	YBR074W	FKH1	P40466	484 aa		4.05	□□□□□ -1.76
PFF1	YBR074W	DNA2	P38859	1522 aa		4.04	□□□□□ -1.76
PFF1	YBR074W	KIC1	P38692	1080 aa		4.03	□□□□□ -1.76
PFF1	YBR074W	YGR273C	P53329	174 aa		4.03	□□□□□ -1.76
PFF1	YBR074W	BMT6	Q12291	365 aa		4.03	□□□□□ -1.76
PFF1	YBR074W	REF2	P42073	533 aa	Predicted RBP	4.02	□□□□□ -1.77
PFF1	YBR074W	MYO2	P19524	1574 aa	Known RBP	4.02	□□□□□ -1.77
PFF1	YBR074W	RPP1B	P10622	106 aa	Known RBP	4.02	□□□□□ -1.77
PFF1	YBR074W	PEX29	Q03370	554 aa		4.02	□□□□□ -1.77
PFF1	YBR074W	YPR148C	Q06523	435 aa		4.02	□□□□□ -1.77
PFF1	YBR074W	YDL129W	Q07555	291 aa		4.02	□□□□□ -1.77
PFF1	YBR074W	AIR2	Q12476	344 aa	Known RBP	4.01	□□□□□ -1.77
PFF1	YBR074W	SPP41	P38904	1435 aa		4.01	□□□□□ -1.77
PFF1	YBR074W	STU1	P38198	1513 aa		4.01	□□□□□ -1.77
PFF1	YBR074W	MPH3	P0CE00	602 aa		4.01	□□□□□ -1.77
PFF1	YBR074W	HIR3	P47171	1648 aa		4.01	□□□□□ -1.77
PFF1	YBR074W	AI4	P03878	556 aa		4.01	□□□□□ -1.77
PFF1	YBR074W	SPB4	P25808	606 aa	Predicted RBP	4	□□□□□ -1.77
PFF1	YBR074W	DAN4	P47179	1161 aa		4	□□□□□ -1.77
PFF1	YBR074W	POL1	P13382	1468 aa		3.99	□□□□□ -1.77
PFF1	YBR074W	RAD54	P32863	898 aa		3.99	□□□□□ -1.77
PFF1	YBR074W	SAP30	P38429	201 aa		3.99	□□□□□ -1.77
PFF1	YBR074W	VHR2	P40041	505 aa		3.99	□□□□□ -1.77
PFF1	YBR074W	PML39	Q03760	334 aa		3.99	□□□□□ -1.77
PFF1	YBR074W	MAK21	Q12176	1025 aa	Known RBP	3.99	□□□□□ -1.77
PFF1	YBR074W	ESP1	Q03018	1630 aa		3.99	□□□□□ -1.77
PFF1	YBR074W	REV3	P14284	1504 aa		3.99	□□□□□ -1.77
PFF1	YBR074W	ECM5	Q03214	1411 aa		3.99	□□□□□ -1.77
PFF1	YBR074W	SOL3	P38858	249 aa		3.98	□□□□□ -1.77
PFF1	YBR074W	SAS10	Q12136	610 aa	Predicted RBP	3.98	□□□□□ -1.77
PFF1	YBR074W	MLP2	P40457	1679 aa		3.97	□□□□□ -1.77
PFF1	YBR074W	MYO4	P32492	1471 aa		3.97	□□□□□ -1.77
PFF1	YBR074W	KEX1	P09620	729 aa		3.97	□□□□□ -1.77
PFF1	YBR074W	NOP2	P40991	618 aa	Known RBP	3.96	□□□□□ -1.78
PFF1	YBR074W	ELP4	Q02884	456 aa	Known RBP	3.96	□□□□□ -1.78
PFF1	YBR074W	PEP1	P32319	1579 aa		3.96	□□□□□ -1.78
PFF1	YBR074W	PBS2	P08018	668 aa		3.95	□□□□□ -1.78
PFF1	YBR074W	UBP14	P38237	781 aa	Known RBP	3.94	□□□□□ -1.78
PFF1	YBR074W	YLR326W	Q06170	240 aa	Known RBP	3.94	□□□□□ -1.78
PFF1	YBR074W	NST1	P53935	1240 aa		3.94	□□□□□ -1.78
PFF1	YBR074W	PEX21	P50091	288 aa		3.93	□□□□□ -1.78
PFF1	YBR074W	MID1	P41821	548 aa		3.93	□□□□□ -1.78
PFF1	YBR074W	PDR10	P51533	1564 aa		3.92	□□□□□ -1.78
PFF1	YBR074W	TRM732	Q03496	1420 aa		3.92	□□□□□ -1.78
PFF1	YBR074W	COX6	P00427	148 aa		3.92	□□□□□ -1.78
PFF1	YBR074W	ILV3	P39522	585 aa	Known RBP	3.92	□□□□□ -1.78
PFF1	YBR074W	PDR5	P33302	1511 aa	Known RBP	3.92	□□□□□ -1.78
PFF1	YBR074W	YTA7	P40340	1379 aa		3.92	□□□□□ -1.78
PFF1	YBR074W	SLI15	P38283	698 aa		3.92	□□□□□ -1.78
PFF1	YBR074W	MAM3	Q12296	706 aa		3.92	□□□□□ -1.78
PFF1	YBR074W	YPK9	Q12697	1472 aa		3.91	□□□□□ -1.78
PFF1	YBR074W	CHL1	P22516	861 aa	Predicted RBP	3.91	□□□□□ -1.78
PFF1	YBR074W	DPL1	Q05567	589 aa		3.91	□□□□□ -1.78
PFF1	YBR074W	IRC20	Q06554	1556 aa		3.91	□□□□□ -1.78
PFF1	YBR074W	PCS60	P38137	543 aa	Known RBP RIP-Chip data	3.91	□□□□□ -1.78	not detected
PFF1	YBR074W	STH1	P32597	1359 aa		3.9	□□□□□ -1.78
PFF1	YBR074W	PRE3	P38624	215 aa		3.9	□□□□□ -1.78
PFF1	YBR074W	IKI3	Q06706	1349 aa	Known RBP	3.9	□□□□□ -1.78
PFF1	YBR074W	ARH1	P48360	493 aa		3.9	□□□□□ -1.79
PFF1	YBR074W	HAP5	Q02516	242 aa		3.9	□□□□□ -1.79
PFF1	YBR074W	MPC54	Q08550	464 aa		3.9	□□□□□ -1.79
PFF1	YBR074W	ISU2	Q12056	156 aa		3.9	□□□□□ -1.79
PFF1	YBR074W	SPT23	P35210	1082 aa		3.89	□□□□□ -1.79
PFF1	YBR074W	YOR1	P53049	1477 aa		3.89	□□□□□ -1.79
PFF1	YBR074W	NMA111	P53920	997 aa		3.89	□□□□□ -1.79
PFF1	YBR074W	CSC1	Q06538	782 aa		3.89	□□□□□ -1.79
PFF1	YBR074W	YDR090C	Q03193	310 aa		3.88	□□□□□ -1.79
PFF1	YBR074W	DSF2	P38213	736 aa		3.88	□□□□□ -1.79

Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms