RNA–Protein interactions for RNA: YBR074W

PFF1, Transcript of Multi-spanning vacuolar membrane protease, yeastyeast

Gene PFF1, Length 2,931 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PFF1YBR074W MTC1P47018 478 aaKnown RBP6.83□□□□□ -1.32
PFF1YBR074W DRS1P32892 752 aaKnown RBP6.69□□□□□ -1.34
PFF1YBR074W FAP1P53971 965 aa5.94□□□□□ -1.46
PFF1YBR074W DIP2Q12220 943 aaPredicted RBP5.75□□□□□ -1.49
PFF1YBR074W BFR2Q06631 534 aaKnown RBP5.71□□□□□ -1.49
PFF1YBR074W ISW2Q08773 1120 aa5.68□□□□□ -1.5
PFF1YBR074W AAD16Q02895 342 aa5.59□□□□□ -1.51
PFF1YBR074W PRI1P10363 409 aa5.58□□□□□ -1.52
PFF1YBR074W RPG1P38249 964 aaKnown RBP5.56□□□□□ -1.52
PFF1YBR074W AVT3P36062 692 aa5.54□□□□□ -1.52
PFF1YBR074W PRY3P47033 881 aa5.54□□□□□ -1.52
PFF1YBR074W RSE1Q04693 1361 aaKnown RBP5.53□□□□□ -1.52
PFF1YBR074W TSR3Q12094 313 aaKnown RBP5.33□□□□□ -1.56
PFF1YBR074W RPL17AP05740 184 aaKnown RBP5.32□□□□□ -1.56
PFF1YBR074W RPL17BP46990 184 aaKnown RBP5.32□□□□□ -1.56
PFF1YBR074W REB1P21538 810 aa5.31□□□□□ -1.56
PFF1YBR074W HAA1Q12753 694 aaKnown RBP5.24□□□□□ -1.57
PFF1YBR074W MRPL32P25348 183 aa5.2□□□□□ -1.58
PFF1YBR074W TFA1P36100 482 aa5.17□□□□□ -1.58
PFF1YBR074W YCK3P39962 524 aa5.03□□□□□ -1.6
PFF1YBR074W SPT21P35209 758 aa5□□□□□ -1.61
PFF1YBR074W RIM101P33400 625 aa4.93□□□□□ -1.62
PFF1YBR074W YGL015CP33199 130 aa4.9□□□□□ -1.63
PFF1YBR074W YKR023WP36119 530 aaKnown RBP4.89□□□□□ -1.63
PFF1YBR074W CDC27P38042 758 aa4.85□□□□□ -1.63
PFF1YBR074W HOP09932 586 aa4.84□□□□□ -1.63
PFF1YBR074W YIL055CP40523 627 aaKnown RBP4.83□□□□□ -1.64
PFF1YBR074W TFC8Q12308 588 aa4.83□□□□□ -1.64
PFF1YBR074W MON2P48563 1636 aaPredicted RBP4.8□□□□□ -1.64
PFF1YBR074W PTP3P40048 928 aa4.77□□□□□ -1.65
PFF1YBR074W DCD1P06773 312 aa4.77□□□□□ -1.65
PFF1YBR074W UBP10P53874 792 aaPredicted RBP4.76□□□□□ -1.65
PFF1YBR074W OXP1P28273 1286 aa4.74□□□□□ -1.65
PFF1YBR074W YAH1Q12184 172 aaKnown RBP4.73□□□□□ -1.65
PFF1YBR074W MAP2P38174 421 aaKnown RBP4.7□□□□□ -1.66
PFF1YBR074W SCY1P53009 804 aa4.69□□□□□ -1.66
PFF1YBR074W ARP8Q12386 881 aaKnown RBP RIP-Chip data4.69□□□□□ -1.66not detected
PFF1YBR074W RSM7P47150 247 aa4.69□□□□□ -1.66
PFF1YBR074W SPA2P23201 1466 aaKnown RBP4.68□□□□□ -1.66
PFF1YBR074W BCH2P36122 765 aa4.67□□□□□ -1.66
PFF1YBR074W SSP1P38871 571 aa4.67□□□□□ -1.66
PFF1YBR074W BBC1P47068 1157 aa4.66□□□□□ -1.66
PFF1YBR074W SLX5P32828 619 aaKnown RBP4.65□□□□□ -1.66
PFF1YBR074W TIF4632P39936 914 aaKnown RBP4.62□□□□□ -1.67
PFF1YBR074W AI2P03876 854 aa4.6□□□□□ -1.67
PFF1YBR074W EPS1P40557 701 aa4.6□□□□□ -1.67
PFF1YBR074W YLR271WQ06152 274 aa4.58□□□□□ -1.68
PFF1YBR074W BDF1P35817 686 aa4.56□□□□□ -1.68
PFF1YBR074W TGL3P40308 642 aa4.54□□□□□ -1.68
PFF1YBR074W MGA2P40578 1113 aa4.52□□□□□ -1.69
PFF1YBR074W INO80P53115 1489 aa4.48□□□□□ -1.69
PFF1YBR074W PSD2P53037 1138 aaKnown RBP4.48□□□□□ -1.69
PFF1YBR074W SKI3P17883 1432 aaKnown RBP4.47□□□□□ -1.69
PFF1YBR074W MRM1P25270 412 aa4.45□□□□□ -1.7
PFF1YBR074W CST9Q06032 482 aa4.42□□□□□ -1.7
PFF1YBR074W YOR238WQ08634 303 aa4.42□□□□□ -1.7
PFF1YBR074W SSN2P38931 1420 aa4.42□□□□□ -1.7
PFF1YBR074W YAP5P40574 245 aa4.41□□□□□ -1.7
PFF1YBR074W UBP9P39967 754 aa4.41□□□□□ -1.7
PFF1YBR074W RTG3P38165 486 aa4.4□□□□□ -1.7
PFF1YBR074W SGS1P35187 1447 aa4.4□□□□□ -1.71
PFF1YBR074W NSR1P27476 414 aaKnown RBP RIP-Chip data4.38□□□□□ -1.71not detected
PFF1YBR074W GTT3P39996 337 aa4.38□□□□□ -1.71
PFF1YBR074W RQC2Q12532 1038 aaKnown RBP4.36□□□□□ -1.71
PFF1YBR074W CHD1P32657 1468 aa4.36□□□□□ -1.71
PFF1YBR074W YMR1P47147 688 aaKnown RBP RIP-Chip data4.34□□□□□ -1.72not detected
PFF1YBR074W KOG1P38873 1557 aa4.33□□□□□ -1.72
PFF1YBR074W MST1P07236 462 aa4.31□□□□□ -1.72
PFF1YBR074W PIB1Q06651 286 aa4.31□□□□□ -1.72
PFF1YBR074W DBP1P24784 617 aaKnown RBP4.3□□□□□ -1.72
PFF1YBR074W BUD31P25337 157 aaPredicted RBP4.3□□□□□ -1.72
PFF1YBR074W VPS29P38759 282 aa4.3□□□□□ -1.72
PFF1YBR074W YFR006WP43590 535 aa4.28□□□□□ -1.72
PFF1YBR074W WSC3Q12215 556 aa4.28□□□□□ -1.72
PFF1YBR074W RCR1P38212 213 aa4.27□□□□□ -1.73
PFF1YBR074W RAM2P29703 316 aa4.25□□□□□ -1.73
PFF1YBR074W MAK11P20484 414 aaKnown RBP4.24□□□□□ -1.73
PFF1YBR074W MIF2P35201 549 aa4.24□□□□□ -1.73
PFF1YBR074W STS1P38637 319 aa4.23□□□□□ -1.73
PFF1YBR074W SPP1Q03012 353 aa4.23□□□□□ -1.73
PFF1YBR074W YBL029C-AQ3E756 94 aa4.23□□□□□ -1.73
PFF1YBR074W VMA1P17255 1071 aaKnown RBP4.22□□□□□ -1.73
PFF1YBR074W SIS1P25294 352 aaKnown RBP4.22□□□□□ -1.73
PFF1YBR074W TCB3Q03640 1545 aaKnown RBP4.22□□□□□ -1.73
PFF1YBR074W SWR1Q05471 1514 aa4.22□□□□□ -1.73
PFF1YBR074W TY1B-DR4Q07793 1604 aa4.22□□□□□ -1.73
PFF1YBR074W EAP1P36041 632 aaKnown RBP4.22□□□□□ -1.73
PFF1YBR074W VNX1P42839 908 aa4.21□□□□□ -1.74
PFF1YBR074W MSB4Q12317 492 aa4.21□□□□□ -1.74
PFF1YBR074W GYP5Q12344 894 aa4.2□□□□□ -1.74
PFF1YBR074W TIF11P38912 153 aaKnown RBP4.2□□□□□ -1.74
PFF1YBR074W ABP1P15891 592 aaKnown RBP4.19□□□□□ -1.74
PFF1YBR074W SET4P42948 560 aa4.19□□□□□ -1.74
PFF1YBR074W COQ8P27697 501 aa4.19□□□□□ -1.74
PFF1YBR074W DMA1P38823 416 aa4.19□□□□□ -1.74
PFF1YBR074W YOL036WQ08206 761 aa4.18□□□□□ -1.74
PFF1YBR074W SAM3Q08986 587 aa4.18□□□□□ -1.74
PFF1YBR074W ULI1P43604 169 aa4.18□□□□□ -1.74
PFF1YBR074W ATH1P48016 1211 aa4.18□□□□□ -1.74
PFF1YBR074W NOP53Q12080 455 aaKnown RBP4.18□□□□□ -1.74
Retrieved 100 of 5,963 RNA–protein pairs in 23.5 ms