RNA–Protein interactions for RNA: ENST00000641991.1

CASC19-272, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 1,360 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-272ENST00000641991 ARHGAP35Q9NRY4 1499 aa18.3■□□□□ 0.52
CASC19-272ENST00000641991 VPS8Q8N3P4 1428 aa18.27■□□□□ 0.52
CASC19-272ENST00000641991 RANGAP1P46060 587 aaPredicted RBP18.27■□□□□ 0.51
CASC19-272ENST00000641991 EFCAB5A4FU69 1503 aa18.23■□□□□ 0.51
CASC19-272ENST00000641991 IQGAP2Q13576 1575 aa18.2■□□□□ 0.5
CASC19-272ENST00000641991 NUP160Q12769 1436 aa18.2■□□□□ 0.5
CASC19-272ENST00000641991 KIAA0586Q9BVV6 1533 aa18.2■□□□□ 0.5
CASC19-272ENST00000641991 CHMP7Q8WUX9 453 aaPredicted RBP18.19■□□□□ 0.5
CASC19-272ENST00000641991 SAMD9Q5K651 1589 aa18.18■□□□□ 0.5
CASC19-272ENST00000641991 CEP170Q5SW79 1584 aa18.18■□□□□ 0.5
CASC19-272ENST00000641991 UGGT2Q9NYU1 1516 aa18.15■□□□□ 0.5
CASC19-272ENST00000641991 FHOD3Q2V2M9 1422 aa18.13■□□□□ 0.49
CASC19-272ENST00000641991 FBLN2P98095 1184 aa18.12■□□□□ 0.49
CASC19-272ENST00000641991 CHD1O14646 1710 aa18.08■□□□□ 0.48
CASC19-272ENST00000641991 P3H3Q8IVL6 736 aa18.06■□□□□ 0.48
CASC19-272ENST00000641991 DISP1Q96F81 1524 aa18.05■□□□□ 0.48
CASC19-272ENST00000641991 FMN1Q68DA7 1419 aa18.05■□□□□ 0.48
CASC19-272ENST00000641991 PCF11O94913 1555 aaKnown RBP18.04■□□□□ 0.48
CASC19-272ENST00000641991 KIAA0556O60303 1618 aa18.03■□□□□ 0.48
CASC19-272ENST00000641991 FYCO1Q9BQS8 1478 aa18.02■□□□□ 0.48
CASC19-272ENST00000641991 CASKIN1Q8WXD9 1431 aa18.01■□□□□ 0.47
CASC19-272ENST00000641991 PPARGC1BQ86YN6 1023 aaKnown RBP18.01■□□□□ 0.47
CASC19-272ENST00000641991 MAP3K1Q13233 1512 aa17.99■□□□□ 0.47
CASC19-272ENST00000641991 TRIM26Q12899 539 aaPredicted RBP17.97■□□□□ 0.47
CASC19-272ENST00000641991 JPH4Q96JJ6 628 aa17.97■□□□□ 0.47
CASC19-272ENST00000641991 APLP2Q06481 763 aa17.96■□□□□ 0.47
CASC19-272ENST00000641991 CLASP1Q7Z460 1538 aa17.96■□□□□ 0.46
CASC19-272ENST00000641991 SHROOM2Q13796 1616 aa17.95■□□□□ 0.46
CASC19-272ENST00000641991 TIAM1Q13009 1591 aa17.94■□□□□ 0.46
CASC19-272ENST00000641991 CARMIL2Q6F5E8 1435 aa17.94■□□□□ 0.46
CASC19-272ENST00000641991 CFAP43Q8NDM7 1665 aa17.92■□□□□ 0.46
CASC19-272ENST00000641991 PCGF6Q9BYE7 350 aa17.9■□□□□ 0.46
CASC19-272ENST00000641991 PRG4Q92954 1404 aaPredicted RBP17.9■□□□□ 0.46
CASC19-272ENST00000641991 TTBK1Q5TCY1 1321 aaPredicted RBP17.89■□□□□ 0.45
CASC19-272ENST00000641991 KANK4Q5T7N3 995 aaPredicted RBP17.89■□□□□ 0.45
CASC19-272ENST00000641991 HECW1Q76N89 1606 aa17.87■□□□□ 0.45
CASC19-272ENST00000641991 LRRC9Q6ZRR7 1453 aa17.86■□□□□ 0.45
CASC19-272ENST00000641991 CCDC18Q5T9S5 1454 aa17.83■□□□□ 0.45
CASC19-272ENST00000641991 ATP1B4Q9UN42 357 aaPredicted RBP17.82■□□□□ 0.44
CASC19-272ENST00000641991 LRRIQ1Q96JM4 1722 aa17.82■□□□□ 0.44
CASC19-272ENST00000641991 RAPGEF6Q8TEU7 1601 aa17.82■□□□□ 0.44
CASC19-272ENST00000641991 NUP153P49790 1475 aaKnown RBP17.81■□□□□ 0.44
CASC19-272ENST00000641991 EPRSP07814 1512 aaKnown RBP17.81■□□□□ 0.44
CASC19-272ENST00000641991 ERCC6L2Q5T890 1561 aa17.81■□□□□ 0.44
CASC19-272ENST00000641991 PLB1Q6P1J6 1458 aa17.8■□□□□ 0.44
CASC19-272ENST00000641991 ABCA8O94911 1581 aa17.79■□□□□ 0.44
CASC19-272ENST00000641991 PTPRGP23470 1445 aa17.77■□□□□ 0.44
CASC19-272ENST00000641991 CDK13Q14004 1512 aaKnown RBP17.77■□□□□ 0.44
CASC19-272ENST00000641991 MAGI3Q5TCQ9 1506 aa17.75■□□□□ 0.43
CASC19-272ENST00000641991 EHBP1L1Q8N3D4 1523 aa17.75■□□□□ 0.43
CASC19-272ENST00000641991 OSCARQ8IYS5 282 aa17.74■□□□□ 0.43
CASC19-272ENST00000641991 MTUS2Q5JR59 1369 aa17.72■□□□□ 0.43
CASC19-272ENST00000641991 RRBP1Q9P2E9 1410 aaKnown RBP17.71■□□□□ 0.43
CASC19-272ENST00000641991 PHLDB1Q86UU1 1377 aa17.7■□□□□ 0.42
CASC19-272ENST00000641991 UACAQ9BZF9 1416 aa17.68■□□□□ 0.42
CASC19-272ENST00000641991 ARHGEF11O15085 1522 aa17.67■□□□□ 0.42
CASC19-272ENST00000641991 ARID3CA6NKF2 412 aa17.66■□□□□ 0.42
CASC19-272ENST00000641991 NCOA2Q15596 1464 aa17.66■□□□□ 0.42
CASC19-272ENST00000641991 ABCC2Q92887 1545 aa17.65■□□□□ 0.42
CASC19-272ENST00000641991 ATP10BO94823 1461 aa17.65■□□□□ 0.42
CASC19-272ENST00000641991 CCNB3Q8WWL7 1395 aa17.64■□□□□ 0.41
CASC19-272ENST00000641991 SUPT6HQ7KZ85 1726 aaKnown RBP17.63■□□□□ 0.41
CASC19-272ENST00000641991 UHRF1BP1LA0JNW5 1464 aa17.63■□□□□ 0.41
CASC19-272ENST00000641991 TROQ12816 1431 aaPredicted RBP17.62■□□□□ 0.41
CASC19-272ENST00000641991 CDK11AQ9UQ88 783 aaPredicted RBP17.6■□□□□ 0.41
CASC19-272ENST00000641991 MYOM3Q5VTT5 1437 aa17.59■□□□□ 0.41
CASC19-272ENST00000641991 FGD6Q6ZV73 1430 aa17.58■□□□□ 0.4
CASC19-272ENST00000641991 ADCY10Q96PN6 1610 aa17.56■□□□□ 0.4
CASC19-272ENST00000641991 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.56■□□□□ 0.4
CASC19-272ENST00000641991 HNRNPUL2Q1KMD3 747 aaKnown RBP17.56■□□□□ 0.4
CASC19-272ENST00000641991 KDM5BQ9UGL1 1544 aa17.55■□□□□ 0.4
CASC19-272ENST00000641991 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.55■□□□□ 0.4
CASC19-272ENST00000641991 KIF14Q15058 1648 aa17.52■□□□□ 0.4
CASC19-272ENST00000641991 PLEKHD1A6NEE1 506 aa17.51■□□□□ 0.39
CASC19-272ENST00000641991 TCOF1Q13428 1488 aaKnown RBP17.5■□□□□ 0.39
CASC19-272ENST00000641991 MIA2Q96PC5 1412 aa17.5■□□□□ 0.39
CASC19-272ENST00000641991 ZCCHC11Q5TAX3 1644 aaKnown RBP17.49■□□□□ 0.39
CASC19-272ENST00000641991 ABCC10Q5T3U5 1492 aa17.49■□□□□ 0.39
CASC19-272ENST00000641991 PTPN23Q9H3S7 1636 aa17.47■□□□□ 0.39
CASC19-272ENST00000641991 FAM50AQ14320 339 aaKnown RBP17.46■□□□□ 0.39
CASC19-272ENST00000641991 GPATCH8Q9UKJ3 1502 aaKnown RBP17.44■□□□□ 0.38
CASC19-272ENST00000641991 ITSN2Q9NZM3 1697 aa17.42■□□□□ 0.38
CASC19-272ENST00000641991 RIMBP3CA6NJZ7 1639 aa17.4■□□□□ 0.38
CASC19-272ENST00000641991 RIMBP3BA6NNM3 1639 aa17.4■□□□□ 0.38
CASC19-272ENST00000641991 RIMBP3Q9UFD9 1639 aa17.4■□□□□ 0.38
CASC19-272ENST00000641991 TTC37Q6PGP7 1564 aa17.38■□□□□ 0.37
CASC19-272ENST00000641991 WDR7Q9Y4E6 1490 aa17.38■□□□□ 0.37
CASC19-272ENST00000641991 ITGAEP38570 1179 aa17.38■□□□□ 0.37
CASC19-272ENST00000641991 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.37■□□□□ 0.37
CASC19-272ENST00000641991 PTPRKQ15262 1439 aa17.37■□□□□ 0.37
CASC19-272ENST00000641991 CDC42BPAQ5VT25 1732 aa17.36■□□□□ 0.37
CASC19-272ENST00000641991 HRCP23327 699 aa17.36■□□□□ 0.37
CASC19-272ENST00000641991 CAMSAP2Q08AD1 1489 aa17.35■□□□□ 0.37
CASC19-272ENST00000641991 CFDP1Q9UEE9 299 aaPredicted RBP17.35■□□□□ 0.37
CASC19-272ENST00000641991 PREX2Q70Z35 1606 aa17.34■□□□□ 0.37
CASC19-272ENST00000641991 ASXL2Q76L83 1435 aa17.34■□□□□ 0.37
CASC19-272ENST00000641991 ZNF644Q9H582 1327 aaPredicted RBP17.34■□□□□ 0.37
CASC19-272ENST00000641991 DNMT1P26358 1616 aaKnown RBP17.32■□□□□ 0.36
CASC19-272ENST00000641991 DAPK1P53355 1430 aa17.31■□□□□ 0.36
CASC19-272ENST00000641991 ABCC5O15440 1437 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms