RNA–Protein interactions for RNA: ENST00000641965.1

CASC19-270, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 2,329 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-270ENST00000641965 LOC105371045A0A1W2PR82 267 aa12.59□□□□□ -0.39
CASC19-270ENST00000641965 TARBP1Q13395 1621 aaKnown RBP12.58□□□□□ -0.4
CASC19-270ENST00000641965 FBLN2P98095 1184 aa12.58□□□□□ -0.4
CASC19-270ENST00000641965 ABCA10Q8WWZ4 1543 aa12.58□□□□□ -0.4
CASC19-270ENST00000641965 IFT140Q96RY7 1462 aa12.58□□□□□ -0.4
CASC19-270ENST00000641965 WDR97A6NE52 1622 aa12.57□□□□□ -0.4
CASC19-270ENST00000641965 RAD54L2Q9Y4B4 1467 aa12.55□□□□□ -0.4
CASC19-270ENST00000641965 EEA1Q15075 1411 aa12.54□□□□□ -0.4
CASC19-270ENST00000641965 HRCP23327 699 aa12.53□□□□□ -0.4
CASC19-270ENST00000641965 UBTFP17480 764 aaKnown RBP12.51□□□□□ -0.41
CASC19-270ENST00000641965 FKBP8Q14318 412 aa12.51□□□□□ -0.41
CASC19-270ENST00000641965 KIF27Q86VH2 1401 aa12.51□□□□□ -0.41
CASC19-270ENST00000641965 ABCA5Q8WWZ7 1642 aa12.49□□□□□ -0.41
CASC19-270ENST00000641965 RUSC2Q8N2Y8 1516 aa12.47□□□□□ -0.41
CASC19-270ENST00000641965 VSIG10Q8N0Z9 540 aa12.45□□□□□ -0.42
CASC19-270ENST00000641965 GAPVD1Q14C86 1478 aa12.45□□□□□ -0.42
CASC19-270ENST00000641965 ZNF608Q9ULD9 1512 aaPredicted RBP12.44□□□□□ -0.42
CASC19-270ENST00000641965 ERICH3Q5RHP9 1530 aa12.43□□□□□ -0.42
CASC19-270ENST00000641965 TDRD9Q8NDG6 1382 aaKnown RBP12.43□□□□□ -0.42
CASC19-270ENST00000641965 IGF1RP08069 1367 aa12.43□□□□□ -0.42
CASC19-270ENST00000641965 EIF4G3O43432 1585 aaKnown RBP12.42□□□□□ -0.42
CASC19-270ENST00000641965 PBRM1Q86U86 1689 aa12.42□□□□□ -0.42
CASC19-270ENST00000641965 AQRO60306 1485 aaKnown RBP eCLIP12.41□□□□□ -0.42
CASC19-270ENST00000641965 GRIN2BQ13224 1484 aa12.41□□□□□ -0.42
CASC19-270ENST00000641965 NPM3O75607 178 aaKnown RBP12.4□□□□□ -0.42
CASC19-270ENST00000641965 CUL7Q14999 1698 aa12.39□□□□□ -0.43
CASC19-270ENST00000641965 PRXQ9BXM0 1461 aa12.38□□□□□ -0.43
CASC19-270ENST00000641965 KIF21BO75037 1637 aa12.37□□□□□ -0.43
CASC19-270ENST00000641965 MAGI1Q96QZ7 1491 aaPredicted RBP12.35□□□□□ -0.43
CASC19-270ENST00000641965 FAM9AQ8IZU1 332 aaPredicted RBP12.35□□□□□ -0.43
CASC19-270ENST00000641965 PPP6R1Q9UPN7 881 aa12.35□□□□□ -0.43
CASC19-270ENST00000641965 CARMIL1Q5VZK9 1371 aa12.35□□□□□ -0.43
CASC19-270ENST00000641965 FBXO3Q9UK99 471 aa12.34□□□□□ -0.43
CASC19-270ENST00000641965 FHAD1B1AJZ9 1412 aa12.34□□□□□ -0.43
CASC19-270ENST00000641965 ADAMTS12P58397 1594 aa12.33□□□□□ -0.44
CASC19-270ENST00000641965 SNAPC4Q5SXM2 1469 aa12.32□□□□□ -0.44
CASC19-270ENST00000641965 RAPGEF2Q9Y4G8 1499 aa12.32□□□□□ -0.44
CASC19-270ENST00000641965 SYNJ2O15056 1496 aa12.29□□□□□ -0.44
CASC19-270ENST00000641965 GOLGA3Q08378 1498 aa12.29□□□□□ -0.44
CASC19-270ENST00000641965 GRIN2AQ12879 1464 aa12.24□□□□□ -0.45
CASC19-270ENST00000641965 TNIKQ9UKE5 1360 aa12.23□□□□□ -0.45
CASC19-270ENST00000641965 CHD1O14646 1710 aa12.21□□□□□ -0.45
CASC19-270ENST00000641965 CHMP7Q8WUX9 453 aaPredicted RBP12.21□□□□□ -0.45
CASC19-270ENST00000641965 NUP160Q12769 1436 aa12.2□□□□□ -0.46
CASC19-270ENST00000641965 CTTNBP2Q8WZ74 1663 aa12.19□□□□□ -0.46
CASC19-270ENST00000641965 CEP170Q5SW79 1584 aa12.16□□□□□ -0.46
CASC19-270ENST00000641965 KIAA0586Q9BVV6 1533 aa12.16□□□□□ -0.46
CASC19-270ENST00000641965 CHMP4AQ9BY43 222 aa12.12□□□□□ -0.47
CASC19-270ENST00000641965 IQGAP2Q13576 1575 aa12.12□□□□□ -0.47
CASC19-270ENST00000641965 CLASP1Q7Z460 1538 aa12.11□□□□□ -0.47
CASC19-270ENST00000641965 UGGT2Q9NYU1 1516 aa12.1□□□□□ -0.47
CASC19-270ENST00000641965 IGSF3O75054 1194 aa12.1□□□□□ -0.47
CASC19-270ENST00000641965 SHROOM2Q13796 1616 aa12.09□□□□□ -0.47
CASC19-270ENST00000641965 OSCARQ8IYS5 282 aa12.08□□□□□ -0.48
CASC19-270ENST00000641965 CEP162Q5TB80 1403 aa12.08□□□□□ -0.48
CASC19-270ENST00000641965 EFCAB5A4FU69 1503 aa12.08□□□□□ -0.48
CASC19-270ENST00000641965 SAMD9Q5K651 1589 aa12.07□□□□□ -0.48
CASC19-270ENST00000641965 CLIP1P30622 1438 aa12.06□□□□□ -0.48
CASC19-270ENST00000641965 PDIA4P13667 645 aaKnown RBP12.05□□□□□ -0.48
CASC19-270ENST00000641965 SAMD1Q6SPF0 538 aaPredicted RBP12.05□□□□□ -0.48
CASC19-270ENST00000641965 JPH4Q96JJ6 628 aa12.05□□□□□ -0.48
CASC19-270ENST00000641965 BCL11AQ9H165 835 aa12.04□□□□□ -0.48
CASC19-270ENST00000641965 ARHGAP35Q9NRY4 1499 aa12.04□□□□□ -0.48
CASC19-270ENST00000641965 DISP1Q96F81 1524 aa12.02□□□□□ -0.48
CASC19-270ENST00000641965 TRHP20396 242 aaPredicted RBP12.02□□□□□ -0.49
CASC19-270ENST00000641965 KIAA0556O60303 1618 aa12□□□□□ -0.49
CASC19-270ENST00000641965 DHX37Q8IY37 1157 aaKnown RBP12□□□□□ -0.49
CASC19-270ENST00000641965 CARMIL2Q6F5E8 1435 aa12□□□□□ -0.49
CASC19-270ENST00000641965 ARAP1Q96P48 1450 aa11.99□□□□□ -0.49
CASC19-270ENST00000641965 PRG4Q92954 1404 aaPredicted RBP11.99□□□□□ -0.49
CASC19-270ENST00000641965 TSHZ2Q9NRE2 1034 aa11.94□□□□□ -0.5
CASC19-270ENST00000641965 FHOD3Q2V2M9 1422 aa11.94□□□□□ -0.5
CASC19-270ENST00000641965 FMN1Q68DA7 1419 aa11.94□□□□□ -0.5
CASC19-270ENST00000641965 VPS8Q8N3P4 1428 aa11.94□□□□□ -0.5
CASC19-270ENST00000641965 ERCC6L2Q5T890 1561 aa11.93□□□□□ -0.5
CASC19-270ENST00000641965 P3H3Q8IVL6 736 aa11.92□□□□□ -0.5
CASC19-270ENST00000641965 CASKIN1Q8WXD9 1431 aa11.9□□□□□ -0.5
CASC19-270ENST00000641965 CFAP44Q96MT7 982 aa11.89□□□□□ -0.51
CASC19-270ENST00000641965 PTPRGP23470 1445 aa11.89□□□□□ -0.51
CASC19-270ENST00000641965 PAXIP1Q6ZW49 1069 aaPredicted RBP11.89□□□□□ -0.51
CASC19-270ENST00000641965 ABCA8O94911 1581 aa11.88□□□□□ -0.51
CASC19-270ENST00000641965 UBE2Q2Q8WVN8 375 aa11.88□□□□□ -0.51
CASC19-270ENST00000641965 FYCO1Q9BQS8 1478 aa11.87□□□□□ -0.51
CASC19-270ENST00000641965 ARHGEF11O15085 1522 aa11.87□□□□□ -0.51
CASC19-270ENST00000641965 RAPGEF6Q8TEU7 1601 aa11.86□□□□□ -0.51
CASC19-270ENST00000641965 PPP4R3CPQ6ZMV5 832 aa11.86□□□□□ -0.51
CASC19-270ENST00000641965 MAP3K1Q13233 1512 aa11.86□□□□□ -0.51
CASC19-270ENST00000641965 CNKSR2Q8WXI2 1034 aa11.86□□□□□ -0.51
CASC19-270ENST00000641965 UHRF1BP1LA0JNW5 1464 aa11.86□□□□□ -0.51
CASC19-270ENST00000641965 PCF11O94913 1555 aaKnown RBP11.85□□□□□ -0.51
CASC19-270ENST00000641965 NPM1P06748 294 aaKnown RBP eCLIP11.85□□□□□ -0.51
CASC19-270ENST00000641965 RIMBP3CA6NJZ7 1639 aa11.85□□□□□ -0.51
CASC19-270ENST00000641965 RIMBP3BA6NNM3 1639 aa11.85□□□□□ -0.51
CASC19-270ENST00000641965 RIMBP3Q9UFD9 1639 aa11.85□□□□□ -0.51
CASC19-270ENST00000641965 HECW1Q76N89 1606 aa11.84□□□□□ -0.51
CASC19-270ENST00000641965 UACAQ9BZF9 1416 aa11.84□□□□□ -0.51
CASC19-270ENST00000641965 FOXD4L1Q9NU39 408 aa11.83□□□□□ -0.52
CASC19-270ENST00000641965 PLB1Q6P1J6 1458 aa11.82□□□□□ -0.52
CASC19-270ENST00000641965 ABCC2Q92887 1545 aa11.82□□□□□ -0.52
CASC19-270ENST00000641965 NECTIN2Q92692 538 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms