RNA–Protein interactions for RNA: ENST00000641965.1

CASC19-270, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 2,329 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-270ENST00000641965 NISCHQ9Y2I1 1504 aa17.69■□□□□ 0.42
CASC19-270ENST00000641965 SLC24A1O60721 1099 aa16.14■□□□□ 0.17
CASC19-270ENST00000641965 CCDC180Q9P1Z9 1646 aa15.61■□□□□ 0.09
CASC19-270ENST00000641965 CHIC1Q5VXU3 224 aa15.29■□□□□ 0.04
CASC19-270ENST00000641965 EHMT2Q96KQ7 1210 aa15.15■□□□□ 0.02
CASC19-270ENST00000641965 PLPPR3Q6T4P5 718 aa14.95□□□□□ -0.02
CASC19-270ENST00000641965 ABCC9O60706 1549 aa14.83□□□□□ -0.04
CASC19-270ENST00000641965 ZCCHC6Q5VYS8 1495 aaKnown RBP14.81□□□□□ -0.04
CASC19-270ENST00000641965 DCAF1Q9Y4B6 1507 aa14.72□□□□□ -0.05
CASC19-270ENST00000641965 RTN4Q9NQC3 1192 aaKnown RBP14.68□□□□□ -0.06
CASC19-270ENST00000641965 MYO15BQ96JP2 1530 aa14.66□□□□□ -0.06
CASC19-270ENST00000641965 NACADO15069 1562 aa14.59□□□□□ -0.07
CASC19-270ENST00000641965 DCAF8L2P0C7V8 631 aa14.5□□□□□ -0.09
CASC19-270ENST00000641965 RB1CC1Q8TDY2 1594 aa14.49□□□□□ -0.09
CASC19-270ENST00000641965 DAXXQ9UER7 740 aaPredicted RBP14.48□□□□□ -0.09
CASC19-270ENST00000641965 AEBP2Q6ZN18 517 aaPredicted RBP14.47□□□□□ -0.09
CASC19-270ENST00000641965 NCBP3Q53F19 620 aaKnown RBP14.3□□□□□ -0.12
CASC19-270ENST00000641965 PRKCSHP14314 528 aaPredicted RBP14.19□□□□□ -0.14
CASC19-270ENST00000641965 KCNA4P22459 653 aa14.19□□□□□ -0.14
CASC19-270ENST00000641965 UNC13AQ9UPW8 1703 aa14.18□□□□□ -0.14
CASC19-270ENST00000641965 SCRIBQ14160 1630 aa14.18□□□□□ -0.14
CASC19-270ENST00000641965 CSRNP3Q8WYN3 585 aa14.08□□□□□ -0.16
CASC19-270ENST00000641965 PHF23Q9BUL5 403 aaPredicted RBP14.06□□□□□ -0.16
CASC19-270ENST00000641965 BICRAQ9NZM4 1560 aa14.05□□□□□ -0.16
CASC19-270ENST00000641965 SHROOM4Q9ULL8 1493 aa14.05□□□□□ -0.16
CASC19-270ENST00000641965 AMER1Q5JTC6 1135 aaPredicted RBP13.99□□□□□ -0.17
CASC19-270ENST00000641965 PABPN1Q86U42 306 aaKnown RBP eCLIP13.9□□□□□ -0.18
CASC19-270ENST00000641965 TIMELESSQ9UNS1 1208 aa13.83□□□□□ -0.2
CASC19-270ENST00000641965 APLP2Q06481 763 aa13.81□□□□□ -0.2
CASC19-270ENST00000641965 CECR2Q9BXF3 1484 aa13.7□□□□□ -0.22
CASC19-270ENST00000641965 BAZ1AQ9NRL2 1556 aaPredicted RBP13.68□□□□□ -0.22
CASC19-270ENST00000641965 SMARCA4P51532 1647 aa13.65□□□□□ -0.22
CASC19-270ENST00000641965 EIF4G1Q04637 1599 aaKnown RBP13.62□□□□□ -0.23
CASC19-270ENST00000641965 MROH2BQ7Z745 1585 aa13.61□□□□□ -0.23
CASC19-270ENST00000641965 ARXQ96QS3 562 aa13.6□□□□□ -0.23
CASC19-270ENST00000641965 RSF1Q96T23 1441 aaPredicted RBP13.59□□□□□ -0.23
CASC19-270ENST00000641965 PEG3Q9GZU2 1588 aa13.56□□□□□ -0.24
CASC19-270ENST00000641965 TULP1O00294 542 aaPredicted RBP13.55□□□□□ -0.24
CASC19-270ENST00000641965 SMARCA2P51531 1590 aa13.5□□□□□ -0.25
CASC19-270ENST00000641965 TAOK2Q9UL54 1235 aa13.5□□□□□ -0.25
CASC19-270ENST00000641965 WIZO95785 1651 aa13.48□□□□□ -0.25
CASC19-270ENST00000641965 ATAD2BQ9ULI0 1458 aa13.48□□□□□ -0.25
CASC19-270ENST00000641965 CC2D2AQ9P2K1 1620 aa13.48□□□□□ -0.25
CASC19-270ENST00000641965 TTBK1Q5TCY1 1321 aaPredicted RBP13.46□□□□□ -0.26
CASC19-270ENST00000641965 NCAPD3P42695 1498 aa13.45□□□□□ -0.26
CASC19-270ENST00000641965 PELP1Q8IZL8 1130 aaKnown RBP13.43□□□□□ -0.26
CASC19-270ENST00000641965 HMGXB3Q12766 1538 aa13.41□□□□□ -0.26
CASC19-270ENST00000641965 SUPT5HO00267 1087 aaKnown RBP13.4□□□□□ -0.26
CASC19-270ENST00000641965 TOP2AP11388 1531 aaKnown RBP13.39□□□□□ -0.27
CASC19-270ENST00000641965 ERICH6Q7L0X2 663 aa13.39□□□□□ -0.27
CASC19-270ENST00000641965 BAZ1BQ9UIG0 1483 aaKnown RBP13.36□□□□□ -0.27
CASC19-270ENST00000641965 KLHL34Q8N239 644 aa13.36□□□□□ -0.27
CASC19-270ENST00000641965 MYT1Q01538 1121 aa13.31□□□□□ -0.28
CASC19-270ENST00000641965 DNAJC5BQ9UF47 199 aa13.31□□□□□ -0.28
CASC19-270ENST00000641965 TPRNQ4KMQ1 711 aa13.3□□□□□ -0.28
CASC19-270ENST00000641965 CCDC88BA6NC98 1476 aa13.22□□□□□ -0.29
CASC19-270ENST00000641965 HOMEZQ8IX15 550 aa13.18□□□□□ -0.3
CASC19-270ENST00000641965 SLC4A1APQ9BWU0 796 aaKnown RBP13.16□□□□□ -0.3
CASC19-270ENST00000641965 BCANQ96GW7 911 aa13.13□□□□□ -0.31
CASC19-270ENST00000641965 PODXL2Q9NZ53 605 aa13.11□□□□□ -0.31
CASC19-270ENST00000641965 RANGAP1P46060 587 aaPredicted RBP13.1□□□□□ -0.31
CASC19-270ENST00000641965 CFTRP13569 1480 aa13.05□□□□□ -0.32
CASC19-270ENST00000641965 CADPSQ9ULU8 1353 aa13.05□□□□□ -0.32
CASC19-270ENST00000641965 PLCB2Q00722 1185 aa13.04□□□□□ -0.32
CASC19-270ENST00000641965 LAMC3Q9Y6N6 1575 aa13.03□□□□□ -0.32
CASC19-270ENST00000641965 PRDM2Q13029 1718 aa13.02□□□□□ -0.32
CASC19-270ENST00000641965 GTF3C3Q9Y5Q9 886 aa12.99□□□□□ -0.33
CASC19-270ENST00000641965 ZBTB22O15209 634 aa12.98□□□□□ -0.33
CASC19-270ENST00000641965 EIF5BO60841 1220 aaKnown RBP12.96□□□□□ -0.33
CASC19-270ENST00000641965 NESP48681 1621 aa12.94□□□□□ -0.34
CASC19-270ENST00000641965 PDS5BQ9NTI5 1447 aa12.91□□□□□ -0.34
CASC19-270ENST00000641965 HAP1P54257 671 aaPredicted RBP12.91□□□□□ -0.34
CASC19-270ENST00000641965 FANCD2Q9BXW9 1451 aa12.87□□□□□ -0.35
CASC19-270ENST00000641965 PLEKHG5O94827 1062 aa12.85□□□□□ -0.35
CASC19-270ENST00000641965 KIF21AQ7Z4S6 1674 aa12.84□□□□□ -0.35
CASC19-270ENST00000641965 CEP164Q9UPV0 1460 aa12.83□□□□□ -0.36
CASC19-270ENST00000641965 ADRA2BP18089 450 aa12.82□□□□□ -0.36
CASC19-270ENST00000641965 ABCC8Q09428 1581 aa12.79□□□□□ -0.36
CASC19-270ENST00000641965 WRNQ14191 1432 aaPredicted RBP eCLIP12.79□□□□□ -0.36
CASC19-270ENST00000641965 BIVM-ERCC5R4GMW8 1640 aa12.77□□□□□ -0.37
CASC19-270ENST00000641965 TOP2BQ02880 1626 aa12.76□□□□□ -0.37
CASC19-270ENST00000641965 MRC2Q9UBG0 1479 aa12.76□□□□□ -0.37
CASC19-270ENST00000641965 CUX1P39880 1505 aa12.76□□□□□ -0.37
CASC19-270ENST00000641965 DNMBPQ6XZF7 1577 aa12.75□□□□□ -0.37
CASC19-270ENST00000641965 ERCC6Q03468 1493 aa12.75□□□□□ -0.37
CASC19-270ENST00000641965 NPM2Q86SE8 214 aaKnown RBP12.74□□□□□ -0.37
CASC19-270ENST00000641965 SYNJ1O43426 1573 aa12.74□□□□□ -0.37
CASC19-270ENST00000641965 URB2Q14146 1524 aaKnown RBP12.74□□□□□ -0.37
CASC19-270ENST00000641965 THOC2Q8NI27 1593 aaKnown RBP12.72□□□□□ -0.37
CASC19-270ENST00000641965 TOPBP1Q92547 1522 aa12.72□□□□□ -0.37
CASC19-270ENST00000641965 WDR62O43379 1518 aa12.72□□□□□ -0.37
CASC19-270ENST00000641965 TMEM132AQ24JP5 1023 aa12.72□□□□□ -0.37
CASC19-270ENST00000641965 TRIM41Q8WV44 630 aa12.7□□□□□ -0.38
CASC19-270ENST00000641965 KDM2AQ9Y2K7 1162 aa12.66□□□□□ -0.38
CASC19-270ENST00000641965 TRIM26Q12899 539 aaPredicted RBP12.65□□□□□ -0.38
CASC19-270ENST00000641965 FGD5Q6ZNL6 1462 aa12.64□□□□□ -0.39
CASC19-270ENST00000641965 C14orf37Q86TY3 774 aa12.63□□□□□ -0.39
CASC19-270ENST00000641965 POLA1P09884 1462 aaPredicted RBP12.62□□□□□ -0.39
CASC19-270ENST00000641965 SOGA1O94964 1423 aa12.59□□□□□ -0.39
CASC19-270ENST00000641965 CUX2O14529 1486 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms