RNA–Protein interactions for RNA: ENST00000641756.1

PHGDH-226, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,132 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-226ENST00000641756 FHOD3Q2V2M9 1422 aa26.94■■□□□ 1.9
PHGDH-226ENST00000641756 TIAM1Q13009 1591 aa26.92■■□□□ 1.9
PHGDH-226ENST00000641756 FHAD1B1AJZ9 1412 aa26.92■■□□□ 1.9
PHGDH-226ENST00000641756 EFCAB5A4FU69 1503 aa26.91■■□□□ 1.9
PHGDH-226ENST00000641756 PCF11O94913 1555 aaKnown RBP26.9■■□□□ 1.9
PHGDH-226ENST00000641756 AQRO60306 1485 aaKnown RBP eCLIP26.88■■□□□ 1.891e-6■■□□□ 14.4
PHGDH-226ENST00000641756 PBRM1Q86U86 1689 aa26.87■■□□□ 1.89
PHGDH-226ENST00000641756 MAP3K1Q13233 1512 aa26.87■■□□□ 1.89
PHGDH-226ENST00000641756 RRBP1Q9P2E9 1410 aaKnown RBP26.86■■□□□ 1.89
PHGDH-226ENST00000641756 ATP1B4Q9UN42 357 aaPredicted RBP26.85■■□□□ 1.89
PHGDH-226ENST00000641756 WDR62O43379 1518 aa26.82■■□□□ 1.88
PHGDH-226ENST00000641756 LRRC9Q6ZRR7 1453 aa26.8■■□□□ 1.88
PHGDH-226ENST00000641756 CFAP43Q8NDM7 1665 aa26.8■■□□□ 1.88
PHGDH-226ENST00000641756 CCNB3Q8WWL7 1395 aa26.78■■□□□ 1.88
PHGDH-226ENST00000641756 FYCO1Q9BQS8 1478 aa26.77■■□□□ 1.88
PHGDH-226ENST00000641756 ERCC6Q03468 1493 aa26.76■■□□□ 1.87
PHGDH-226ENST00000641756 IFT140Q96RY7 1462 aa26.76■■□□□ 1.87
PHGDH-226ENST00000641756 ZNF608Q9ULD9 1512 aaPredicted RBP26.76■■□□□ 1.87
PHGDH-226ENST00000641756 CASKIN1Q8WXD9 1431 aa26.76■■□□□ 1.87
PHGDH-226ENST00000641756 SAMD9Q5K651 1589 aa26.75■■□□□ 1.87
PHGDH-226ENST00000641756 ADAMTS12P58397 1594 aa26.74■■□□□ 1.87
PHGDH-226ENST00000641756 GRIN2BQ13224 1484 aa26.74■■□□□ 1.87
PHGDH-226ENST00000641756 FMN1Q68DA7 1419 aa26.72■■□□□ 1.87
PHGDH-226ENST00000641756 SNAPC4Q5SXM2 1469 aa26.67■■□□□ 1.86
PHGDH-226ENST00000641756 PHLDB1Q86UU1 1377 aa26.67■■□□□ 1.86
PHGDH-226ENST00000641756 ITGAEP38570 1179 aa26.67■■□□□ 1.86
PHGDH-226ENST00000641756 THOC2Q8NI27 1593 aaKnown RBP26.64■■□□□ 1.85
PHGDH-226ENST00000641756 IQGAP2Q13576 1575 aa26.6■■□□□ 1.85
PHGDH-226ENST00000641756 EIF4G3O43432 1585 aaKnown RBP26.6■■□□□ 1.85
PHGDH-226ENST00000641756 LRRIQ1Q96JM4 1722 aa26.57■■□□□ 1.84
PHGDH-226ENST00000641756 DHX57Q6P158 1386 aaKnown RBP26.56■■□□□ 1.84
PHGDH-226ENST00000641756 FAM50AQ14320 339 aaKnown RBP26.54■■□□□ 1.84
PHGDH-226ENST00000641756 MTUS2Q5JR59 1369 aa26.49■■□□□ 1.83
PHGDH-226ENST00000641756 GRIN2AQ12879 1464 aa26.45■■□□□ 1.82
PHGDH-226ENST00000641756 UGGT2Q9NYU1 1516 aa26.43■■□□□ 1.82
PHGDH-226ENST00000641756 RAB3GAP2Q9H2M9 1393 aa26.42■■□□□ 1.82
PHGDH-226ENST00000641756 CLSPNQ9HAW4 1339 aa26.42■■□□□ 1.82
PHGDH-226ENST00000641756 KIAA0586Q9BVV6 1533 aa26.41■■□□□ 1.82
PHGDH-226ENST00000641756 MAGI1Q96QZ7 1491 aaPredicted RBP26.39■■□□□ 1.81
PHGDH-226ENST00000641756 HECW1Q76N89 1606 aa26.38■■□□□ 1.81
PHGDH-226ENST00000641756 FGD6Q6ZV73 1430 aa26.38■■□□□ 1.81
PHGDH-226ENST00000641756 SETD5Q9C0A6 1442 aa26.36■■□□□ 1.81
PHGDH-226ENST00000641756 ZNF316A6NFI3 1004 aaPredicted RBP26.36■■□□□ 1.81
PHGDH-226ENST00000641756 EHBP1L1Q8N3D4 1523 aa26.36■■□□□ 1.81
PHGDH-226ENST00000641756 NCOA2Q15596 1464 aa26.36■■□□□ 1.81
PHGDH-226ENST00000641756 CCDC18Q5T9S5 1454 aa26.36■■□□□ 1.81
PHGDH-226ENST00000641756 CHMP7Q8WUX9 453 aaPredicted RBP26.35■■□□□ 1.81
PHGDH-226ENST00000641756 MAGI3Q5TCQ9 1506 aa26.35■■□□□ 1.81
PHGDH-226ENST00000641756 DIEXFQ68CQ4 756 aaKnown RBP26.35■■□□□ 1.81
PHGDH-226ENST00000641756 SUPT6HQ7KZ85 1726 aaKnown RBP26.34■■□□□ 1.81
PHGDH-226ENST00000641756 KIAA0556O60303 1618 aa26.33■■□□□ 1.81
PHGDH-226ENST00000641756 SYNJ2O15056 1496 aa26.33■■□□□ 1.81
PHGDH-226ENST00000641756 DISP1Q96F81 1524 aa26.33■■□□□ 1.81
PHGDH-226ENST00000641756 FBLN2P98095 1184 aa26.33■■□□□ 1.81
PHGDH-226ENST00000641756 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.33■■□□□ 1.81
PHGDH-226ENST00000641756 EPRSP07814 1512 aaKnown RBP26.31■■□□□ 1.8
PHGDH-226ENST00000641756 ARID3CA6NKF2 412 aa26.3■■□□□ 1.8
PHGDH-226ENST00000641756 CEP170Q5SW79 1584 aa26.3■■□□□ 1.8
PHGDH-226ENST00000641756 CDK13Q14004 1512 aaKnown RBP26.29■■□□□ 1.8
PHGDH-226ENST00000641756 MYOM3Q5VTT5 1437 aa26.28■■□□□ 1.8
PHGDH-226ENST00000641756 ARHGEF11O15085 1522 aa26.23■■□□□ 1.79
PHGDH-226ENST00000641756 MAPKBP1O60336 1514 aa26.22■■□□□ 1.79
PHGDH-226ENST00000641756 PTPRKQ15262 1439 aa26.19■■□□□ 1.78
PHGDH-226ENST00000641756 PTPN23Q9H3S7 1636 aa26.17■■□□□ 1.78
PHGDH-226ENST00000641756 NUP160Q12769 1436 aa26.17■■□□□ 1.78
PHGDH-226ENST00000641756 RAPGEF6Q8TEU7 1601 aa26.16■■□□□ 1.78
PHGDH-226ENST00000641756 NUP153P49790 1475 aaKnown RBP26.14■■□□□ 1.78
PHGDH-226ENST00000641756 JPH4Q96JJ6 628 aa26.11■■□□□ 1.77
PHGDH-226ENST00000641756 HFM1A2PYH4 1435 aa26.07■■□□□ 1.76
PHGDH-226ENST00000641756 TCOF1Q13428 1488 aaKnown RBP26.07■■□□□ 1.76
PHGDH-226ENST00000641756 CARMIL2Q6F5E8 1435 aa26.06■■□□□ 1.76
PHGDH-226ENST00000641756 PLB1Q6P1J6 1458 aa26.06■■□□□ 1.76
PHGDH-226ENST00000641756 SIN3AQ96ST3 1273 aa26.03■■□□□ 1.76
PHGDH-226ENST00000641756 NAIPQ13075 1403 aa26.02■■□□□ 1.76
PHGDH-226ENST00000641756 MIA2Q96PC5 1412 aa26.01■■□□□ 1.75
PHGDH-226ENST00000641756 NEUROD1Q13562 356 aa26■■□□□ 1.75
PHGDH-226ENST00000641756 CHIC2Q9UKJ5 165 aa25.99■■□□□ 1.75
PHGDH-226ENST00000641756 CDK11AQ9UQ88 783 aaPredicted RBP25.98■■□□□ 1.75
PHGDH-226ENST00000641756 RRP7BPQ9NSQ0 103 aa25.96■■□□□ 1.75
PHGDH-226ENST00000641756 PRG4Q92954 1404 aaPredicted RBP25.96■■□□□ 1.75
PHGDH-226ENST00000641756 UACAQ9BZF9 1416 aa25.93■■□□□ 1.74
PHGDH-226ENST00000641756 CHD1O14646 1710 aa25.92■■□□□ 1.74
PHGDH-226ENST00000641756 TROQ12816 1431 aaPredicted RBP25.92■■□□□ 1.74
PHGDH-226ENST00000641756 GCC2Q8IWJ2 1684 aa25.88■■□□□ 1.73
PHGDH-226ENST00000641756 ABCA8O94911 1581 aa25.88■■□□□ 1.73
PHGDH-226ENST00000641756 ZNF644Q9H582 1327 aaPredicted RBP25.88■■□□□ 1.73
PHGDH-226ENST00000641756 MIER1Q8N108 512 aa25.87■■□□□ 1.73
PHGDH-226ENST00000641756 KIF14Q15058 1648 aa25.85■■□□□ 1.73
PHGDH-226ENST00000641756 DAPK1P53355 1430 aa25.83■■□□□ 1.73
PHGDH-226ENST00000641756 AKNAQ7Z591 1439 aa25.83■■□□□ 1.73
PHGDH-226ENST00000641756 KDM6BO15054 1643 aa25.83■■□□□ 1.73
PHGDH-226ENST00000641756 ADCY10Q96PN6 1610 aa25.81■■□□□ 1.72
PHGDH-226ENST00000641756 DNMT1P26358 1616 aaKnown RBP25.81■■□□□ 1.72
PHGDH-226ENST00000641756 ABCC5O15440 1437 aa25.8■■□□□ 1.72
PHGDH-226ENST00000641756 ATP10BO94823 1461 aa25.79■■□□□ 1.72
PHGDH-226ENST00000641756 TIMELESSQ9UNS1 1208 aa25.79■■□□□ 1.72
PHGDH-226ENST00000641756 GPATCH8Q9UKJ3 1502 aaKnown RBP25.78■■□□□ 1.72
PHGDH-226ENST00000641756 PTPRGP23470 1445 aa25.78■■□□□ 1.72
PHGDH-226ENST00000641756 ITSN2Q9NZM3 1697 aa25.78■■□□□ 1.72
PHGDH-226ENST00000641756 CFDP1Q9UEE9 299 aaPredicted RBP25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms