RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 RAPGEF2Q9Y4G8 1499 aa21.07■□□□□ 0.96
PHGDH-218ENST00000641491 EHMT2Q96KQ7 1210 aa21.06■□□□□ 0.96
PHGDH-218ENST00000641491 UBTFP17480 764 aaKnown RBP21.01■□□□□ 0.95
PHGDH-218ENST00000641491 GOLGA3Q08378 1498 aa21.01■□□□□ 0.95
PHGDH-218ENST00000641491 PRXQ9BXM0 1461 aa21.01■□□□□ 0.95
PHGDH-218ENST00000641491 KIF21BO75037 1637 aa20.99■□□□□ 0.95
PHGDH-218ENST00000641491 GRIN2AQ12879 1464 aa20.98■□□□□ 0.95
PHGDH-218ENST00000641491 CLASP1Q7Z460 1538 aa20.93■□□□□ 0.94
PHGDH-218ENST00000641491 NUP160Q12769 1436 aa20.81■□□□□ 0.92
PHGDH-218ENST00000641491 LOC105371045A0A1W2PR82 267 aa20.8■□□□□ 0.92
PHGDH-218ENST00000641491 RANGAP1P46060 587 aaPredicted RBP20.8■□□□□ 0.92
PHGDH-218ENST00000641491 KIAA0586Q9BVV6 1533 aa20.79■□□□□ 0.92
PHGDH-218ENST00000641491 CEP170Q5SW79 1584 aa20.78■□□□□ 0.92
PHGDH-218ENST00000641491 TNIKQ9UKE5 1360 aa20.77■□□□□ 0.92
PHGDH-218ENST00000641491 IQGAP2Q13576 1575 aa20.76■□□□□ 0.91
PHGDH-218ENST00000641491 CTTNBP2Q8WZ74 1663 aa20.76■□□□□ 0.91
PHGDH-218ENST00000641491 JPH4Q96JJ6 628 aa20.69■□□□□ 0.9
PHGDH-218ENST00000641491 CARMIL2Q6F5E8 1435 aa20.69■□□□□ 0.9
PHGDH-218ENST00000641491 CLIP1P30622 1438 aa20.63■□□□□ 0.89
PHGDH-218ENST00000641491 CEP162Q5TB80 1403 aa20.62■□□□□ 0.89
PHGDH-218ENST00000641491 PRG4Q92954 1404 aaPredicted RBP20.62■□□□□ 0.89
PHGDH-218ENST00000641491 EFCAB5A4FU69 1503 aa20.61■□□□□ 0.89
PHGDH-218ENST00000641491 UGGT2Q9NYU1 1516 aa20.6■□□□□ 0.89
PHGDH-218ENST00000641491 TTBK1Q5TCY1 1321 aaPredicted RBP20.58■□□□□ 0.89
PHGDH-218ENST00000641491 P3H3Q8IVL6 736 aa20.57■□□□□ 0.88
PHGDH-218ENST00000641491 ERCC6L2Q5T890 1561 aa20.55■□□□□ 0.88
PHGDH-218ENST00000641491 SHROOM2Q13796 1616 aa20.54■□□□□ 0.88
PHGDH-218ENST00000641491 KIAA0556O60303 1618 aa20.53■□□□□ 0.88
PHGDH-218ENST00000641491 FHOD3Q2V2M9 1422 aa20.5■□□□□ 0.87
PHGDH-218ENST00000641491 SAMD9Q5K651 1589 aa20.49■□□□□ 0.87
PHGDH-218ENST00000641491 ARHGAP35Q9NRY4 1499 aa20.49■□□□□ 0.87
PHGDH-218ENST00000641491 DISP1Q96F81 1524 aa20.48■□□□□ 0.87
PHGDH-218ENST00000641491 PTPRGP23470 1445 aa20.47■□□□□ 0.87
PHGDH-218ENST00000641491 FMN1Q68DA7 1419 aa20.47■□□□□ 0.87
PHGDH-218ENST00000641491 ATP1B4Q9UN42 357 aaPredicted RBP20.44■□□□□ 0.86
PHGDH-218ENST00000641491 KIF13AQ9H1H9 1805 aa20.42■□□□□ 0.86
PHGDH-218ENST00000641491 APLP2Q06481 763 aa20.39■□□□□ 0.85
PHGDH-218ENST00000641491 FAM69CQ0P6D2 419 aa20.37■□□□□ 0.85
PHGDH-218ENST00000641491 VPS8Q8N3P4 1428 aa20.35■□□□□ 0.85
PHGDH-218ENST00000641491 KDM4FA0A1W2PPD8 638 aa20.34■□□□□ 0.85
PHGDH-218ENST00000641491 ABCC10Q5T3U5 1492 aa20.33■□□□□ 0.85
PHGDH-218ENST00000641491 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.33■□□□□ 0.85
PHGDH-218ENST00000641491 NPM1P06748 294 aaKnown RBP eCLIP20.33■□□□□ 0.85
PHGDH-218ENST00000641491 HNRNPUL2Q1KMD3 747 aaKnown RBP20.33■□□□□ 0.85
PHGDH-218ENST00000641491 ILDR1Q86SU0 546 aaPredicted RBP20.32■□□□□ 0.84
PHGDH-218ENST00000641491 UACAQ9BZF9 1416 aa20.32■□□□□ 0.84
PHGDH-218ENST00000641491 HECW1Q76N89 1606 aa20.28■□□□□ 0.84
PHGDH-218ENST00000641491 FYCO1Q9BQS8 1478 aa20.28■□□□□ 0.84
PHGDH-218ENST00000641491 CASKIN1Q8WXD9 1431 aa20.27■□□□□ 0.84
PHGDH-218ENST00000641491 RAPGEF6Q8TEU7 1601 aa20.27■□□□□ 0.84
PHGDH-218ENST00000641491 PLB1Q6P1J6 1458 aa20.27■□□□□ 0.84
PHGDH-218ENST00000641491 ARID3CA6NKF2 412 aa20.25■□□□□ 0.83
PHGDH-218ENST00000641491 PCF11O94913 1555 aaKnown RBP20.25■□□□□ 0.83
PHGDH-218ENST00000641491 MAPKBP1O60336 1514 aa20.24■□□□□ 0.83
PHGDH-218ENST00000641491 ABCC2Q92887 1545 aa20.24■□□□□ 0.83
PHGDH-218ENST00000641491 CDK11AQ9UQ88 783 aaPredicted RBP20.23■□□□□ 0.83
PHGDH-218ENST00000641491 CCDC18Q5T9S5 1454 aa20.23■□□□□ 0.83
PHGDH-218ENST00000641491 ABCA8O94911 1581 aa20.21■□□□□ 0.83
PHGDH-218ENST00000641491 UHRF1BP1LA0JNW5 1464 aa20.21■□□□□ 0.83
PHGDH-218ENST00000641491 DIP2BQ9P265 1576 aa20.2■□□□□ 0.82
PHGDH-218ENST00000641491 KDM6BO15054 1643 aa20.17■□□□□ 0.82
PHGDH-218ENST00000641491 NUP153P49790 1475 aaKnown RBP20.16■□□□□ 0.82
PHGDH-218ENST00000641491 ADCY10Q96PN6 1610 aa20.14■□□□□ 0.81
PHGDH-218ENST00000641491 EPRSP07814 1512 aaKnown RBP20.14■□□□□ 0.81
PHGDH-218ENST00000641491 PLEKHD1A6NEE1 506 aa20.13■□□□□ 0.81
PHGDH-218ENST00000641491 MTUS2Q5JR59 1369 aa20.11■□□□□ 0.81
PHGDH-218ENST00000641491 CDK13Q14004 1512 aaKnown RBP20.1■□□□□ 0.81
PHGDH-218ENST00000641491 KDM5BQ9UGL1 1544 aa20.09■□□□□ 0.81
PHGDH-218ENST00000641491 ATP10BO94823 1461 aa20.07■□□□□ 0.8
PHGDH-218ENST00000641491 ZCCHC11Q5TAX3 1644 aaKnown RBP20.06■□□□□ 0.8
PHGDH-218ENST00000641491 TSPOAP1O95153 1857 aa20.06■□□□□ 0.8
PHGDH-218ENST00000641491 TIAM1Q13009 1591 aa20.05■□□□□ 0.8
PHGDH-218ENST00000641491 MAP3K1Q13233 1512 aa20.05■□□□□ 0.8
PHGDH-218ENST00000641491 CFAP43Q8NDM7 1665 aa20.03■□□□□ 0.8
PHGDH-218ENST00000641491 EHBP1L1Q8N3D4 1523 aa20.01■□□□□ 0.79
PHGDH-218ENST00000641491 ASXL2Q76L83 1435 aa20.01■□□□□ 0.79
PHGDH-218ENST00000641491 WDR7Q9Y4E6 1490 aa20■□□□□ 0.79
PHGDH-218ENST00000641491 KCNH8Q96L42 1107 aa20■□□□□ 0.79
PHGDH-218ENST00000641491 TROQ12816 1431 aaPredicted RBP19.99■□□□□ 0.79
PHGDH-218ENST00000641491 LRRC9Q6ZRR7 1453 aa19.98■□□□□ 0.79
PHGDH-218ENST00000641491 ADGRL1O94910 1474 aa19.96■□□□□ 0.79
PHGDH-218ENST00000641491 KIF14Q15058 1648 aa19.95■□□□□ 0.78
PHGDH-218ENST00000641491 PPARGC1BQ86YN6 1023 aaKnown RBP19.95■□□□□ 0.78
PHGDH-218ENST00000641491 LRRIQ1Q96JM4 1722 aa19.93■□□□□ 0.78
PHGDH-218ENST00000641491 KANK4Q5T7N3 995 aaPredicted RBP19.91■□□□□ 0.78
PHGDH-218ENST00000641491 SUPT6HQ7KZ85 1726 aaKnown RBP19.9■□□□□ 0.78
PHGDH-218ENST00000641491 GLI2P10070 1586 aa19.89■□□□□ 0.77
PHGDH-218ENST00000641491 CCNB3Q8WWL7 1395 aa19.89■□□□□ 0.77
PHGDH-218ENST00000641491 PPRC1Q5VV67 1664 aaKnown RBP19.87■□□□□ 0.77
PHGDH-218ENST00000641491 HECW2Q9P2P5 1572 aa19.86■□□□□ 0.77
PHGDH-218ENST00000641491 MAGI3Q5TCQ9 1506 aa19.86■□□□□ 0.77
PHGDH-218ENST00000641491 COL17A1Q9UMD9 1497 aaPredicted RBP19.86■□□□□ 0.77
PHGDH-218ENST00000641491 NCOA2Q15596 1464 aa19.85■□□□□ 0.77
PHGDH-218ENST00000641491 CD109Q6YHK3 1445 aa19.79■□□□□ 0.76
PHGDH-218ENST00000641491 CFDP1Q9UEE9 299 aaPredicted RBP19.79■□□□□ 0.76
PHGDH-218ENST00000641491 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.78■□□□□ 0.766e-6■■■■■ 38.2
PHGDH-218ENST00000641491 ARHGAP5Q13017 1502 aa19.76■□□□□ 0.75
PHGDH-218ENST00000641491 ITSN2Q9NZM3 1697 aa19.76■□□□□ 0.75
PHGDH-218ENST00000641491 TEX14Q8IWB6 1497 aa19.76■□□□□ 0.75
PHGDH-218ENST00000641491 ZNF777Q9ULD5 760 aaPredicted RBP19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms