RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 ZNF608Q9ULD9 1512 aaPredicted RBP15.13■□□□□ 0.01
PHGDH-215ENST00000641371 ARAP1Q96P48 1450 aa15.13■□□□□ 0.01
PHGDH-215ENST00000641371 APLP2Q06481 763 aa15.12■□□□□ 0.01
PHGDH-215ENST00000641371 SNAPC4Q5SXM2 1469 aa15.09■□□□□ 0.01
PHGDH-215ENST00000641371 SYNJ2O15056 1496 aa15.08■□□□□ 0.01
PHGDH-215ENST00000641371 MAP3K1Q13233 1512 aa15.07■□□□□ 0
PHGDH-215ENST00000641371 IQGAP2Q13576 1575 aa15.07■□□□□ 0
PHGDH-215ENST00000641371 GRIN2AQ12879 1464 aa15.06■□□□□ 0
PHGDH-215ENST00000641371 SAMD9Q5K651 1589 aa15.06■□□□□ 0
PHGDH-215ENST00000641371 FMN1Q68DA7 1419 aa15.04■□□□□ -0
PHGDH-215ENST00000641371 KIAA0586Q9BVV6 1533 aa15.03■□□□□ -0
PHGDH-215ENST00000641371 PCGF6Q9BYE7 350 aa15.03■□□□□ -0
PHGDH-215ENST00000641371 UGGT2Q9NYU1 1516 aa15.02□□□□□ -0.01
PHGDH-215ENST00000641371 RANGAP1P46060 587 aaPredicted RBP15□□□□□ -0.01
PHGDH-215ENST00000641371 FYCO1Q9BQS8 1478 aa15□□□□□ -0.01
PHGDH-215ENST00000641371 CHMP7Q8WUX9 453 aaPredicted RBP14.98□□□□□ -0.01
PHGDH-215ENST00000641371 NUP160Q12769 1436 aa14.97□□□□□ -0.01
PHGDH-215ENST00000641371 CASKIN1Q8WXD9 1431 aa14.96□□□□□ -0.01
PHGDH-215ENST00000641371 CFAP43Q8NDM7 1665 aa14.93□□□□□ -0.02
PHGDH-215ENST00000641371 FHOD3Q2V2M9 1422 aa14.93□□□□□ -0.02
PHGDH-215ENST00000641371 TIAM1Q13009 1591 aa14.93□□□□□ -0.02
PHGDH-215ENST00000641371 PCF11O94913 1555 aaKnown RBP14.92□□□□□ -0.02
PHGDH-215ENST00000641371 CEP170Q5SW79 1584 aa14.91□□□□□ -0.02
PHGDH-215ENST00000641371 CARMIL2Q6F5E8 1435 aa14.89□□□□□ -0.03
PHGDH-215ENST00000641371 KIAA0556O60303 1618 aa14.88□□□□□ -0.03
PHGDH-215ENST00000641371 CCDC18Q5T9S5 1454 aa14.88□□□□□ -0.03
PHGDH-215ENST00000641371 HECW1Q76N89 1606 aa14.87□□□□□ -0.03
PHGDH-215ENST00000641371 CHD1O14646 1710 aa14.85□□□□□ -0.03
PHGDH-215ENST00000641371 LRRC9Q6ZRR7 1453 aa14.84□□□□□ -0.03
PHGDH-215ENST00000641371 DISP1Q96F81 1524 aa14.84□□□□□ -0.03
PHGDH-215ENST00000641371 FBLN2P98095 1184 aa14.83□□□□□ -0.04
PHGDH-215ENST00000641371 P3H3Q8IVL6 736 aa14.83□□□□□ -0.04
PHGDH-215ENST00000641371 PPARGC1BQ86YN6 1023 aaKnown RBP14.82□□□□□ -0.04
PHGDH-215ENST00000641371 JPH4Q96JJ6 628 aa14.79□□□□□ -0.04
PHGDH-215ENST00000641371 EHBP1L1Q8N3D4 1523 aa14.78□□□□□ -0.04
PHGDH-215ENST00000641371 RRBP1Q9P2E9 1410 aaKnown RBP14.78□□□□□ -0.04
PHGDH-215ENST00000641371 SHROOM2Q13796 1616 aa14.77□□□□□ -0.05
PHGDH-215ENST00000641371 KANK4Q5T7N3 995 aaPredicted RBP14.76□□□□□ -0.05
PHGDH-215ENST00000641371 RAPGEF6Q8TEU7 1601 aa14.76□□□□□ -0.05
PHGDH-215ENST00000641371 MTUS2Q5JR59 1369 aa14.74□□□□□ -0.05
PHGDH-215ENST00000641371 ZEB1P37275 1124 aaPredicted RBP14.74□□□□□ -0.05
PHGDH-215ENST00000641371 ATP1B4Q9UN42 357 aaPredicted RBP14.74□□□□□ -0.05
PHGDH-215ENST00000641371 SUPT6HQ7KZ85 1726 aaKnown RBP14.74□□□□□ -0.05
PHGDH-215ENST00000641371 EPRSP07814 1512 aaKnown RBP14.73□□□□□ -0.05
PHGDH-215ENST00000641371 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.73□□□□□ -0.05
PHGDH-215ENST00000641371 LRRIQ1Q96JM4 1722 aa14.72□□□□□ -0.05
PHGDH-215ENST00000641371 HRCP23327 699 aa14.72□□□□□ -0.05
PHGDH-215ENST00000641371 CCNB3Q8WWL7 1395 aa14.72□□□□□ -0.05
PHGDH-215ENST00000641371 CLASP1Q7Z460 1538 aa14.71□□□□□ -0.05
PHGDH-215ENST00000641371 TTBK1Q5TCY1 1321 aaPredicted RBP14.71□□□□□ -0.05
PHGDH-215ENST00000641371 CDK11AQ9UQ88 783 aaPredicted RBP14.71□□□□□ -0.05
PHGDH-215ENST00000641371 PRG4Q92954 1404 aaPredicted RBP14.69□□□□□ -0.06
PHGDH-215ENST00000641371 ABCA8O94911 1581 aa14.68□□□□□ -0.06
PHGDH-215ENST00000641371 NUP153P49790 1475 aaKnown RBP14.66□□□□□ -0.06
PHGDH-215ENST00000641371 ARHGEF11O15085 1522 aa14.65□□□□□ -0.06
PHGDH-215ENST00000641371 PTPRGP23470 1445 aa14.65□□□□□ -0.06
PHGDH-215ENST00000641371 NCOA2Q15596 1464 aa14.63□□□□□ -0.07
PHGDH-215ENST00000641371 PHLDB1Q86UU1 1377 aa14.62□□□□□ -0.07
PHGDH-215ENST00000641371 MYOM3Q5VTT5 1437 aa14.62□□□□□ -0.07
PHGDH-215ENST00000641371 FGD6Q6ZV73 1430 aa14.61□□□□□ -0.07
PHGDH-215ENST00000641371 MIA2Q96PC5 1412 aa14.61□□□□□ -0.07
PHGDH-215ENST00000641371 CDK13Q14004 1512 aaKnown RBP14.61□□□□□ -0.07
PHGDH-215ENST00000641371 ADCY10Q96PN6 1610 aa14.6□□□□□ -0.07
PHGDH-215ENST00000641371 PLB1Q6P1J6 1458 aa14.6□□□□□ -0.07
PHGDH-215ENST00000641371 TROQ12816 1431 aaPredicted RBP14.59□□□□□ -0.07
PHGDH-215ENST00000641371 UACAQ9BZF9 1416 aa14.58□□□□□ -0.07
PHGDH-215ENST00000641371 MAGI3Q5TCQ9 1506 aa14.57□□□□□ -0.08
PHGDH-215ENST00000641371 ITSN2Q9NZM3 1697 aa14.56□□□□□ -0.08
PHGDH-215ENST00000641371 UHRF1BP1LA0JNW5 1464 aa14.56□□□□□ -0.08
PHGDH-215ENST00000641371 ABCC2Q92887 1545 aa14.56□□□□□ -0.08
PHGDH-215ENST00000641371 HNRNPUL2Q1KMD3 747 aaKnown RBP14.55□□□□□ -0.08
PHGDH-215ENST00000641371 TCOF1Q13428 1488 aaKnown RBP14.55□□□□□ -0.08
PHGDH-215ENST00000641371 KIF14Q15058 1648 aa14.53□□□□□ -0.08
PHGDH-215ENST00000641371 PTPN23Q9H3S7 1636 aa14.53□□□□□ -0.08
PHGDH-215ENST00000641371 ATP10BO94823 1461 aa14.53□□□□□ -0.08
PHGDH-215ENST00000641371 ACIN1Q9UKV3 1341 aaKnown RBP14.53□□□□□ -0.08
PHGDH-215ENST00000641371 PLEKHD1A6NEE1 506 aa14.53□□□□□ -0.08
PHGDH-215ENST00000641371 OSCARQ8IYS5 282 aa14.53□□□□□ -0.08
PHGDH-215ENST00000641371 CCER1Q8TC90 406 aaPredicted RBP14.53□□□□□ -0.08
PHGDH-215ENST00000641371 CLSPNQ9HAW4 1339 aa14.52□□□□□ -0.08
PHGDH-215ENST00000641371 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.52□□□□□ -0.09
PHGDH-215ENST00000641371 FAM50AQ14320 339 aaKnown RBP14.5□□□□□ -0.09
PHGDH-215ENST00000641371 AKNAQ7Z591 1439 aa14.47□□□□□ -0.09
PHGDH-215ENST00000641371 ERCC6L2Q5T890 1561 aa14.47□□□□□ -0.09
PHGDH-215ENST00000641371 SETD5Q9C0A6 1442 aa14.46□□□□□ -0.09
PHGDH-215ENST00000641371 KDM5BQ9UGL1 1544 aa14.46□□□□□ -0.1
PHGDH-215ENST00000641371 GPATCH8Q9UKJ3 1502 aaKnown RBP14.42□□□□□ -0.1
PHGDH-215ENST00000641371 ABCC10Q5T3U5 1492 aa14.42□□□□□ -0.1
PHGDH-215ENST00000641371 HFM1A2PYH4 1435 aa14.41□□□□□ -0.1
PHGDH-215ENST00000641371 ZCCHC11Q5TAX3 1644 aaKnown RBP14.41□□□□□ -0.1
PHGDH-215ENST00000641371 ARID3CA6NKF2 412 aa14.41□□□□□ -0.1
PHGDH-215ENST00000641371 CDC42BPAQ5VT25 1732 aa14.41□□□□□ -0.1
PHGDH-215ENST00000641371 DNMT1P26358 1616 aaKnown RBP14.41□□□□□ -0.1
PHGDH-215ENST00000641371 ROCK1Q13464 1354 aa14.39□□□□□ -0.11
PHGDH-215ENST00000641371 CFDP1Q9UEE9 299 aaPredicted RBP14.39□□□□□ -0.11
PHGDH-215ENST00000641371 RAB3GAP2Q9H2M9 1393 aa14.38□□□□□ -0.11
PHGDH-215ENST00000641371 ITGAEP38570 1179 aa14.38□□□□□ -0.11
PHGDH-215ENST00000641371 GCC2Q8IWJ2 1684 aa14.38□□□□□ -0.11
PHGDH-215ENST00000641371 PREX2Q70Z35 1606 aa14.37□□□□□ -0.11
PHGDH-215ENST00000641371 CAMSAP2Q08AD1 1489 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms