RNA–Protein interactions for RNA: ENST00000640219.1

HLA-C-210, Transcript of major histocompatibility complex, class I, C, humanhuman

BASIC

Gene HLA-C, Length 976 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-210ENST00000640219 JPH4Q96JJ6 628 aa24.87■■□□□ 1.57
HLA-C-210ENST00000640219 MAPKBP1O60336 1514 aa24.81■■□□□ 1.56
HLA-C-210ENST00000640219 KDM6BO15054 1643 aa24.81■■□□□ 1.56
HLA-C-210ENST00000640219 DIP2BQ9P265 1576 aa24.8■■□□□ 1.56
HLA-C-210ENST00000640219 ERICH3Q5RHP9 1530 aa24.8■■□□□ 1.56
HLA-C-210ENST00000640219 ADCY10Q96PN6 1610 aa24.71■■□□□ 1.55
HLA-C-210ENST00000640219 TOP2BQ02880 1626 aa24.7■■□□□ 1.54
HLA-C-210ENST00000640219 BIVM-ERCC5R4GMW8 1640 aa24.69■■□□□ 1.54
HLA-C-210ENST00000640219 TSPOAP1O95153 1857 aa24.67■■□□□ 1.54
HLA-C-210ENST00000640219 RUSC2Q8N2Y8 1516 aa24.66■■□□□ 1.54
HLA-C-210ENST00000640219 ADGRL1O94910 1474 aa24.53■■□□□ 1.52
HLA-C-210ENST00000640219 SUPT5HO00267 1087 aaKnown RBP24.53■■□□□ 1.52
HLA-C-210ENST00000640219 KIAA0586Q9BVV6 1533 aa24.51■■□□□ 1.51
HLA-C-210ENST00000640219 PTPRGP23470 1445 aa24.44■■□□□ 1.5
HLA-C-210ENST00000640219 TTBK1Q5TCY1 1321 aaPredicted RBP24.43■■□□□ 1.5
HLA-C-210ENST00000640219 HECW2Q9P2P5 1572 aa24.43■■□□□ 1.5
HLA-C-210ENST00000640219 ASXL2Q76L83 1435 aa24.4■■□□□ 1.5
HLA-C-210ENST00000640219 PPRC1Q5VV67 1664 aaKnown RBP24.4■■□□□ 1.5
HLA-C-210ENST00000640219 GLI2P10070 1586 aa24.39■■□□□ 1.5
HLA-C-210ENST00000640219 ABCC2Q92887 1545 aa24.39■■□□□ 1.49
HLA-C-210ENST00000640219 PLB1Q6P1J6 1458 aa24.38■■□□□ 1.49
HLA-C-210ENST00000640219 COL17A1Q9UMD9 1497 aaPredicted RBP24.34■■□□□ 1.49
HLA-C-210ENST00000640219 IGF1RP08069 1367 aa24.34■■□□□ 1.49
HLA-C-210ENST00000640219 TNIKQ9UKE5 1360 aa24.33■■□□□ 1.49
HLA-C-210ENST00000640219 CARMIL2Q6F5E8 1435 aa24.3■■□□□ 1.48
HLA-C-210ENST00000640219 CUL7Q14999 1698 aa24.27■■□□□ 1.48
HLA-C-210ENST00000640219 UHRF1BP1LA0JNW5 1464 aa24.25■■□□□ 1.47
HLA-C-210ENST00000640219 TEX14Q8IWB6 1497 aa24.25■■□□□ 1.47
HLA-C-210ENST00000640219 KIF27Q86VH2 1401 aa24.24■■□□□ 1.47
HLA-C-210ENST00000640219 EPRSP07814 1512 aaKnown RBP24.23■■□□□ 1.47
HLA-C-210ENST00000640219 MAP3K4Q9Y6R4 1608 aa24.22■■□□□ 1.47
HLA-C-210ENST00000640219 UACAQ9BZF9 1416 aa24.22■■□□□ 1.47
HLA-C-210ENST00000640219 FBXO41Q8TF61 875 aa24.21■■□□□ 1.47
HLA-C-210ENST00000640219 CARMIL1Q5VZK9 1371 aa24.16■■□□□ 1.46
HLA-C-210ENST00000640219 KDM5BQ9UGL1 1544 aa24.15■■□□□ 1.46
HLA-C-210ENST00000640219 IQGAP2Q13576 1575 aa24.13■■□□□ 1.45
HLA-C-210ENST00000640219 DISP1Q96F81 1524 aa24.09■■□□□ 1.45
HLA-C-210ENST00000640219 ZCCHC11Q5TAX3 1644 aaKnown RBP24.08■■□□□ 1.45
HLA-C-210ENST00000640219 WDR7Q9Y4E6 1490 aa24.02■■□□□ 1.44
HLA-C-210ENST00000640219 CD109Q6YHK3 1445 aa23.99■■□□□ 1.43
HLA-C-210ENST00000640219 MAGI3Q5TCQ9 1506 aa23.97■■□□□ 1.43
HLA-C-210ENST00000640219 UGGT2Q9NYU1 1516 aa23.95■■□□□ 1.43
HLA-C-210ENST00000640219 KCNH8Q96L42 1107 aa23.94■■□□□ 1.42
HLA-C-210ENST00000640219 KIF21BO75037 1637 aa23.94■■□□□ 1.42
HLA-C-210ENST00000640219 KIAA0556O60303 1618 aa23.92■■□□□ 1.42
HLA-C-210ENST00000640219 CFAP43Q8NDM7 1665 aa23.91■■□□□ 1.42
HLA-C-210ENST00000640219 PTPRMP28827 1452 aa23.85■■□□□ 1.41
HLA-C-210ENST00000640219 RAPGEF2Q9Y4G8 1499 aa23.84■■□□□ 1.41
HLA-C-210ENST00000640219 ARAP3Q8WWN8 1544 aa23.8■■□□□ 1.4
HLA-C-210ENST00000640219 ADAMTSL3P82987 1691 aa23.79■■□□□ 1.4
HLA-C-210ENST00000640219 LMTK3Q96Q04 1460 aa23.76■■□□□ 1.39
HLA-C-210ENST00000640219 ABCA8O94911 1581 aa23.76■■□□□ 1.39
HLA-C-210ENST00000640219 PCF11O94913 1555 aaKnown RBP23.74■■□□□ 1.39
HLA-C-210ENST00000640219 GOLGA3Q08378 1498 aa23.72■■□□□ 1.39
HLA-C-210ENST00000640219 PHLDB1Q86UU1 1377 aa23.69■■□□□ 1.38
HLA-C-210ENST00000640219 RAPGEF3O95398 923 aa23.69■■□□□ 1.38
HLA-C-210ENST00000640219 ARID4BQ4LE39 1312 aaPredicted RBP23.68■■□□□ 1.38
HLA-C-210ENST00000640219 BCORL1Q5H9F3 1711 aa23.66■■□□□ 1.38
HLA-C-210ENST00000640219 MADDQ8WXG6 1647 aa23.65■■□□□ 1.38
HLA-C-210ENST00000640219 ARID3CA6NKF2 412 aa23.64■■□□□ 1.37
HLA-C-210ENST00000640219 CTTNBP2Q8WZ74 1663 aa23.64■■□□□ 1.37
HLA-C-210ENST00000640219 HSPA2P54652 639 aa23.6■■□□□ 1.37
HLA-C-210ENST00000640219 CERKQ8TCT0 537 aa23.6■■□□□ 1.37
HLA-C-210ENST00000640219 ABCA9Q8IUA7 1624 aa23.59■■□□□ 1.37
HLA-C-210ENST00000640219 FAM9AQ8IZU1 332 aaPredicted RBP23.59■■□□□ 1.37
HLA-C-210ENST00000640219 ATP10BO94823 1461 aa23.59■■□□□ 1.37
HLA-C-210ENST00000640219 NEO1Q92859 1461 aa23.57■■□□□ 1.36
HLA-C-210ENST00000640219 RIMS1Q86UR5 1692 aaKnown RBP23.54■■□□□ 1.36
HLA-C-210ENST00000640219 FRMPD1Q5SYB0 1578 aa23.53■■□□□ 1.36
HLA-C-210ENST00000640219 PLPPR3Q6T4P5 718 aa23.53■■□□□ 1.36
HLA-C-210ENST00000640219 ILDR2Q71H61 639 aa23.53■■□□□ 1.36
HLA-C-210ENST00000640219 SOCS7O14512 581 aa23.52■■□□□ 1.36
HLA-C-210ENST00000640219 DISP3Q9P2K9 1392 aa23.52■■□□□ 1.36
HLA-C-210ENST00000640219 P3H3Q8IVL6 736 aa23.5■■□□□ 1.35
HLA-C-210ENST00000640219 ARHGEF40Q8TER5 1519 aa23.47■■□□□ 1.35
HLA-C-210ENST00000640219 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.45■■□□□ 1.34
HLA-C-210ENST00000640219 HNRNPUL2Q1KMD3 747 aaKnown RBP23.45■■□□□ 1.34
HLA-C-210ENST00000640219 POGZQ7Z3K3 1410 aa23.43■■□□□ 1.34
HLA-C-210ENST00000640219 DENND4BO75064 1496 aaPredicted RBP23.43■■□□□ 1.34
HLA-C-210ENST00000640219 FANCAO15360 1455 aa23.39■■□□□ 1.34
HLA-C-210ENST00000640219 AKNAQ7Z591 1439 aa23.39■■□□□ 1.33
HLA-C-210ENST00000640219 PRXQ9BXM0 1461 aa23.38■■□□□ 1.33
HLA-C-210ENST00000640219 FHOD3Q2V2M9 1422 aa23.37■■□□□ 1.33
HLA-C-210ENST00000640219 RICTORQ6R327 1708 aa23.36■■□□□ 1.33
HLA-C-210ENST00000640219 RAPGEF6Q8TEU7 1601 aa23.36■■□□□ 1.33
HLA-C-210ENST00000640219 MLECQ14165 292 aa23.35■■□□□ 1.33
HLA-C-210ENST00000640219 ZFYVE16Q7Z3T8 1539 aa23.31■■□□□ 1.32
HLA-C-210ENST00000640219 YEATS2Q9ULM3 1422 aa23.31■■□□□ 1.32
HLA-C-210ENST00000640219 SIGLEC1Q9BZZ2 1709 aa23.3■■□□□ 1.32
HLA-C-210ENST00000640219 EFCAB5A4FU69 1503 aa23.29■■□□□ 1.32
HLA-C-210ENST00000640219 ZMYM4Q5VZL5 1548 aa23.29■■□□□ 1.32
HLA-C-210ENST00000640219 CFAP74Q9C0B2 1584 aa23.28■■□□□ 1.32
HLA-C-210ENST00000640219 PLEKHD1A6NEE1 506 aa23.28■■□□□ 1.32
HLA-C-210ENST00000640219 DMRT2Q9Y5R5 561 aa23.28■■□□□ 1.32
HLA-C-210ENST00000640219 NUP153P49790 1475 aaKnown RBP23.28■■□□□ 1.32
HLA-C-210ENST00000640219 TTC37Q6PGP7 1564 aa23.27■■□□□ 1.32
HLA-C-210ENST00000640219 FER1L4A9Z1Z3 1794 aa23.27■■□□□ 1.32
HLA-C-210ENST00000640219 SAMD9Q5K651 1589 aa23.27■■□□□ 1.32
HLA-C-210ENST00000640219 MAGI2Q86UL8 1455 aa23.26■■□□□ 1.31
HLA-C-210ENST00000640219 SPATA31D1Q6ZQQ2 1576 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms