RNA–Protein interactions for RNA: ENST00000639277.1

GFAP-233, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5 BASIC

Gene GFAP, Length 1,783 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-233ENST00000639277 OSCARQ8IYS5 282 aa25.18■■□□□ 1.62
GFAP-233ENST00000639277 CHD1O14646 1710 aa25.18■■□□□ 1.62
GFAP-233ENST00000639277 GAPVD1Q14C86 1478 aa25.17■■□□□ 1.62
GFAP-233ENST00000639277 APLP2Q06481 763 aa25.16■■□□□ 1.62
GFAP-233ENST00000639277 SNAPC4Q5SXM2 1469 aa25.15■■□□□ 1.62
GFAP-233ENST00000639277 CCER1Q8TC90 406 aaPredicted RBP25.13■■□□□ 1.61
GFAP-233ENST00000639277 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.13■■□□□ 1.61
GFAP-233ENST00000639277 CTTNBP2Q8WZ74 1663 aa25.12■■□□□ 1.61
GFAP-233ENST00000639277 PBRM1Q86U86 1689 aa25.11■■□□□ 1.61
GFAP-233ENST00000639277 GRIN2BQ13224 1484 aa25.08■■□□□ 1.61
GFAP-233ENST00000639277 FBLN2P98095 1184 aa25.08■■□□□ 1.6
GFAP-233ENST00000639277 EFCAB5A4FU69 1503 aa25.01■■□□□ 1.59
GFAP-233ENST00000639277 MAGI1Q96QZ7 1491 aaPredicted RBP25■■□□□ 1.59
GFAP-233ENST00000639277 MAP3K1Q13233 1512 aa24.95■■□□□ 1.58
GFAP-233ENST00000639277 SYNJ2O15056 1496 aa24.94■■□□□ 1.58
GFAP-233ENST00000639277 ADAMTS12P58397 1594 aa24.93■■□□□ 1.58
GFAP-233ENST00000639277 CHMP7Q8WUX9 453 aaPredicted RBP24.93■■□□□ 1.58
GFAP-233ENST00000639277 FHAD1B1AJZ9 1412 aa24.92■■□□□ 1.58
GFAP-233ENST00000639277 RIMBP3CA6NJZ7 1639 aa24.91■■□□□ 1.58
GFAP-233ENST00000639277 RIMBP3BA6NNM3 1639 aa24.91■■□□□ 1.58
GFAP-233ENST00000639277 RIMBP3Q9UFD9 1639 aa24.91■■□□□ 1.58
GFAP-233ENST00000639277 TIAM1Q13009 1591 aa24.87■■□□□ 1.57
GFAP-233ENST00000639277 SAMD9Q5K651 1589 aa24.87■■□□□ 1.57
GFAP-233ENST00000639277 ARHGEF11O15085 1522 aa24.86■■□□□ 1.57
GFAP-233ENST00000639277 CLASP1Q7Z460 1538 aa24.86■■□□□ 1.57
GFAP-233ENST00000639277 PCF11O94913 1555 aaKnown RBP24.84■■□□□ 1.57
GFAP-233ENST00000639277 KANK4Q5T7N3 995 aaPredicted RBP24.84■■□□□ 1.57
GFAP-233ENST00000639277 CFAP43Q8NDM7 1665 aa24.83■■□□□ 1.57
GFAP-233ENST00000639277 HNRNPUL2Q1KMD3 747 aaKnown RBP24.82■■□□□ 1.56
GFAP-233ENST00000639277 FHOD3Q2V2M9 1422 aa24.81■■□□□ 1.56
GFAP-233ENST00000639277 GRIN2AQ12879 1464 aa24.81■■□□□ 1.56
GFAP-233ENST00000639277 FYCO1Q9BQS8 1478 aa24.79■■□□□ 1.56
GFAP-233ENST00000639277 CEP170Q5SW79 1584 aa24.77■■□□□ 1.56
GFAP-233ENST00000639277 CASKIN1Q8WXD9 1431 aa24.77■■□□□ 1.56
GFAP-233ENST00000639277 FMN1Q68DA7 1419 aa24.76■■□□□ 1.55
GFAP-233ENST00000639277 RRBP1Q9P2E9 1410 aaKnown RBP24.76■■□□□ 1.55
GFAP-233ENST00000639277 IQGAP2Q13576 1575 aa24.72■■□□□ 1.55
GFAP-233ENST00000639277 LRRC9Q6ZRR7 1453 aa24.72■■□□□ 1.55
GFAP-233ENST00000639277 P3H3Q8IVL6 736 aa24.72■■□□□ 1.55
GFAP-233ENST00000639277 NUP160Q12769 1436 aa24.71■■□□□ 1.55
GFAP-233ENST00000639277 ERCC6L2Q5T890 1561 aa24.67■■□□□ 1.54
GFAP-233ENST00000639277 CYB5RLQ6IPT4 315 aa24.65■■□□□ 1.54
GFAP-233ENST00000639277 UGGT2Q9NYU1 1516 aa24.63■■□□□ 1.53
GFAP-233ENST00000639277 CCNB3Q8WWL7 1395 aa24.61■■□□□ 1.53
GFAP-233ENST00000639277 KIAA0586Q9BVV6 1533 aa24.59■■□□□ 1.53
GFAP-233ENST00000639277 LRRIQ1Q96JM4 1722 aa24.59■■□□□ 1.53
GFAP-233ENST00000639277 SHROOM2Q13796 1616 aa24.55■■□□□ 1.52
GFAP-233ENST00000639277 CLSPNQ9HAW4 1339 aa24.52■■□□□ 1.52
GFAP-233ENST00000639277 PHLDB1Q86UU1 1377 aa24.5■■□□□ 1.51
GFAP-233ENST00000639277 ATP1B4Q9UN42 357 aaPredicted RBP24.49■■□□□ 1.51
GFAP-233ENST00000639277 HECW1Q76N89 1606 aa24.48■■□□□ 1.51
GFAP-233ENST00000639277 KIAA0556O60303 1618 aa24.48■■□□□ 1.51
GFAP-233ENST00000639277 CCDC18Q5T9S5 1454 aa24.46■■□□□ 1.51
GFAP-233ENST00000639277 DHX57Q6P158 1386 aaKnown RBP24.46■■□□□ 1.51
GFAP-233ENST00000639277 DISP1Q96F81 1524 aa24.45■■□□□ 1.51
GFAP-233ENST00000639277 JPH4Q96JJ6 628 aa24.45■■□□□ 1.5
GFAP-233ENST00000639277 EHBP1L1Q8N3D4 1523 aa24.42■■□□□ 1.5
GFAP-233ENST00000639277 PRG4Q92954 1404 aaPredicted RBP24.42■■□□□ 1.5
GFAP-233ENST00000639277 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.4■■□□□ 1.5
GFAP-233ENST00000639277 ZNF316A6NFI3 1004 aaPredicted RBP24.4■■□□□ 1.5
GFAP-233ENST00000639277 DIEXFQ68CQ4 756 aaKnown RBP24.39■■□□□ 1.5
GFAP-233ENST00000639277 SUPT6HQ7KZ85 1726 aaKnown RBP24.39■■□□□ 1.49
GFAP-233ENST00000639277 MTUS2Q5JR59 1369 aa24.38■■□□□ 1.49
GFAP-233ENST00000639277 EPRSP07814 1512 aaKnown RBP24.36■■□□□ 1.49
GFAP-233ENST00000639277 MAGI3Q5TCQ9 1506 aa24.33■■□□□ 1.49
GFAP-233ENST00000639277 NCOA2Q15596 1464 aa24.32■■□□□ 1.48
GFAP-233ENST00000639277 FGD6Q6ZV73 1430 aa24.32■■□□□ 1.48
GFAP-233ENST00000639277 RAPGEF6Q8TEU7 1601 aa24.3■■□□□ 1.48
GFAP-233ENST00000639277 ITGAEP38570 1179 aa24.29■■□□□ 1.48
GFAP-233ENST00000639277 RAB3GAP2Q9H2M9 1393 aa24.26■■□□□ 1.47
GFAP-233ENST00000639277 MYOM3Q5VTT5 1437 aa24.26■■□□□ 1.47
GFAP-233ENST00000639277 CDK13Q14004 1512 aaKnown RBP24.26■■□□□ 1.47
GFAP-233ENST00000639277 SETD5Q9C0A6 1442 aa24.26■■□□□ 1.47
GFAP-233ENST00000639277 CARMIL2Q6F5E8 1435 aa24.24■■□□□ 1.47
GFAP-233ENST00000639277 FAM50AQ14320 339 aaKnown RBP24.24■■□□□ 1.47
GFAP-233ENST00000639277 NUP153P49790 1475 aaKnown RBP24.23■■□□□ 1.47
GFAP-233ENST00000639277 PTPN23Q9H3S7 1636 aa24.17■■□□□ 1.46
GFAP-233ENST00000639277 TCOF1Q13428 1488 aaKnown RBP24.15■■□□□ 1.46
GFAP-233ENST00000639277 MAPKBP1O60336 1514 aa24.14■■□□□ 1.46
GFAP-233ENST00000639277 ADCY10Q96PN6 1610 aa24.14■■□□□ 1.45
GFAP-233ENST00000639277 MIA2Q96PC5 1412 aa24.11■■□□□ 1.45
GFAP-233ENST00000639277 TRHP20396 242 aaPredicted RBP24.11■■□□□ 1.45
GFAP-233ENST00000639277 PLB1Q6P1J6 1458 aa24.1■■□□□ 1.45
GFAP-233ENST00000639277 ABCA8O94911 1581 aa24.1■■□□□ 1.45
GFAP-233ENST00000639277 PTPRGP23470 1445 aa24.07■■□□□ 1.44
GFAP-233ENST00000639277 PTPRKQ15262 1439 aa24.06■■□□□ 1.44
GFAP-233ENST00000639277 CDK11AQ9UQ88 783 aaPredicted RBP24.05■■□□□ 1.44
GFAP-233ENST00000639277 HFM1A2PYH4 1435 aa24.04■■□□□ 1.44
GFAP-233ENST00000639277 TROQ12816 1431 aaPredicted RBP24.02■■□□□ 1.44
GFAP-233ENST00000639277 ARID3CA6NKF2 412 aa24.01■■□□□ 1.43
GFAP-233ENST00000639277 AKNAQ7Z591 1439 aa23.96■■□□□ 1.43
GFAP-233ENST00000639277 ITSN2Q9NZM3 1697 aa23.96■■□□□ 1.43
GFAP-233ENST00000639277 GCC2Q8IWJ2 1684 aa23.95■■□□□ 1.43
GFAP-233ENST00000639277 NAIPQ13075 1403 aa23.95■■□□□ 1.43
GFAP-233ENST00000639277 KIF13AQ9H1H9 1805 aa23.95■■□□□ 1.42
GFAP-233ENST00000639277 CENPBP07199 599 aaPredicted RBP23.93■■□□□ 1.42
GFAP-233ENST00000639277 KIF14Q15058 1648 aa23.92■■□□□ 1.42
GFAP-233ENST00000639277 ATP10BO94823 1461 aa23.92■■□□□ 1.42
GFAP-233ENST00000639277 ACIN1Q9UKV3 1341 aaKnown RBP23.91■■□□□ 1.42
GFAP-233ENST00000639277 UACAQ9BZF9 1416 aa23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms