RNA–Protein interactions for RNA: ENST00000639054.1

PAX6-250, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 2,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-250ENST00000639054 CLIP1P30622 1438 aa18.82■□□□□ 0.6
PAX6-250ENST00000639054 CTTNBP2Q8WZ74 1663 aa18.82■□□□□ 0.6
PAX6-250ENST00000639054 CHD1O14646 1710 aa18.79■□□□□ 0.6
PAX6-250ENST00000639054 CEP170Q5SW79 1584 aa18.77■□□□□ 0.6
PAX6-250ENST00000639054 P3H3Q8IVL6 736 aa18.74■□□□□ 0.59
PAX6-250ENST00000639054 ARHGAP35Q9NRY4 1499 aa18.73■□□□□ 0.59
PAX6-250ENST00000639054 NUP160Q12769 1436 aa18.71■□□□□ 0.59
PAX6-250ENST00000639054 IQGAP2Q13576 1575 aa18.71■□□□□ 0.59
PAX6-250ENST00000639054 KIAA0586Q9BVV6 1533 aa18.7■□□□□ 0.58
PAX6-250ENST00000639054 ARAP1Q96P48 1450 aa18.69■□□□□ 0.58
PAX6-250ENST00000639054 FHOD3Q2V2M9 1422 aa18.64■□□□□ 0.57
PAX6-250ENST00000639054 JPH4Q96JJ6 628 aa18.61■□□□□ 0.57
PAX6-250ENST00000639054 SAMD9Q5K651 1589 aa18.61■□□□□ 0.57
PAX6-250ENST00000639054 EFCAB5A4FU69 1503 aa18.6■□□□□ 0.57
PAX6-250ENST00000639054 UGGT2Q9NYU1 1516 aa18.6■□□□□ 0.57
PAX6-250ENST00000639054 VPS8Q8N3P4 1428 aa18.59■□□□□ 0.57
PAX6-250ENST00000639054 PPARGC1BQ86YN6 1023 aaKnown RBP18.58■□□□□ 0.57
PAX6-250ENST00000639054 TTBK1Q5TCY1 1321 aaPredicted RBP18.57■□□□□ 0.56
PAX6-250ENST00000639054 DISP1Q96F81 1524 aa18.57■□□□□ 0.56
PAX6-250ENST00000639054 CLASP1Q7Z460 1538 aa18.53■□□□□ 0.56
PAX6-250ENST00000639054 KIAA0556O60303 1618 aa18.53■□□□□ 0.56
PAX6-250ENST00000639054 OSCARQ8IYS5 282 aa18.51■□□□□ 0.55
PAX6-250ENST00000639054 PRG4Q92954 1404 aaPredicted RBP18.51■□□□□ 0.55
PAX6-250ENST00000639054 ATP1B4Q9UN42 357 aaPredicted RBP18.49■□□□□ 0.55
PAX6-250ENST00000639054 SHROOM2Q13796 1616 aa18.48■□□□□ 0.55
PAX6-250ENST00000639054 ERCC6L2Q5T890 1561 aa18.48■□□□□ 0.55
PAX6-250ENST00000639054 CARMIL2Q6F5E8 1435 aa18.46■□□□□ 0.55
PAX6-250ENST00000639054 PCF11O94913 1555 aaKnown RBP18.46■□□□□ 0.55
PAX6-250ENST00000639054 FMN1Q68DA7 1419 aa18.45■□□□□ 0.54
PAX6-250ENST00000639054 APLP2Q06481 763 aa18.41■□□□□ 0.54
PAX6-250ENST00000639054 CASKIN1Q8WXD9 1431 aa18.4■□□□□ 0.54
PAX6-250ENST00000639054 ARID3CA6NKF2 412 aa18.39■□□□□ 0.54
PAX6-250ENST00000639054 KANK4Q5T7N3 995 aaPredicted RBP18.37■□□□□ 0.53
PAX6-250ENST00000639054 FYCO1Q9BQS8 1478 aa18.37■□□□□ 0.53
PAX6-250ENST00000639054 PLB1Q6P1J6 1458 aa18.36■□□□□ 0.53
PAX6-250ENST00000639054 LRRIQ1Q96JM4 1722 aa18.36■□□□□ 0.53
PAX6-250ENST00000639054 PTPRGP23470 1445 aa18.35■□□□□ 0.53
PAX6-250ENST00000639054 RAPGEF6Q8TEU7 1601 aa18.31■□□□□ 0.52
PAX6-250ENST00000639054 TIAM1Q13009 1591 aa18.31■□□□□ 0.52
PAX6-250ENST00000639054 HECW1Q76N89 1606 aa18.29■□□□□ 0.52
PAX6-250ENST00000639054 NUP153P49790 1475 aaKnown RBP18.29■□□□□ 0.52
PAX6-250ENST00000639054 CDK13Q14004 1512 aaKnown RBP18.28■□□□□ 0.52
PAX6-250ENST00000639054 ABCA8O94911 1581 aa18.27■□□□□ 0.52
PAX6-250ENST00000639054 CFAP43Q8NDM7 1665 aa18.27■□□□□ 0.52
PAX6-250ENST00000639054 EPRSP07814 1512 aaKnown RBP18.27■□□□□ 0.52
PAX6-250ENST00000639054 MAP3K1Q13233 1512 aa18.25■□□□□ 0.51
PAX6-250ENST00000639054 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.24■□□□□ 0.51
PAX6-250ENST00000639054 HNRNPUL2Q1KMD3 747 aaKnown RBP18.24■□□□□ 0.51
PAX6-250ENST00000639054 LRRC9Q6ZRR7 1453 aa18.24■□□□□ 0.51
PAX6-250ENST00000639054 UACAQ9BZF9 1416 aa18.23■□□□□ 0.51
PAX6-250ENST00000639054 CCDC18Q5T9S5 1454 aa18.21■□□□□ 0.51
PAX6-250ENST00000639054 MAGI3Q5TCQ9 1506 aa18.21■□□□□ 0.51
PAX6-250ENST00000639054 ARHGEF11O15085 1522 aa18.2■□□□□ 0.5
PAX6-250ENST00000639054 PCGF6Q9BYE7 350 aa18.2■□□□□ 0.5
PAX6-250ENST00000639054 TRIM26Q12899 539 aaPredicted RBP18.19■□□□□ 0.5
PAX6-250ENST00000639054 ATP10BO94823 1461 aa18.18■□□□□ 0.5
PAX6-250ENST00000639054 MTUS2Q5JR59 1369 aa18.18■□□□□ 0.5
PAX6-250ENST00000639054 ABCC2Q92887 1545 aa18.17■□□□□ 0.5
PAX6-250ENST00000639054 RIMBP3CA6NJZ7 1639 aa18.14■□□□□ 0.49
PAX6-250ENST00000639054 RIMBP3BA6NNM3 1639 aa18.14■□□□□ 0.49
PAX6-250ENST00000639054 RIMBP3Q9UFD9 1639 aa18.14■□□□□ 0.49
PAX6-250ENST00000639054 ADCY10Q96PN6 1610 aa18.13■□□□□ 0.49
PAX6-250ENST00000639054 UHRF1BP1LA0JNW5 1464 aa18.11■□□□□ 0.49
PAX6-250ENST00000639054 CYB5RLQ6IPT4 315 aa18.11■□□□□ 0.49
PAX6-250ENST00000639054 EHBP1L1Q8N3D4 1523 aa18.11■□□□□ 0.49
PAX6-250ENST00000639054 PHLDB1Q86UU1 1377 aa18.1■□□□□ 0.49
PAX6-250ENST00000639054 CDK11AQ9UQ88 783 aaPredicted RBP18.09■□□□□ 0.49
PAX6-250ENST00000639054 NCOA2Q15596 1464 aa18.07■□□□□ 0.48
PAX6-250ENST00000639054 PLEKHD1A6NEE1 506 aa18.07■□□□□ 0.48
PAX6-250ENST00000639054 ZCCHC11Q5TAX3 1644 aaKnown RBP18.07■□□□□ 0.48
PAX6-250ENST00000639054 KDM5BQ9UGL1 1544 aa18.06■□□□□ 0.48
PAX6-250ENST00000639054 TROQ12816 1431 aaPredicted RBP18.06■□□□□ 0.48
PAX6-250ENST00000639054 SUPT6HQ7KZ85 1726 aaKnown RBP18.06■□□□□ 0.48
PAX6-250ENST00000639054 KIF14Q15058 1648 aa18.04■□□□□ 0.48
PAX6-250ENST00000639054 KCNH8Q96L42 1107 aa18.01■□□□□ 0.47
PAX6-250ENST00000639054 RRBP1Q9P2E9 1410 aaKnown RBP17.99■□□□□ 0.47
PAX6-250ENST00000639054 CCNB3Q8WWL7 1395 aa17.97■□□□□ 0.47
PAX6-250ENST00000639054 NPM1P06748 294 aaKnown RBP eCLIP17.97■□□□□ 0.47
PAX6-250ENST00000639054 MYOM3Q5VTT5 1437 aa17.96■□□□□ 0.47
PAX6-250ENST00000639054 FAM50AQ14320 339 aaKnown RBP17.96■□□□□ 0.47
PAX6-250ENST00000639054 FGD6Q6ZV73 1430 aa17.95■□□□□ 0.46
PAX6-250ENST00000639054 ITGAEP38570 1179 aa17.94■□□□□ 0.46
PAX6-250ENST00000639054 ASXL2Q76L83 1435 aa17.93■□□□□ 0.46
PAX6-250ENST00000639054 ABCC10Q5T3U5 1492 aa17.93■□□□□ 0.46
PAX6-250ENST00000639054 WDR7Q9Y4E6 1490 aa17.91■□□□□ 0.46
PAX6-250ENST00000639054 GPATCH8Q9UKJ3 1502 aaKnown RBP17.9■□□□□ 0.46
PAX6-250ENST00000639054 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.9■□□□□ 0.46
PAX6-250ENST00000639054 ZNF644Q9H582 1327 aaPredicted RBP17.89■□□□□ 0.46
PAX6-250ENST00000639054 TTC37Q6PGP7 1564 aa17.89■□□□□ 0.46
PAX6-250ENST00000639054 CDC42BPAQ5VT25 1732 aa17.88■□□□□ 0.45
PAX6-250ENST00000639054 PTPN23Q9H3S7 1636 aa17.88■□□□□ 0.45
PAX6-250ENST00000639054 ZNF777Q9ULD5 760 aaPredicted RBP17.87■□□□□ 0.45
PAX6-250ENST00000639054 CFDP1Q9UEE9 299 aaPredicted RBP17.87■□□□□ 0.45
PAX6-250ENST00000639054 MIA2Q96PC5 1412 aa17.84■□□□□ 0.45
PAX6-250ENST00000639054 ITSN2Q9NZM3 1697 aa17.84■□□□□ 0.45
PAX6-250ENST00000639054 DNAJC5Q9H3Z4 198 aa17.83■□□□□ 0.44
PAX6-250ENST00000639054 CDC42BPBQ9Y5S2 1711 aa17.82■□□□□ 0.44
PAX6-250ENST00000639054 TCOF1Q13428 1488 aaKnown RBP17.82■□□□□ 0.44
PAX6-250ENST00000639054 PREX2Q70Z35 1606 aa17.8■□□□□ 0.44
PAX6-250ENST00000639054 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 241.6 ms