RNA–Protein interactions for RNA: ENST00000639054.1

PAX6-250, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 2,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-250ENST00000639054 NISCHQ9Y2I1 1504 aa27.27■■□□□ 1.96
PAX6-250ENST00000639054 CCDC180Q9P1Z9 1646 aa23.83■■□□□ 1.41
PAX6-250ENST00000639054 ABCC9O60706 1549 aa22.92■■□□□ 1.26
PAX6-250ENST00000639054 ZCCHC6Q5VYS8 1495 aaKnown RBP22.84■■□□□ 1.25
PAX6-250ENST00000639054 DCAF8L2P0C7V8 631 aa22.75■■□□□ 1.23
PAX6-250ENST00000639054 DCAF1Q9Y4B6 1507 aa22.46■■□□□ 1.19
PAX6-250ENST00000639054 NACADO15069 1562 aa22.27■■□□□ 1.16
PAX6-250ENST00000639054 MYO15BQ96JP2 1530 aa22.27■■□□□ 1.16
PAX6-250ENST00000639054 SHROOM4Q9ULL8 1493 aa22.2■■□□□ 1.14
PAX6-250ENST00000639054 RB1CC1Q8TDY2 1594 aa22.16■■□□□ 1.14
PAX6-250ENST00000639054 SCRIBQ14160 1630 aa22■■□□□ 1.11
PAX6-250ENST00000639054 UNC13AQ9UPW8 1703 aa21.78■■□□□ 1.08
PAX6-250ENST00000639054 PABPN1Q86U42 306 aaKnown RBP eCLIP21.6■■□□□ 1.05
PAX6-250ENST00000639054 BICRAQ9NZM4 1560 aa21.56■■□□□ 1.04
PAX6-250ENST00000639054 CECR2Q9BXF3 1484 aa21.28■■□□□ 1
PAX6-250ENST00000639054 SUPT5HO00267 1087 aaKnown RBP21.21■□□□□ 0.99
PAX6-250ENST00000639054 MROH2BQ7Z745 1585 aa21.1■□□□□ 0.97
PAX6-250ENST00000639054 RSF1Q96T23 1441 aaPredicted RBP21.08■□□□□ 0.96
PAX6-250ENST00000639054 BAZ1AQ9NRL2 1556 aaPredicted RBP21.04■□□□□ 0.96
PAX6-250ENST00000639054 SMARCA4P51532 1647 aa21.02■□□□□ 0.96
PAX6-250ENST00000639054 WIZO95785 1651 aa20.93■□□□□ 0.94
PAX6-250ENST00000639054 EIF4G1Q04637 1599 aaKnown RBP20.91■□□□□ 0.94
PAX6-250ENST00000639054 ATAD2BQ9ULI0 1458 aa20.75■□□□□ 0.91
PAX6-250ENST00000639054 PEG3Q9GZU2 1588 aa20.72■□□□□ 0.91
PAX6-250ENST00000639054 CC2D2AQ9P2K1 1620 aa20.69■□□□□ 0.9
PAX6-250ENST00000639054 SMARCA2P51531 1590 aa20.68■□□□□ 0.9
PAX6-250ENST00000639054 TOP2AP11388 1531 aaKnown RBP20.63■□□□□ 0.89
PAX6-250ENST00000639054 BAZ1BQ9UIG0 1483 aaKnown RBP20.61■□□□□ 0.89
PAX6-250ENST00000639054 NCAPD3P42695 1498 aa20.58■□□□□ 0.89
PAX6-250ENST00000639054 DNAJC5BQ9UF47 199 aa20.52■□□□□ 0.88
PAX6-250ENST00000639054 HMGXB3Q12766 1538 aa20.5■□□□□ 0.87
PAX6-250ENST00000639054 CCDC88BA6NC98 1476 aa20.47■□□□□ 0.87
PAX6-250ENST00000639054 CHIC1Q5VXU3 224 aa20.12■□□□□ 0.81
PAX6-250ENST00000639054 CFTRP13569 1480 aa20.06■□□□□ 0.8
PAX6-250ENST00000639054 CADPSQ9ULU8 1353 aa20.06■□□□□ 0.8
PAX6-250ENST00000639054 NESP48681 1621 aa20.05■□□□□ 0.8
PAX6-250ENST00000639054 ABCC8Q09428 1581 aa19.99■□□□□ 0.79
PAX6-250ENST00000639054 PRDM2Q13029 1718 aa19.91■□□□□ 0.78
PAX6-250ENST00000639054 LAMC3Q9Y6N6 1575 aa19.91■□□□□ 0.78
PAX6-250ENST00000639054 TRIM41Q8WV44 630 aa19.9■□□□□ 0.78
PAX6-250ENST00000639054 FANCD2Q9BXW9 1451 aa19.85■□□□□ 0.77
PAX6-250ENST00000639054 WRNQ14191 1432 aaPredicted RBP eCLIP19.83■□□□□ 0.76
PAX6-250ENST00000639054 SYNJ1O43426 1573 aa19.79■□□□□ 0.76
PAX6-250ENST00000639054 PDS5BQ9NTI5 1447 aa19.78■□□□□ 0.76
PAX6-250ENST00000639054 KIF21AQ7Z4S6 1674 aa19.77■□□□□ 0.76
PAX6-250ENST00000639054 CUX1P39880 1505 aa19.74■□□□□ 0.75
PAX6-250ENST00000639054 CEP164Q9UPV0 1460 aa19.73■□□□□ 0.75
PAX6-250ENST00000639054 TOP2BQ02880 1626 aa19.68■□□□□ 0.74
PAX6-250ENST00000639054 BIVM-ERCC5R4GMW8 1640 aa19.66■□□□□ 0.74
PAX6-250ENST00000639054 URB2Q14146 1524 aaKnown RBP19.64■□□□□ 0.73
PAX6-250ENST00000639054 ERCC6Q03468 1493 aa19.63■□□□□ 0.73
PAX6-250ENST00000639054 FAM9AQ8IZU1 332 aaPredicted RBP19.62■□□□□ 0.73
PAX6-250ENST00000639054 TOPBP1Q92547 1522 aa19.6■□□□□ 0.73
PAX6-250ENST00000639054 DNMBPQ6XZF7 1577 aa19.59■□□□□ 0.73
PAX6-250ENST00000639054 SOGA1O94964 1423 aa19.56■□□□□ 0.72
PAX6-250ENST00000639054 FGD5Q6ZNL6 1462 aa19.56■□□□□ 0.72
PAX6-250ENST00000639054 MRC2Q9UBG0 1479 aa19.55■□□□□ 0.72
PAX6-250ENST00000639054 RUSC2Q8N2Y8 1516 aa19.53■□□□□ 0.72
PAX6-250ENST00000639054 POLA1P09884 1462 aaPredicted RBP19.5■□□□□ 0.71
PAX6-250ENST00000639054 RAD54L2Q9Y4B4 1467 aa19.48■□□□□ 0.71
PAX6-250ENST00000639054 THOC2Q8NI27 1593 aaKnown RBP19.48■□□□□ 0.71
PAX6-250ENST00000639054 WDR62O43379 1518 aa19.45■□□□□ 0.7
PAX6-250ENST00000639054 EHMT2Q96KQ7 1210 aa19.42■□□□□ 0.7
PAX6-250ENST00000639054 LOC105371045A0A1W2PR82 267 aa19.42■□□□□ 0.7
PAX6-250ENST00000639054 CUX2O14529 1486 aa19.38■□□□□ 0.69
PAX6-250ENST00000639054 CSRNP3Q8WYN3 585 aa19.35■□□□□ 0.69
PAX6-250ENST00000639054 ABCA10Q8WWZ4 1543 aa19.34■□□□□ 0.69
PAX6-250ENST00000639054 KIF27Q86VH2 1401 aa19.33■□□□□ 0.69
PAX6-250ENST00000639054 TARBP1Q13395 1621 aaKnown RBP19.33■□□□□ 0.69
PAX6-250ENST00000639054 EEA1Q15075 1411 aa19.33■□□□□ 0.68
PAX6-250ENST00000639054 TDRD9Q8NDG6 1382 aaKnown RBP19.32■□□□□ 0.68
PAX6-250ENST00000639054 WDR97A6NE52 1622 aa19.3■□□□□ 0.68
PAX6-250ENST00000639054 IFT140Q96RY7 1462 aa19.26■□□□□ 0.67
PAX6-250ENST00000639054 ZNF608Q9ULD9 1512 aaPredicted RBP19.25■□□□□ 0.67
PAX6-250ENST00000639054 AQRO60306 1485 aaKnown RBP eCLIP19.24■□□□□ 0.67
PAX6-250ENST00000639054 IGF1RP08069 1367 aa19.23■□□□□ 0.67
PAX6-250ENST00000639054 ABCA5Q8WWZ7 1642 aa19.21■□□□□ 0.67
PAX6-250ENST00000639054 GAPVD1Q14C86 1478 aa19.2■□□□□ 0.66
PAX6-250ENST00000639054 RAPGEF2Q9Y4G8 1499 aa19.15■□□□□ 0.66
PAX6-250ENST00000639054 PRXQ9BXM0 1461 aa19.15■□□□□ 0.66
PAX6-250ENST00000639054 EIF4G3O43432 1585 aaKnown RBP19.13■□□□□ 0.65
PAX6-250ENST00000639054 KIF21BO75037 1637 aa19.13■□□□□ 0.65
PAX6-250ENST00000639054 CARMIL1Q5VZK9 1371 aa19.12■□□□□ 0.65
PAX6-250ENST00000639054 PBRM1Q86U86 1689 aa19.11■□□□□ 0.65
PAX6-250ENST00000639054 UBTFP17480 764 aaKnown RBP19.11■□□□□ 0.65
PAX6-250ENST00000639054 GOLGA3Q08378 1498 aa19.1■□□□□ 0.65
PAX6-250ENST00000639054 ERICH3Q5RHP9 1530 aa19.09■□□□□ 0.65
PAX6-250ENST00000639054 GRIN2BQ13224 1484 aa19.07■□□□□ 0.64
PAX6-250ENST00000639054 CUL7Q14999 1698 aa19.04■□□□□ 0.64
PAX6-250ENST00000639054 SNAPC4Q5SXM2 1469 aa19.02■□□□□ 0.64
PAX6-250ENST00000639054 TNIKQ9UKE5 1360 aa19■□□□□ 0.63
PAX6-250ENST00000639054 ADAMTS12P58397 1594 aa18.98■□□□□ 0.63
PAX6-250ENST00000639054 RANGAP1P46060 587 aaPredicted RBP18.98■□□□□ 0.63
PAX6-250ENST00000639054 FHAD1B1AJZ9 1412 aa18.96■□□□□ 0.63
PAX6-250ENST00000639054 FBLN2P98095 1184 aa18.93■□□□□ 0.62
PAX6-250ENST00000639054 MAGI1Q96QZ7 1491 aaPredicted RBP18.92■□□□□ 0.62
PAX6-250ENST00000639054 CEP162Q5TB80 1403 aa18.91■□□□□ 0.62
PAX6-250ENST00000639054 CHMP7Q8WUX9 453 aaPredicted RBP18.89■□□□□ 0.61
PAX6-250ENST00000639054 SYNJ2O15056 1496 aa18.87■□□□□ 0.61
PAX6-250ENST00000639054 GRIN2AQ12879 1464 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms