RNA–Protein interactions for RNA: ENST00000639038.1

NECAP1-214, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,423 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-214ENST00000639038 CUX2O14529 1486 aa12.85□□□□□ -0.35
NECAP1-214ENST00000639038 PLCB2Q00722 1185 aa12.85□□□□□ -0.35
NECAP1-214ENST00000639038 UBE2Q2Q8WVN8 375 aa12.85□□□□□ -0.35
NECAP1-214ENST00000639038 TARBP1Q13395 1621 aaKnown RBP12.84□□□□□ -0.35
NECAP1-214ENST00000639038 RUSC2Q8N2Y8 1516 aa12.84□□□□□ -0.35
NECAP1-214ENST00000639038 WDR97A6NE52 1622 aa12.83□□□□□ -0.35
NECAP1-214ENST00000639038 IFT140Q96RY7 1462 aa12.83□□□□□ -0.36
NECAP1-214ENST00000639038 KIF27Q86VH2 1401 aa12.82□□□□□ -0.36
NECAP1-214ENST00000639038 TMEM132AQ24JP5 1023 aa12.79□□□□□ -0.36
NECAP1-214ENST00000639038 LOC105371045A0A1W2PR82 267 aa12.77□□□□□ -0.37
NECAP1-214ENST00000639038 ABCA5Q8WWZ7 1642 aa12.76□□□□□ -0.37
NECAP1-214ENST00000639038 TDRD9Q8NDG6 1382 aaKnown RBP12.74□□□□□ -0.37
NECAP1-214ENST00000639038 IGF1RP08069 1367 aa12.74□□□□□ -0.37
NECAP1-214ENST00000639038 GAPVD1Q14C86 1478 aa12.73□□□□□ -0.37
NECAP1-214ENST00000639038 HAP1P54257 671 aaPredicted RBP12.73□□□□□ -0.37
NECAP1-214ENST00000639038 TRIM26Q12899 539 aaPredicted RBP12.72□□□□□ -0.37
NECAP1-214ENST00000639038 ZNF608Q9ULD9 1512 aaPredicted RBP12.72□□□□□ -0.37
NECAP1-214ENST00000639038 ERICH3Q5RHP9 1530 aa12.71□□□□□ -0.38
NECAP1-214ENST00000639038 AQRO60306 1485 aaKnown RBP eCLIP12.7□□□□□ -0.386e-7■■■■■ 30.6
NECAP1-214ENST00000639038 KIF21BO75037 1637 aa12.7□□□□□ -0.38
NECAP1-214ENST00000639038 PRXQ9BXM0 1461 aa12.7□□□□□ -0.38
NECAP1-214ENST00000639038 EIF4G3O43432 1585 aaKnown RBP12.68□□□□□ -0.38
NECAP1-214ENST00000639038 PBRM1Q86U86 1689 aa12.68□□□□□ -0.38
NECAP1-214ENST00000639038 GRIN2BQ13224 1484 aa12.68□□□□□ -0.38
NECAP1-214ENST00000639038 CUL7Q14999 1698 aa12.67□□□□□ -0.38
NECAP1-214ENST00000639038 CARMIL1Q5VZK9 1371 aa12.66□□□□□ -0.38
NECAP1-214ENST00000639038 HRCP23327 699 aa12.66□□□□□ -0.38
NECAP1-214ENST00000639038 PDE4CQ08493 712 aa12.66□□□□□ -0.38
NECAP1-214ENST00000639038 GOLGA3Q08378 1498 aa12.65□□□□□ -0.38
NECAP1-214ENST00000639038 CHMP4AQ9BY43 222 aa12.64□□□□□ -0.39
NECAP1-214ENST00000639038 RAPGEF2Q9Y4G8 1499 aa12.63□□□□□ -0.39
NECAP1-214ENST00000639038 FHAD1B1AJZ9 1412 aa12.61□□□□□ -0.39
NECAP1-214ENST00000639038 ADAMTS12P58397 1594 aa12.61□□□□□ -0.39
NECAP1-214ENST00000639038 MAGI1Q96QZ7 1491 aaPredicted RBP12.6□□□□□ -0.39
NECAP1-214ENST00000639038 SNAPC4Q5SXM2 1469 aa12.59□□□□□ -0.39
NECAP1-214ENST00000639038 TNIKQ9UKE5 1360 aa12.59□□□□□ -0.39
NECAP1-214ENST00000639038 NEFLP07196 543 aa12.58□□□□□ -0.4
NECAP1-214ENST00000639038 PKNOX2Q96KN3 472 aa12.57□□□□□ -0.4
NECAP1-214ENST00000639038 UBTFP17480 764 aaKnown RBP12.56□□□□□ -0.4
NECAP1-214ENST00000639038 SYNJ2O15056 1496 aa12.55□□□□□ -0.4
NECAP1-214ENST00000639038 SAMD1Q6SPF0 538 aaPredicted RBP12.53□□□□□ -0.4
NECAP1-214ENST00000639038 GRIN2AQ12879 1464 aa12.51□□□□□ -0.41
NECAP1-214ENST00000639038 SLC4A1APQ9BWU0 796 aaKnown RBP12.51□□□□□ -0.41
NECAP1-214ENST00000639038 TAF7LQ5H9L4 462 aa12.5□□□□□ -0.41
NECAP1-214ENST00000639038 CHMP7Q8WUX9 453 aaPredicted RBP12.49□□□□□ -0.41
NECAP1-214ENST00000639038 CTTNBP2Q8WZ74 1663 aa12.49□□□□□ -0.41
NECAP1-214ENST00000639038 BRD2P25440 801 aaKnown RBP12.48□□□□□ -0.41
NECAP1-214ENST00000639038 CNKSR2Q8WXI2 1034 aa12.48□□□□□ -0.41
NECAP1-214ENST00000639038 CEP162Q5TB80 1403 aa12.47□□□□□ -0.41
NECAP1-214ENST00000639038 DHX37Q8IY37 1157 aaKnown RBP12.46□□□□□ -0.41
NECAP1-214ENST00000639038 NUP160Q12769 1436 aa12.45□□□□□ -0.42
NECAP1-214ENST00000639038 CHD1O14646 1710 aa12.45□□□□□ -0.42
NECAP1-214ENST00000639038 FBLN2P98095 1184 aa12.45□□□□□ -0.42
NECAP1-214ENST00000639038 CENPBP07199 599 aaPredicted RBP12.44□□□□□ -0.42
NECAP1-214ENST00000639038 CDK11BP21127 795 aaKnown RBP12.44□□□□□ -0.42
NECAP1-214ENST00000639038 CDK11AQ9UQ88 783 aaPredicted RBP12.44□□□□□ -0.42
NECAP1-214ENST00000639038 KIAA0586Q9BVV6 1533 aa12.44□□□□□ -0.42
NECAP1-214ENST00000639038 CEP170Q5SW79 1584 aa12.43□□□□□ -0.42
NECAP1-214ENST00000639038 CLIP1P30622 1438 aa12.43□□□□□ -0.42
NECAP1-214ENST00000639038 IQGAP2Q13576 1575 aa12.41□□□□□ -0.42
NECAP1-214ENST00000639038 VSIG10Q8N0Z9 540 aa12.4□□□□□ -0.42
NECAP1-214ENST00000639038 EFCAB5A4FU69 1503 aa12.38□□□□□ -0.43
NECAP1-214ENST00000639038 UGGT2Q9NYU1 1516 aa12.38□□□□□ -0.43
NECAP1-214ENST00000639038 ARHGAP35Q9NRY4 1499 aa12.38□□□□□ -0.43
NECAP1-214ENST00000639038 SAMD9Q5K651 1589 aa12.36□□□□□ -0.43
NECAP1-214ENST00000639038 BCL11BQ9C0K0 894 aaPredicted RBP12.35□□□□□ -0.43
NECAP1-214ENST00000639038 ARAP1Q96P48 1450 aa12.34□□□□□ -0.43
NECAP1-214ENST00000639038 CLASP1Q7Z460 1538 aa12.34□□□□□ -0.43
NECAP1-214ENST00000639038 SCAF1Q9H7N4 1312 aaKnown RBP12.33□□□□□ -0.43
NECAP1-214ENST00000639038 JPH4Q96JJ6 628 aa12.32□□□□□ -0.44
NECAP1-214ENST00000639038 SHROOM2Q13796 1616 aa12.31□□□□□ -0.44
NECAP1-214ENST00000639038 DISP1Q96F81 1524 aa12.3□□□□□ -0.44
NECAP1-214ENST00000639038 FGD1P98174 961 aa12.3□□□□□ -0.44
NECAP1-214ENST00000639038 VPS8Q8N3P4 1428 aa12.3□□□□□ -0.44
NECAP1-214ENST00000639038 OSCARQ8IYS5 282 aa12.29□□□□□ -0.44
NECAP1-214ENST00000639038 KIAA0556O60303 1618 aa12.29□□□□□ -0.44
NECAP1-214ENST00000639038 KDM2AQ9Y2K7 1162 aa12.29□□□□□ -0.44
NECAP1-214ENST00000639038 FHOD3Q2V2M9 1422 aa12.28□□□□□ -0.44
NECAP1-214ENST00000639038 CARMIL2Q6F5E8 1435 aa12.27□□□□□ -0.44
NECAP1-214ENST00000639038 P3H3Q8IVL6 736 aa12.27□□□□□ -0.44
NECAP1-214ENST00000639038 ANO8Q9HCE9 1232 aaPredicted RBP12.27□□□□□ -0.44
NECAP1-214ENST00000639038 PPP6R1Q9UPN7 881 aa12.27□□□□□ -0.44
NECAP1-214ENST00000639038 PRG4Q92954 1404 aaPredicted RBP12.25□□□□□ -0.45
NECAP1-214ENST00000639038 IGSF3O75054 1194 aa12.25□□□□□ -0.45
NECAP1-214ENST00000639038 FMN1Q68DA7 1419 aa12.25□□□□□ -0.45
NECAP1-214ENST00000639038 HSP90B1P14625 803 aaKnown RBP12.25□□□□□ -0.45
NECAP1-214ENST00000639038 CASKIN1Q8WXD9 1431 aa12.21□□□□□ -0.45
NECAP1-214ENST00000639038 FYCO1Q9BQS8 1478 aa12.2□□□□□ -0.46
NECAP1-214ENST00000639038 PCF11O94913 1555 aaKnown RBP12.19□□□□□ -0.46
NECAP1-214ENST00000639038 ERCC6L2Q5T890 1561 aa12.19□□□□□ -0.46
NECAP1-214ENST00000639038 HMGB1P09429 215 aaKnown RBP12.17□□□□□ -0.46
NECAP1-214ENST00000639038 PTPRGP23470 1445 aa12.17□□□□□ -0.46
NECAP1-214ENST00000639038 MAP3K1Q13233 1512 aa12.16□□□□□ -0.46
NECAP1-214ENST00000639038 RAPGEF6Q8TEU7 1601 aa12.15□□□□□ -0.46
NECAP1-214ENST00000639038 ABCA8O94911 1581 aa12.14□□□□□ -0.47
NECAP1-214ENST00000639038 HECW1Q76N89 1606 aa12.14□□□□□ -0.47
NECAP1-214ENST00000639038 ADRA2BP18089 450 aa12.13□□□□□ -0.47
NECAP1-214ENST00000639038 MSH5O43196 834 aa12.12□□□□□ -0.47
NECAP1-214ENST00000639038 TIAM1Q13009 1591 aa12.12□□□□□ -0.47
NECAP1-214ENST00000639038 PLB1Q6P1J6 1458 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms