RNA–Protein interactions for RNA: ENST00000639038.1

NECAP1-214, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,423 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-214ENST00000639038 NISCHQ9Y2I1 1504 aa18.1■□□□□ 0.49
NECAP1-214ENST00000639038 SLC24A1O60721 1099 aa16.31■□□□□ 0.2
NECAP1-214ENST00000639038 AEBP2Q6ZN18 517 aaPredicted RBP16.24■□□□□ 0.19
NECAP1-214ENST00000639038 CCDC180Q9P1Z9 1646 aa15.92■□□□□ 0.14
NECAP1-214ENST00000639038 CHIC1Q5VXU3 224 aa15.74■□□□□ 0.11
NECAP1-214ENST00000639038 MYT1Q01538 1121 aa15.27■□□□□ 0.03
NECAP1-214ENST00000639038 ZCCHC6Q5VYS8 1495 aaKnown RBP15.17■□□□□ 0.02
NECAP1-214ENST00000639038 ABCC9O60706 1549 aa15.14■□□□□ 0.01
NECAP1-214ENST00000639038 TTBK1Q5TCY1 1321 aaPredicted RBP15.13■□□□□ 0.01
NECAP1-214ENST00000639038 DAXXQ9UER7 740 aaPredicted RBP15.07■□□□□ 0
NECAP1-214ENST00000639038 PELP1Q8IZL8 1130 aaKnown RBP15.05■□□□□ -0
NECAP1-214ENST00000639038 DCAF1Q9Y4B6 1507 aa15.02□□□□□ -0.01
NECAP1-214ENST00000639038 MYO15BQ96JP2 1530 aa14.93□□□□□ -0.02
NECAP1-214ENST00000639038 DCAF8L2P0C7V8 631 aa14.91□□□□□ -0.02
NECAP1-214ENST00000639038 NACADO15069 1562 aa14.86□□□□□ -0.03
NECAP1-214ENST00000639038 PRKCSHP14314 528 aaPredicted RBP14.81□□□□□ -0.04
NECAP1-214ENST00000639038 APLP2Q06481 763 aa14.79□□□□□ -0.04
NECAP1-214ENST00000639038 RB1CC1Q8TDY2 1594 aa14.77□□□□□ -0.05
NECAP1-214ENST00000639038 ERICH6Q7L0X2 663 aa14.68□□□□□ -0.06
NECAP1-214ENST00000639038 EHMT2Q96KQ7 1210 aa14.53□□□□□ -0.08
NECAP1-214ENST00000639038 SCRIBQ14160 1630 aa14.53□□□□□ -0.08
NECAP1-214ENST00000639038 SHROOM4Q9ULL8 1493 aa14.52□□□□□ -0.09
NECAP1-214ENST00000639038 NCBP3Q53F19 620 aaKnown RBP14.5□□□□□ -0.09
NECAP1-214ENST00000639038 UNC13AQ9UPW8 1703 aa14.44□□□□□ -0.1
NECAP1-214ENST00000639038 PLPPR3Q6T4P5 718 aa14.4□□□□□ -0.1
NECAP1-214ENST00000639038 RTN4Q9NQC3 1192 aaKnown RBP14.35□□□□□ -0.11
NECAP1-214ENST00000639038 BICRAQ9NZM4 1560 aa14.32□□□□□ -0.12
NECAP1-214ENST00000639038 PABPN1Q86U42 306 aaKnown RBP eCLIP14.22□□□□□ -0.13
NECAP1-214ENST00000639038 CECR2Q9BXF3 1484 aa14.05□□□□□ -0.16
NECAP1-214ENST00000639038 ARXQ96QS3 562 aa14.04□□□□□ -0.16
NECAP1-214ENST00000639038 BAZ1AQ9NRL2 1556 aaPredicted RBP13.99□□□□□ -0.17
NECAP1-214ENST00000639038 SENP3Q9H4L4 574 aaPredicted RBP13.98□□□□□ -0.17
NECAP1-214ENST00000639038 AMER1Q5JTC6 1135 aaPredicted RBP13.95□□□□□ -0.18
NECAP1-214ENST00000639038 MROH2BQ7Z745 1585 aa13.95□□□□□ -0.18
NECAP1-214ENST00000639038 SMARCA4P51532 1647 aa13.95□□□□□ -0.18
NECAP1-214ENST00000639038 RSF1Q96T23 1441 aaPredicted RBP13.95□□□□□ -0.18
NECAP1-214ENST00000639038 EIF4G1Q04637 1599 aaKnown RBP13.89□□□□□ -0.19
NECAP1-214ENST00000639038 EIF5BO60841 1220 aaKnown RBP13.88□□□□□ -0.19
NECAP1-214ENST00000639038 SUPT5HO00267 1087 aaKnown RBP13.88□□□□□ -0.19
NECAP1-214ENST00000639038 TIMELESSQ9UNS1 1208 aa13.84□□□□□ -0.19
NECAP1-214ENST00000639038 PEG3Q9GZU2 1588 aa13.83□□□□□ -0.2
NECAP1-214ENST00000639038 WIZO95785 1651 aa13.82□□□□□ -0.2
NECAP1-214ENST00000639038 RANGAP1P46060 587 aaPredicted RBP13.79□□□□□ -0.2
NECAP1-214ENST00000639038 SMARCA2P51531 1590 aa13.78□□□□□ -0.2
NECAP1-214ENST00000639038 ATAD2BQ9ULI0 1458 aa13.78□□□□□ -0.2
NECAP1-214ENST00000639038 PHF23Q9BUL5 403 aaPredicted RBP13.74□□□□□ -0.21
NECAP1-214ENST00000639038 CC2D2AQ9P2K1 1620 aa13.73□□□□□ -0.21
NECAP1-214ENST00000639038 NCAPD3P42695 1498 aa13.72□□□□□ -0.21
NECAP1-214ENST00000639038 TOP2AP11388 1531 aaKnown RBP13.71□□□□□ -0.22
NECAP1-214ENST00000639038 HMGXB3Q12766 1538 aa13.68□□□□□ -0.22
NECAP1-214ENST00000639038 BAZ1BQ9UIG0 1483 aaKnown RBP13.67□□□□□ -0.22
NECAP1-214ENST00000639038 KCNA4P22459 653 aa13.63□□□□□ -0.23
NECAP1-214ENST00000639038 KLHL34Q8N239 644 aa13.6□□□□□ -0.23
NECAP1-214ENST00000639038 TULP1O00294 542 aaPredicted RBP13.59□□□□□ -0.23
NECAP1-214ENST00000639038 HOMEZQ8IX15 550 aa13.57□□□□□ -0.24
NECAP1-214ENST00000639038 DNAJC5BQ9UF47 199 aa13.54□□□□□ -0.24
NECAP1-214ENST00000639038 CCDC88BA6NC98 1476 aa13.54□□□□□ -0.24
NECAP1-214ENST00000639038 BCL11AQ9H165 835 aa13.49□□□□□ -0.25
NECAP1-214ENST00000639038 TAOK2Q9UL54 1235 aa13.44□□□□□ -0.26
NECAP1-214ENST00000639038 PLEKHG5O94827 1062 aa13.43□□□□□ -0.26
NECAP1-214ENST00000639038 CSRNP3Q8WYN3 585 aa13.4□□□□□ -0.26
NECAP1-214ENST00000639038 PODXL2Q9NZ53 605 aa13.37□□□□□ -0.27
NECAP1-214ENST00000639038 CFTRP13569 1480 aa13.34□□□□□ -0.27
NECAP1-214ENST00000639038 CADPSQ9ULU8 1353 aa13.33□□□□□ -0.28
NECAP1-214ENST00000639038 PRDM2Q13029 1718 aa13.28□□□□□ -0.28
NECAP1-214ENST00000639038 LAMC3Q9Y6N6 1575 aa13.28□□□□□ -0.28
NECAP1-214ENST00000639038 NESP48681 1621 aa13.23□□□□□ -0.29
NECAP1-214ENST00000639038 TPRNQ4KMQ1 711 aa13.21□□□□□ -0.3
NECAP1-214ENST00000639038 FAM9AQ8IZU1 332 aaPredicted RBP13.2□□□□□ -0.3
NECAP1-214ENST00000639038 BCANQ96GW7 911 aa13.19□□□□□ -0.3
NECAP1-214ENST00000639038 PDS5BQ9NTI5 1447 aa13.17□□□□□ -0.3
NECAP1-214ENST00000639038 FANCD2Q9BXW9 1451 aa13.17□□□□□ -0.3
NECAP1-214ENST00000639038 ABCC8Q09428 1581 aa13.16□□□□□ -0.3
NECAP1-214ENST00000639038 WRNQ14191 1432 aaPredicted RBP eCLIP13.13□□□□□ -0.31
NECAP1-214ENST00000639038 NPM2Q86SE8 214 aaKnown RBP13.11□□□□□ -0.31
NECAP1-214ENST00000639038 CEP164Q9UPV0 1460 aa13.11□□□□□ -0.31
NECAP1-214ENST00000639038 TRIM41Q8WV44 630 aa13.1□□□□□ -0.31
NECAP1-214ENST00000639038 GTF3C3Q9Y5Q9 886 aa13.09□□□□□ -0.31
NECAP1-214ENST00000639038 KIF21AQ7Z4S6 1674 aa13.09□□□□□ -0.31
NECAP1-214ENST00000639038 SYNJ1O43426 1573 aa13.08□□□□□ -0.32
NECAP1-214ENST00000639038 CUX1P39880 1505 aa13.07□□□□□ -0.32
NECAP1-214ENST00000639038 TOP2BQ02880 1626 aa13.06□□□□□ -0.32
NECAP1-214ENST00000639038 BIVM-ERCC5R4GMW8 1640 aa13.06□□□□□ -0.32
NECAP1-214ENST00000639038 DNMBPQ6XZF7 1577 aa13.03□□□□□ -0.32
NECAP1-214ENST00000639038 URB2Q14146 1524 aaKnown RBP13.02□□□□□ -0.33
NECAP1-214ENST00000639038 ERCC6Q03468 1493 aa13.01□□□□□ -0.33
NECAP1-214ENST00000639038 TOPBP1Q92547 1522 aa13.01□□□□□ -0.33
NECAP1-214ENST00000639038 MRC2Q9UBG0 1479 aa13.01□□□□□ -0.33
NECAP1-214ENST00000639038 WDR62O43379 1518 aa12.95□□□□□ -0.34
NECAP1-214ENST00000639038 THOC2Q8NI27 1593 aaKnown RBP12.95□□□□□ -0.34
NECAP1-214ENST00000639038 FGD5Q6ZNL6 1462 aa12.95□□□□□ -0.34
NECAP1-214ENST00000639038 C14orf37Q86TY3 774 aa12.94□□□□□ -0.34
NECAP1-214ENST00000639038 POLA1P09884 1462 aaPredicted RBP12.92□□□□□ -0.34
NECAP1-214ENST00000639038 FOXD1Q16676 465 aa12.89□□□□□ -0.35
NECAP1-214ENST00000639038 SOGA1O94964 1423 aa12.88□□□□□ -0.35
NECAP1-214ENST00000639038 PDIA4P13667 645 aaKnown RBP12.88□□□□□ -0.35
NECAP1-214ENST00000639038 FBXO3Q9UK99 471 aa12.88□□□□□ -0.35
NECAP1-214ENST00000639038 EEA1Q15075 1411 aa12.87□□□□□ -0.35
NECAP1-214ENST00000639038 ABCA10Q8WWZ4 1543 aa12.86□□□□□ -0.35
NECAP1-214ENST00000639038 RAD54L2Q9Y4B4 1467 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms