RNA–Protein interactions for RNA: ENST00000638475.1

HNRNPU-214, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-214ENST00000638475 CHMP7Q8WUX9 453 aaPredicted RBP23.56■■□□□ 1.36
HNRNPU-214ENST00000638475 ADAMTS12P58397 1594 aa23.53■■□□□ 1.36
HNRNPU-214ENST00000638475 MAGI1Q96QZ7 1491 aaPredicted RBP23.53■■□□□ 1.36
HNRNPU-214ENST00000638475 CEP162Q5TB80 1403 aa23.5■■□□□ 1.35
HNRNPU-214ENST00000638475 SYNJ2O15056 1496 aa23.46■■□□□ 1.35
HNRNPU-214ENST00000638475 GRIN2AQ12879 1464 aa23.43■■□□□ 1.34
HNRNPU-214ENST00000638475 CLIP1P30622 1438 aa23.41■■□□□ 1.34
HNRNPU-214ENST00000638475 P3H3Q8IVL6 736 aa23.32■■□□□ 1.32
HNRNPU-214ENST00000638475 CTTNBP2Q8WZ74 1663 aa23.31■■□□□ 1.32
HNRNPU-214ENST00000638475 TTBK1Q5TCY1 1321 aaPredicted RBP23.31■■□□□ 1.32
HNRNPU-214ENST00000638475 CEP170Q5SW79 1584 aa23.27■■□□□ 1.32
HNRNPU-214ENST00000638475 KIAA0586Q9BVV6 1533 aa23.27■■□□□ 1.32
HNRNPU-214ENST00000638475 CHD1O14646 1710 aa23.27■■□□□ 1.31
HNRNPU-214ENST00000638475 ACIN1Q9UKV3 1341 aaKnown RBP23.26■■□□□ 1.31
HNRNPU-214ENST00000638475 NUP160Q12769 1436 aa23.26■■□□□ 1.31
HNRNPU-214ENST00000638475 ARHGAP35Q9NRY4 1499 aa23.25■■□□□ 1.31
HNRNPU-214ENST00000638475 IQGAP2Q13576 1575 aa23.23■■□□□ 1.31
HNRNPU-214ENST00000638475 NEUROD1Q13562 356 aa23.22■■□□□ 1.31
HNRNPU-214ENST00000638475 ARAP1Q96P48 1450 aa23.2■■□□□ 1.31
HNRNPU-214ENST00000638475 JPH4Q96JJ6 628 aa23.2■■□□□ 1.3
HNRNPU-214ENST00000638475 GTF3C3Q9Y5Q9 886 aa23.19■■□□□ 1.3
HNRNPU-214ENST00000638475 FHOD3Q2V2M9 1422 aa23.15■■□□□ 1.3
HNRNPU-214ENST00000638475 VPS8Q8N3P4 1428 aa23.12■■□□□ 1.29
HNRNPU-214ENST00000638475 EFCAB5A4FU69 1503 aa23.11■■□□□ 1.29
HNRNPU-214ENST00000638475 UGGT2Q9NYU1 1516 aa23.1■■□□□ 1.29
HNRNPU-214ENST00000638475 OSCARQ8IYS5 282 aa23.1■■□□□ 1.29
HNRNPU-214ENST00000638475 BCL11AQ9H165 835 aa23.1■■□□□ 1.29
HNRNPU-214ENST00000638475 SAMD9Q5K651 1589 aa23.08■■□□□ 1.28
HNRNPU-214ENST00000638475 DISP1Q96F81 1524 aa23.06■■□□□ 1.28
HNRNPU-214ENST00000638475 ATP1B4Q9UN42 357 aaPredicted RBP23.05■■□□□ 1.28
HNRNPU-214ENST00000638475 PRG4Q92954 1404 aaPredicted RBP23.02■■□□□ 1.28
HNRNPU-214ENST00000638475 CARMIL2Q6F5E8 1435 aa23.01■■□□□ 1.27
HNRNPU-214ENST00000638475 ZEB1P37275 1124 aaPredicted RBP23■■□□□ 1.27
HNRNPU-214ENST00000638475 APLP2Q06481 763 aa23■■□□□ 1.27
HNRNPU-214ENST00000638475 CLASP1Q7Z460 1538 aa22.99■■□□□ 1.27
HNRNPU-214ENST00000638475 KIAA0556O60303 1618 aa22.98■■□□□ 1.27
HNRNPU-214ENST00000638475 FMN1Q68DA7 1419 aa22.98■■□□□ 1.27
HNRNPU-214ENST00000638475 TRIM26Q12899 539 aaPredicted RBP22.95■■□□□ 1.26
HNRNPU-214ENST00000638475 SHROOM2Q13796 1616 aa22.92■■□□□ 1.26
HNRNPU-214ENST00000638475 PRKCSHP14314 528 aaPredicted RBP22.91■■□□□ 1.26
HNRNPU-214ENST00000638475 ERCC6L2Q5T890 1561 aa22.9■■□□□ 1.26
HNRNPU-214ENST00000638475 CASKIN1Q8WXD9 1431 aa22.88■■□□□ 1.25
HNRNPU-214ENST00000638475 CENPBP07199 599 aaPredicted RBP22.88■■□□□ 1.25
HNRNPU-214ENST00000638475 PCF11O94913 1555 aaKnown RBP22.88■■□□□ 1.25
HNRNPU-214ENST00000638475 ARID3CA6NKF2 412 aa22.87■■□□□ 1.25
HNRNPU-214ENST00000638475 PTPRGP23470 1445 aa22.86■■□□□ 1.25
HNRNPU-214ENST00000638475 KANK4Q5T7N3 995 aaPredicted RBP22.85■■□□□ 1.25
HNRNPU-214ENST00000638475 FYCO1Q9BQS8 1478 aa22.83■■□□□ 1.25
HNRNPU-214ENST00000638475 PLB1Q6P1J6 1458 aa22.82■■□□□ 1.24
HNRNPU-214ENST00000638475 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.76■■□□□ 1.23
HNRNPU-214ENST00000638475 HNRNPUL2Q1KMD3 747 aaKnown RBP22.76■■□□□ 1.23
HNRNPU-214ENST00000638475 RAPGEF6Q8TEU7 1601 aa22.73■■□□□ 1.23
HNRNPU-214ENST00000638475 TIAM1Q13009 1591 aa22.73■■□□□ 1.23
HNRNPU-214ENST00000638475 NUP153P49790 1475 aaKnown RBP22.72■■□□□ 1.23
HNRNPU-214ENST00000638475 HECW1Q76N89 1606 aa22.71■■□□□ 1.23
HNRNPU-214ENST00000638475 EPRSP07814 1512 aaKnown RBP22.71■■□□□ 1.23
HNRNPU-214ENST00000638475 MAP3K1Q13233 1512 aa22.7■■□□□ 1.22
HNRNPU-214ENST00000638475 LRRIQ1Q96JM4 1722 aa22.7■■□□□ 1.22
HNRNPU-214ENST00000638475 UACAQ9BZF9 1416 aa22.68■■□□□ 1.22
HNRNPU-214ENST00000638475 CDK13Q14004 1512 aaKnown RBP22.68■■□□□ 1.22
HNRNPU-214ENST00000638475 ABCA8O94911 1581 aa22.68■■□□□ 1.22
HNRNPU-214ENST00000638475 LRRC9Q6ZRR7 1453 aa22.67■■□□□ 1.22
HNRNPU-214ENST00000638475 CCDC18Q5T9S5 1454 aa22.65■■□□□ 1.22
HNRNPU-214ENST00000638475 MTUS2Q5JR59 1369 aa22.65■■□□□ 1.22
HNRNPU-214ENST00000638475 CFAP43Q8NDM7 1665 aa22.63■■□□□ 1.21
HNRNPU-214ENST00000638475 ARHGEF11O15085 1522 aa22.61■■□□□ 1.21
HNRNPU-214ENST00000638475 ATP10BO94823 1461 aa22.6■■□□□ 1.21
HNRNPU-214ENST00000638475 CDK11AQ9UQ88 783 aaPredicted RBP22.6■■□□□ 1.21
HNRNPU-214ENST00000638475 CYB5RLQ6IPT4 315 aa22.57■■□□□ 1.2
HNRNPU-214ENST00000638475 MAGI3Q5TCQ9 1506 aa22.57■■□□□ 1.2
HNRNPU-214ENST00000638475 ABCC2Q92887 1545 aa22.57■■□□□ 1.2
HNRNPU-214ENST00000638475 PLEKHD1A6NEE1 506 aa22.55■■□□□ 1.2
HNRNPU-214ENST00000638475 UHRF1BP1LA0JNW5 1464 aa22.52■■□□□ 1.2
HNRNPU-214ENST00000638475 RIMBP3CA6NJZ7 1639 aa22.5■■□□□ 1.19
HNRNPU-214ENST00000638475 RIMBP3BA6NNM3 1639 aa22.5■■□□□ 1.19
HNRNPU-214ENST00000638475 RIMBP3Q9UFD9 1639 aa22.5■■□□□ 1.19
HNRNPU-214ENST00000638475 PHLDB1Q86UU1 1377 aa22.49■■□□□ 1.19
HNRNPU-214ENST00000638475 EHBP1L1Q8N3D4 1523 aa22.48■■□□□ 1.19
HNRNPU-214ENST00000638475 ADCY10Q96PN6 1610 aa22.48■■□□□ 1.19
HNRNPU-214ENST00000638475 NCOA2Q15596 1464 aa22.46■■□□□ 1.19
HNRNPU-214ENST00000638475 TROQ12816 1431 aaPredicted RBP22.46■■□□□ 1.19
HNRNPU-214ENST00000638475 KDM5BQ9UGL1 1544 aa22.46■■□□□ 1.19
HNRNPU-214ENST00000638475 NPM1P06748 294 aaKnown RBP eCLIP22.45■■□□□ 1.18
HNRNPU-214ENST00000638475 KCNH8Q96L42 1107 aa22.44■■□□□ 1.18
HNRNPU-214ENST00000638475 ANP32EQ9BTT0 268 aa22.44■■□□□ 1.18
HNRNPU-214ENST00000638475 SUPT6HQ7KZ85 1726 aaKnown RBP22.42■■□□□ 1.18
HNRNPU-214ENST00000638475 ZCCHC11Q5TAX3 1644 aaKnown RBP22.41■■□□□ 1.18
HNRNPU-214ENST00000638475 DIEXFQ68CQ4 756 aaKnown RBP22.39■■□□□ 1.17
HNRNPU-214ENST00000638475 FAM50AQ14320 339 aaKnown RBP22.37■■□□□ 1.17
HNRNPU-214ENST00000638475 CCNB3Q8WWL7 1395 aa22.37■■□□□ 1.17
HNRNPU-214ENST00000638475 RRBP1Q9P2E9 1410 aaKnown RBP22.36■■□□□ 1.17
HNRNPU-214ENST00000638475 KIF14Q15058 1648 aa22.35■■□□□ 1.17
HNRNPU-214ENST00000638475 MYOM3Q5VTT5 1437 aa22.34■■□□□ 1.17
HNRNPU-214ENST00000638475 ITGAEP38570 1179 aa22.34■■□□□ 1.17
HNRNPU-214ENST00000638475 FGD6Q6ZV73 1430 aa22.31■■□□□ 1.16
HNRNPU-214ENST00000638475 ASXL2Q76L83 1435 aa22.3■■□□□ 1.16
HNRNPU-214ENST00000638475 CFDP1Q9UEE9 299 aaPredicted RBP22.28■■□□□ 1.16
HNRNPU-214ENST00000638475 WDR7Q9Y4E6 1490 aa22.27■■□□□ 1.16
HNRNPU-214ENST00000638475 ZNF777Q9ULD5 760 aaPredicted RBP22.27■■□□□ 1.16
HNRNPU-214ENST00000638475 ABCC10Q5T3U5 1492 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 250.6 ms