RNA–Protein interactions for RNA: ENST00000638251.1

RTTN-211, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 4,801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-211ENST00000638251 CDK11AQ9UQ88 783 aaPredicted RBP10.33□□□□□ -0.76
RTTN-211ENST00000638251 FMN1Q68DA7 1419 aa10.31□□□□□ -0.76
RTTN-211ENST00000638251 WDR62O43379 1518 aa10.3□□□□□ -0.76
RTTN-211ENST00000638251 ITGAEP38570 1179 aa10.3□□□□□ -0.76
RTTN-211ENST00000638251 FAM50AQ14320 339 aaKnown RBP10.29□□□□□ -0.76
RTTN-211ENST00000638251 HRCP23327 699 aa10.28□□□□□ -0.76
RTTN-211ENST00000638251 CARMIL2Q6F5E8 1435 aa10.28□□□□□ -0.76
RTTN-211ENST00000638251 MTUS2Q5JR59 1369 aa10.27□□□□□ -0.77
RTTN-211ENST00000638251 EFCAB5A4FU69 1503 aa10.26□□□□□ -0.77
RTTN-211ENST00000638251 SNAPC4Q5SXM2 1469 aa10.25□□□□□ -0.77
RTTN-211ENST00000638251 FHOD3Q2V2M9 1422 aa10.25□□□□□ -0.77
RTTN-211ENST00000638251 WDR97A6NE52 1622 aa10.24□□□□□ -0.77
RTTN-211ENST00000638251 ARID3CA6NKF2 412 aa10.24□□□□□ -0.77
RTTN-211ENST00000638251 MAGI1Q96QZ7 1491 aaPredicted RBP10.24□□□□□ -0.77
RTTN-211ENST00000638251 ARHGAP35Q9NRY4 1499 aa10.22□□□□□ -0.77
RTTN-211ENST00000638251 ABCA5Q8WWZ7 1642 aa10.21□□□□□ -0.77
RTTN-211ENST00000638251 ZNF608Q9ULD9 1512 aaPredicted RBP10.21□□□□□ -0.77
RTTN-211ENST00000638251 ARAP1Q96P48 1450 aa10.21□□□□□ -0.78
RTTN-211ENST00000638251 SYNJ2O15056 1496 aa10.2□□□□□ -0.78
RTTN-211ENST00000638251 JPH4Q96JJ6 628 aa10.19□□□□□ -0.78
RTTN-211ENST00000638251 TARBP1Q13395 1621 aaKnown RBP10.19□□□□□ -0.78
RTTN-211ENST00000638251 MYT1Q01538 1121 aa10.19□□□□□ -0.78
RTTN-211ENST00000638251 KIAA0586Q9BVV6 1533 aa10.17□□□□□ -0.78
RTTN-211ENST00000638251 GRIN2AQ12879 1464 aa10.17□□□□□ -0.78
RTTN-211ENST00000638251 ADAMTS12P58397 1594 aa10.17□□□□□ -0.78
RTTN-211ENST00000638251 PBRM1Q86U86 1689 aa10.17□□□□□ -0.78
RTTN-211ENST00000638251 PLEKHD1A6NEE1 506 aa10.17□□□□□ -0.78
RTTN-211ENST00000638251 IQGAP2Q13576 1575 aa10.17□□□□□ -0.78
RTTN-211ENST00000638251 CASKIN1Q8WXD9 1431 aa10.16□□□□□ -0.78
RTTN-211ENST00000638251 THOC2Q8NI27 1593 aaKnown RBP10.16□□□□□ -0.78
RTTN-211ENST00000638251 KANK4Q5T7N3 995 aaPredicted RBP10.16□□□□□ -0.78
RTTN-211ENST00000638251 EIF4G3O43432 1585 aaKnown RBP10.15□□□□□ -0.78
RTTN-211ENST00000638251 FYCO1Q9BQS8 1478 aa10.15□□□□□ -0.78
RTTN-211ENST00000638251 NPM1P06748 294 aaKnown RBP eCLIP10.14□□□□□ -0.79
RTTN-211ENST00000638251 CTTNBP2Q8WZ74 1663 aa10.14□□□□□ -0.79
RTTN-211ENST00000638251 CCNB3Q8WWL7 1395 aa10.14□□□□□ -0.79
RTTN-211ENST00000638251 CCDC18Q5T9S5 1454 aa10.13□□□□□ -0.79
RTTN-211ENST00000638251 ZNF777Q9ULD5 760 aaPredicted RBP10.11□□□□□ -0.79
RTTN-211ENST00000638251 PTPRGP23470 1445 aa10.1□□□□□ -0.79
RTTN-211ENST00000638251 MYT1LQ9UL68 1186 aa10.09□□□□□ -0.79
RTTN-211ENST00000638251 LRRC9Q6ZRR7 1453 aa10.08□□□□□ -0.8
RTTN-211ENST00000638251 MAP3K1Q13233 1512 aa10.08□□□□□ -0.8
RTTN-211ENST00000638251 HECW1Q76N89 1606 aa10.08□□□□□ -0.8
RTTN-211ENST00000638251 TRIM52Q96A61 297 aa10.07□□□□□ -0.8
RTTN-211ENST00000638251 ACIN1Q9UKV3 1341 aaKnown RBP10.07□□□□□ -0.8
RTTN-211ENST00000638251 TIAM1Q13009 1591 aa10.07□□□□□ -0.8
RTTN-211ENST00000638251 OSCARQ8IYS5 282 aa10.07□□□□□ -0.8
RTTN-211ENST00000638251 PRG4Q92954 1404 aaPredicted RBP10.07□□□□□ -0.8
RTTN-211ENST00000638251 PELP1Q8IZL8 1130 aaKnown RBP10.06□□□□□ -0.8
RTTN-211ENST00000638251 CFDP1Q9UEE9 299 aaPredicted RBP10.06□□□□□ -0.8
RTTN-211ENST00000638251 PCF11O94913 1555 aaKnown RBP10.06□□□□□ -0.8
RTTN-211ENST00000638251 UGGT2Q9NYU1 1516 aa10.05□□□□□ -0.8
RTTN-211ENST00000638251 EHBP1L1Q8N3D4 1523 aa10.03□□□□□ -0.8
RTTN-211ENST00000638251 TSPY4P0CV99 314 aa10.03□□□□□ -0.8
RTTN-211ENST00000638251 TSPY10P0CW01 314 aa10.03□□□□□ -0.8
RTTN-211ENST00000638251 NUP160Q12769 1436 aa10.02□□□□□ -0.81
RTTN-211ENST00000638251 KCNH8Q96L42 1107 aa10.02□□□□□ -0.81
RTTN-211ENST00000638251 CHIC2Q9UKJ5 165 aa10.01□□□□□ -0.81
RTTN-211ENST00000638251 SAMD9Q5K651 1589 aa10□□□□□ -0.81
RTTN-211ENST00000638251 RRBP1Q9P2E9 1410 aaKnown RBP10□□□□□ -0.81
RTTN-211ENST00000638251 KIAA0556O60303 1618 aa9.99□□□□□ -0.81
RTTN-211ENST00000638251 EPRSP07814 1512 aaKnown RBP9.99□□□□□ -0.81
RTTN-211ENST00000638251 MYOM3Q5VTT5 1437 aa9.99□□□□□ -0.81
RTTN-211ENST00000638251 NCOA2Q15596 1464 aa9.99□□□□□ -0.81
RTTN-211ENST00000638251 SETD5Q9C0A6 1442 aa9.98□□□□□ -0.81
RTTN-211ENST00000638251 CLSPNQ9HAW4 1339 aa9.98□□□□□ -0.81
RTTN-211ENST00000638251 PHLDB1Q86UU1 1377 aa9.98□□□□□ -0.81
RTTN-211ENST00000638251 FGD6Q6ZV73 1430 aa9.97□□□□□ -0.81
RTTN-211ENST00000638251 CEP170Q5SW79 1584 aa9.97□□□□□ -0.81
RTTN-211ENST00000638251 SUPT6HQ7KZ85 1726 aaKnown RBP9.97□□□□□ -0.81
RTTN-211ENST00000638251 NEUROD1Q13562 356 aa9.96□□□□□ -0.81
RTTN-211ENST00000638251 RRP7BPQ9NSQ0 103 aa9.96□□□□□ -0.81
RTTN-211ENST00000638251 UACAQ9BZF9 1416 aa9.95□□□□□ -0.82
RTTN-211ENST00000638251 RAPGEF6Q8TEU7 1601 aa9.95□□□□□ -0.82
RTTN-211ENST00000638251 CFAP43Q8NDM7 1665 aa9.94□□□□□ -0.82
RTTN-211ENST00000638251 TROQ12816 1431 aaPredicted RBP9.94□□□□□ -0.82
RTTN-211ENST00000638251 DISP1Q96F81 1524 aa9.94□□□□□ -0.82
RTTN-211ENST00000638251 CDK13Q14004 1512 aaKnown RBP9.94□□□□□ -0.82
RTTN-211ENST00000638251 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.93□□□□□ -0.82
RTTN-211ENST00000638251 PLB1Q6P1J6 1458 aa9.93□□□□□ -0.82
RTTN-211ENST00000638251 MIA2Q96PC5 1412 aa9.93□□□□□ -0.82
RTTN-211ENST00000638251 RSPH4AQ5TD94 716 aa9.92□□□□□ -0.82
RTTN-211ENST00000638251 RAB3GAP2Q9H2M9 1393 aa9.91□□□□□ -0.82
RTTN-211ENST00000638251 EFCAB2Q5VUJ9 269 aa9.91□□□□□ -0.82
RTTN-211ENST00000638251 TONSLQ96HA7 1378 aa9.89□□□□□ -0.83
RTTN-211ENST00000638251 ANKRD30AQ9BXX3 1397 aa9.89□□□□□ -0.83
RTTN-211ENST00000638251 NUP153P49790 1475 aaKnown RBP9.89□□□□□ -0.83
RTTN-211ENST00000638251 CHD1O14646 1710 aa9.88□□□□□ -0.83
RTTN-211ENST00000638251 SLC4A1APQ9BWU0 796 aaKnown RBP9.87□□□□□ -0.83
RTTN-211ENST00000638251 KIF14Q15058 1648 aa9.86□□□□□ -0.83
RTTN-211ENST00000638251 ZNF316A6NFI3 1004 aaPredicted RBP9.86□□□□□ -0.83
RTTN-211ENST00000638251 PTPN23Q9H3S7 1636 aa9.84□□□□□ -0.83
RTTN-211ENST00000638251 HNRNPMP52272 730 aaKnown RBP eCLIP9.84□□□□□ -0.83
RTTN-211ENST00000638251 TIMELESSQ9UNS1 1208 aa9.84□□□□□ -0.83
RTTN-211ENST00000638251 ATP10BO94823 1461 aa9.83□□□□□ -0.84
RTTN-211ENST00000638251 PLEKHH2Q8IVE3 1493 aa9.83□□□□□ -0.84
RTTN-211ENST00000638251 DHX57Q6P158 1386 aaKnown RBP9.83□□□□□ -0.84
RTTN-211ENST00000638251 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.83□□□□□ -0.84
RTTN-211ENST00000638251 ARHGAP5Q13017 1502 aa9.82□□□□□ -0.84
RTTN-211ENST00000638251 CYB5RLQ6IPT4 315 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms