RNA–Protein interactions for RNA: ENST00000638251.1

RTTN-211, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 4,801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-211ENST00000638251 NISCHQ9Y2I1 1504 aa14.68□□□□□ -0.06
RTTN-211ENST00000638251 DCAF8L2P0C7V8 631 aa12.74□□□□□ -0.37
RTTN-211ENST00000638251 CCDC180Q9P1Z9 1646 aa12.7□□□□□ -0.38
RTTN-211ENST00000638251 SHROOM4Q9ULL8 1493 aa12.33□□□□□ -0.43
RTTN-211ENST00000638251 ZCCHC6Q5VYS8 1495 aaKnown RBP12.29□□□□□ -0.44
RTTN-211ENST00000638251 ABCC9O60706 1549 aa12.23□□□□□ -0.45
RTTN-211ENST00000638251 DCAF1Q9Y4B6 1507 aa12.07□□□□□ -0.48
RTTN-211ENST00000638251 SUPT5HO00267 1087 aaKnown RBP12.03□□□□□ -0.48
RTTN-211ENST00000638251 NACADO15069 1562 aa11.96□□□□□ -0.49
RTTN-211ENST00000638251 RB1CC1Q8TDY2 1594 aa11.91□□□□□ -0.5
RTTN-211ENST00000638251 MYO15BQ96JP2 1530 aa11.9□□□□□ -0.5
RTTN-211ENST00000638251 SCRIBQ14160 1630 aa11.84□□□□□ -0.51
RTTN-211ENST00000638251 PABPN1Q86U42 306 aaKnown RBP eCLIP11.65□□□□□ -0.54
RTTN-211ENST00000638251 RSF1Q96T23 1441 aaPredicted RBP11.43□□□□□ -0.58
RTTN-211ENST00000638251 BAZ1AQ9NRL2 1556 aaPredicted RBP11.42□□□□□ -0.58
RTTN-211ENST00000638251 CECR2Q9BXF3 1484 aa11.37□□□□□ -0.59
RTTN-211ENST00000638251 TRIM41Q8WV44 630 aa11.34□□□□□ -0.59
RTTN-211ENST00000638251 MROH2BQ7Z745 1585 aa11.3□□□□□ -0.6
RTTN-211ENST00000638251 CHIC1Q5VXU3 224 aa11.3□□□□□ -0.6
RTTN-211ENST00000638251 SMARCA4P51532 1647 aa11.25□□□□□ -0.61
RTTN-211ENST00000638251 UNC13AQ9UPW8 1703 aa11.23□□□□□ -0.61
RTTN-211ENST00000638251 BICRAQ9NZM4 1560 aa11.22□□□□□ -0.61
RTTN-211ENST00000638251 BAZ1BQ9UIG0 1483 aaKnown RBP11.21□□□□□ -0.61
RTTN-211ENST00000638251 SMARCA2P51531 1590 aa11.21□□□□□ -0.62
RTTN-211ENST00000638251 WIZO95785 1651 aa11.19□□□□□ -0.62
RTTN-211ENST00000638251 TOP2AP11388 1531 aaKnown RBP11.17□□□□□ -0.62
RTTN-211ENST00000638251 FAM9AQ8IZU1 332 aaPredicted RBP11.15□□□□□ -0.62
RTTN-211ENST00000638251 ATAD2BQ9ULI0 1458 aa11.12□□□□□ -0.63
RTTN-211ENST00000638251 EIF4G1Q04637 1599 aaKnown RBP11.07□□□□□ -0.64
RTTN-211ENST00000638251 CCDC88BA6NC98 1476 aa11.07□□□□□ -0.64
RTTN-211ENST00000638251 EHMT2Q96KQ7 1210 aa11.06□□□□□ -0.64
RTTN-211ENST00000638251 NCAPD3P42695 1498 aa11.01□□□□□ -0.65
RTTN-211ENST00000638251 PEG3Q9GZU2 1588 aa10.98□□□□□ -0.65
RTTN-211ENST00000638251 HMGXB3Q12766 1538 aa10.96□□□□□ -0.65
RTTN-211ENST00000638251 UBTFP17480 764 aaKnown RBP10.95□□□□□ -0.66
RTTN-211ENST00000638251 WRNQ14191 1432 aaPredicted RBP eCLIP10.92□□□□□ -0.66
RTTN-211ENST00000638251 LOC105371045A0A1W2PR82 267 aa10.91□□□□□ -0.66
RTTN-211ENST00000638251 CC2D2AQ9P2K1 1620 aa10.9□□□□□ -0.66
RTTN-211ENST00000638251 EEA1Q15075 1411 aa10.86□□□□□ -0.67
RTTN-211ENST00000638251 APLP2Q06481 763 aa10.86□□□□□ -0.67
RTTN-211ENST00000638251 CADPSQ9ULU8 1353 aa10.85□□□□□ -0.67
RTTN-211ENST00000638251 CSRNP3Q8WYN3 585 aa10.85□□□□□ -0.67
RTTN-211ENST00000638251 ABCC8Q09428 1581 aa10.82□□□□□ -0.68
RTTN-211ENST00000638251 PDS5BQ9NTI5 1447 aa10.79□□□□□ -0.68
RTTN-211ENST00000638251 RANGAP1P46060 587 aaPredicted RBP10.78□□□□□ -0.68
RTTN-211ENST00000638251 CFTRP13569 1480 aa10.77□□□□□ -0.69
RTTN-211ENST00000638251 KIF27Q86VH2 1401 aa10.73□□□□□ -0.69
RTTN-211ENST00000638251 FANCD2Q9BXW9 1451 aa10.72□□□□□ -0.69
RTTN-211ENST00000638251 CEP164Q9UPV0 1460 aa10.71□□□□□ -0.7
RTTN-211ENST00000638251 GOLGA3Q08378 1498 aa10.7□□□□□ -0.7
RTTN-211ENST00000638251 ERCC6Q03468 1493 aa10.69□□□□□ -0.7
RTTN-211ENST00000638251 SOGA1O94964 1423 aa10.69□□□□□ -0.7
RTTN-211ENST00000638251 PCGF6Q9BYE7 350 aa10.66□□□□□ -0.7
RTTN-211ENST00000638251 LAMC3Q9Y6N6 1575 aa10.65□□□□□ -0.71
RTTN-211ENST00000638251 CUX2O14529 1486 aa10.64□□□□□ -0.71
RTTN-211ENST00000638251 TNIKQ9UKE5 1360 aa10.63□□□□□ -0.71
RTTN-211ENST00000638251 TRIM26Q12899 539 aaPredicted RBP10.63□□□□□ -0.71
RTTN-211ENST00000638251 TOP2BQ02880 1626 aa10.63□□□□□ -0.71
RTTN-211ENST00000638251 SYNJ1O43426 1573 aa10.63□□□□□ -0.71
RTTN-211ENST00000638251 ATP1B4Q9UN42 357 aaPredicted RBP10.61□□□□□ -0.71
RTTN-211ENST00000638251 TTBK1Q5TCY1 1321 aaPredicted RBP10.61□□□□□ -0.71
RTTN-211ENST00000638251 NESP48681 1621 aa10.6□□□□□ -0.71
RTTN-211ENST00000638251 FGD5Q6ZNL6 1462 aa10.58□□□□□ -0.72
RTTN-211ENST00000638251 CUX1P39880 1505 aa10.58□□□□□ -0.72
RTTN-211ENST00000638251 CEP162Q5TB80 1403 aa10.57□□□□□ -0.72
RTTN-211ENST00000638251 CLIP1P30622 1438 aa10.56□□□□□ -0.72
RTTN-211ENST00000638251 DNMBPQ6XZF7 1577 aa10.55□□□□□ -0.72
RTTN-211ENST00000638251 DNAJC5BQ9UF47 199 aa10.55□□□□□ -0.72
RTTN-211ENST00000638251 CARMIL1Q5VZK9 1371 aa10.55□□□□□ -0.72
RTTN-211ENST00000638251 PPARGC1BQ86YN6 1023 aaKnown RBP10.55□□□□□ -0.72
RTTN-211ENST00000638251 BIVM-ERCC5R4GMW8 1640 aa10.55□□□□□ -0.72
RTTN-211ENST00000638251 RUSC2Q8N2Y8 1516 aa10.54□□□□□ -0.72
RTTN-211ENST00000638251 PRDM2Q13029 1718 aa10.53□□□□□ -0.72
RTTN-211ENST00000638251 TOPBP1Q92547 1522 aa10.53□□□□□ -0.72
RTTN-211ENST00000638251 MRC2Q9UBG0 1479 aa10.53□□□□□ -0.72
RTTN-211ENST00000638251 FBLN2P98095 1184 aa10.52□□□□□ -0.72
RTTN-211ENST00000638251 RAPGEF2Q9Y4G8 1499 aa10.49□□□□□ -0.73
RTTN-211ENST00000638251 KIF21BO75037 1637 aa10.49□□□□□ -0.73
RTTN-211ENST00000638251 TDRD9Q8NDG6 1382 aaKnown RBP10.48□□□□□ -0.73
RTTN-211ENST00000638251 RAD54L2Q9Y4B4 1467 aa10.48□□□□□ -0.73
RTTN-211ENST00000638251 CHMP7Q8WUX9 453 aaPredicted RBP10.47□□□□□ -0.73
RTTN-211ENST00000638251 POLA1P09884 1462 aaPredicted RBP10.47□□□□□ -0.73
RTTN-211ENST00000638251 IGF1RP08069 1367 aa10.46□□□□□ -0.74
RTTN-211ENST00000638251 ERICH3Q5RHP9 1530 aa10.45□□□□□ -0.74
RTTN-211ENST00000638251 P3H3Q8IVL6 736 aa10.45□□□□□ -0.74
RTTN-211ENST00000638251 GAPVD1Q14C86 1478 aa10.45□□□□□ -0.74
RTTN-211ENST00000638251 ZEB1P37275 1124 aaPredicted RBP10.44□□□□□ -0.74
RTTN-211ENST00000638251 ABCA10Q8WWZ4 1543 aa10.43□□□□□ -0.74
RTTN-211ENST00000638251 IFT140Q96RY7 1462 aa10.43□□□□□ -0.74
RTTN-211ENST00000638251 URB2Q14146 1524 aaKnown RBP10.43□□□□□ -0.74
RTTN-211ENST00000638251 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.42□□□□□ -0.74
RTTN-211ENST00000638251 HNRNPUL2Q1KMD3 747 aaKnown RBP10.42□□□□□ -0.74
RTTN-211ENST00000638251 PRXQ9BXM0 1461 aa10.41□□□□□ -0.74
RTTN-211ENST00000638251 VPS8Q8N3P4 1428 aa10.39□□□□□ -0.75
RTTN-211ENST00000638251 FHAD1B1AJZ9 1412 aa10.38□□□□□ -0.75
RTTN-211ENST00000638251 CCER1Q8TC90 406 aaPredicted RBP10.38□□□□□ -0.75
RTTN-211ENST00000638251 GRIN2BQ13224 1484 aa10.37□□□□□ -0.75
RTTN-211ENST00000638251 KIF21AQ7Z4S6 1674 aa10.37□□□□□ -0.75
RTTN-211ENST00000638251 AQRO60306 1485 aaKnown RBP eCLIP10.35□□□□□ -0.755e-8■■■■■ 34.8
RTTN-211ENST00000638251 CUL7Q14999 1698 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms