RNA–Protein interactions for RNA: ENST00000636881.1

CHD2-226, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 3,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-226ENST00000636881 PRXQ9BXM0 1461 aa11.93□□□□□ -0.5
CHD2-226ENST00000636881 PEG3Q9GZU2 1588 aa11.93□□□□□ -0.5
CHD2-226ENST00000636881 SETD5Q9C0A6 1442 aa11.93□□□□□ -0.5
CHD2-226ENST00000636881 FANCIQ9NVI1 1328 aa11.92□□□□□ -0.5
CHD2-226ENST00000636881 FAM50AQ14320 339 aaKnown RBP11.89□□□□□ -0.51
CHD2-226ENST00000636881 IRX6P78412 446 aaPredicted RBP11.88□□□□□ -0.51
CHD2-226ENST00000636881 TIMELESSQ9UNS1 1208 aa11.88□□□□□ -0.51
CHD2-226ENST00000636881 BIVM-ERCC5R4GMW8 1640 aa11.87□□□□□ -0.51
CHD2-226ENST00000636881 MYT1LQ9UL68 1186 aa11.87□□□□□ -0.51
CHD2-226ENST00000636881 HNRNPUQ00839 825 aaKnown RBP eCLIP11.86□□□□□ -0.51
CHD2-226ENST00000636881 ARHGAP35Q9NRY4 1499 aa11.86□□□□□ -0.51
CHD2-226ENST00000636881 ATAD2BQ9ULI0 1458 aa11.85□□□□□ -0.51
CHD2-226ENST00000636881 KIF27Q86VH2 1401 aa11.84□□□□□ -0.51
CHD2-226ENST00000636881 TIAM1Q13009 1591 aa11.81□□□□□ -0.52
CHD2-226ENST00000636881 TONSLQ96HA7 1378 aa11.81□□□□□ -0.52
CHD2-226ENST00000636881 DEKP35659 375 aaKnown RBP11.8□□□□□ -0.52
CHD2-226ENST00000636881 BICRAQ9NZM4 1560 aa11.8□□□□□ -0.52
CHD2-226ENST00000636881 PPP4R2Q9NY27 417 aa11.79□□□□□ -0.52
CHD2-226ENST00000636881 PHLDB1Q86UU1 1377 aa11.79□□□□□ -0.52
CHD2-226ENST00000636881 ATP1B4Q9UN42 357 aaPredicted RBP11.78□□□□□ -0.52
CHD2-226ENST00000636881 LRRC9Q6ZRR7 1453 aa11.77□□□□□ -0.52
CHD2-226ENST00000636881 ERICH6BQ5W0A0 696 aa11.77□□□□□ -0.52
CHD2-226ENST00000636881 MAP3K1Q13233 1512 aa11.77□□□□□ -0.53
CHD2-226ENST00000636881 CUX1P39880 1505 aa11.74□□□□□ -0.53
CHD2-226ENST00000636881 NBR1Q14596 966 aa11.72□□□□□ -0.53
CHD2-226ENST00000636881 B4GALNT3Q6L9W6 998 aa11.72□□□□□ -0.53
CHD2-226ENST00000636881 NOP58Q9Y2X3 529 aaKnown RBP11.72□□□□□ -0.53
CHD2-226ENST00000636881 FHAD1B1AJZ9 1412 aa11.7□□□□□ -0.54
CHD2-226ENST00000636881 P3H3Q8IVL6 736 aa11.69□□□□□ -0.54
CHD2-226ENST00000636881 PRKCSHP14314 528 aaPredicted RBP11.69□□□□□ -0.54
CHD2-226ENST00000636881 CFAP43Q8NDM7 1665 aa11.67□□□□□ -0.54
CHD2-226ENST00000636881 FAM9BQ8IZU0 186 aa11.67□□□□□ -0.54
CHD2-226ENST00000636881 CCDC18Q5T9S5 1454 aa11.66□□□□□ -0.54
CHD2-226ENST00000636881 RTL5Q5HYW3 569 aaPredicted RBP11.66□□□□□ -0.54
CHD2-226ENST00000636881 PCF11O94913 1555 aaKnown RBP11.65□□□□□ -0.54
CHD2-226ENST00000636881 CARMIL1Q5VZK9 1371 aa11.65□□□□□ -0.55
CHD2-226ENST00000636881 HSPA5P11021 654 aaKnown RBP11.64□□□□□ -0.55
CHD2-226ENST00000636881 IGF1RP08069 1367 aa11.64□□□□□ -0.55
CHD2-226ENST00000636881 WASHC2AQ641Q2 1341 aa11.64□□□□□ -0.55
CHD2-226ENST00000636881 ANP32AP39687 249 aaKnown RBP11.63□□□□□ -0.55
CHD2-226ENST00000636881 MRS2Q9HD23 443 aa11.63□□□□□ -0.55
CHD2-226ENST00000636881 UACAQ9BZF9 1416 aa11.63□□□□□ -0.55
CHD2-226ENST00000636881 PAK3O75914 559 aaPredicted RBP11.63□□□□□ -0.55
CHD2-226ENST00000636881 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.63□□□□□ -0.55
CHD2-226ENST00000636881 CCDC184Q52MB2 194 aa11.62□□□□□ -0.55
CHD2-226ENST00000636881 EIF4G2P78344 907 aaKnown RBP eCLIP11.61□□□□□ -0.55
CHD2-226ENST00000636881 ZBED9Q6R2W3 1325 aa11.61□□□□□ -0.55
CHD2-226ENST00000636881 CNTLNQ9NXG0 1405 aa11.61□□□□□ -0.55
CHD2-226ENST00000636881 FGD6Q6ZV73 1430 aa11.6□□□□□ -0.55
CHD2-226ENST00000636881 ZBTB47Q9UFB7 747 aaPredicted RBP11.59□□□□□ -0.55
CHD2-226ENST00000636881 FHOD3Q2V2M9 1422 aa11.59□□□□□ -0.55
CHD2-226ENST00000636881 HFM1A2PYH4 1435 aa11.58□□□□□ -0.56
CHD2-226ENST00000636881 PTPN23Q9H3S7 1636 aa11.58□□□□□ -0.56
CHD2-226ENST00000636881 PRKRIP1Q9H875 184 aaPredicted RBP11.58□□□□□ -0.56
CHD2-226ENST00000636881 FYCO1Q9BQS8 1478 aa11.57□□□□□ -0.56
CHD2-226ENST00000636881 CCDC136Q96JN2 1154 aa11.57□□□□□ -0.56
CHD2-226ENST00000636881 IPO9Q96P70 1041 aaKnown RBP11.57□□□□□ -0.56
CHD2-226ENST00000636881 MTUS2Q5JR59 1369 aa11.56□□□□□ -0.56
CHD2-226ENST00000636881 ANO8Q9HCE9 1232 aaPredicted RBP11.56□□□□□ -0.56
CHD2-226ENST00000636881 NCOA2Q15596 1464 aa11.56□□□□□ -0.56
CHD2-226ENST00000636881 CFTRP13569 1480 aa11.55□□□□□ -0.56
CHD2-226ENST00000636881 CASKIN1Q8WXD9 1431 aa11.55□□□□□ -0.56
CHD2-226ENST00000636881 FMN1Q68DA7 1419 aa11.55□□□□□ -0.56
CHD2-226ENST00000636881 PTPRKQ15262 1439 aa11.54□□□□□ -0.56
CHD2-226ENST00000636881 FGD5Q6ZNL6 1462 aa11.54□□□□□ -0.56
CHD2-226ENST00000636881 KDM5BQ9UGL1 1544 aa11.54□□□□□ -0.56
CHD2-226ENST00000636881 NAIPQ13075 1403 aa11.53□□□□□ -0.56
CHD2-226ENST00000636881 HMGXB3Q12766 1538 aa11.53□□□□□ -0.56
CHD2-226ENST00000636881 CCDC7Q96M83 1385 aa11.53□□□□□ -0.56
CHD2-226ENST00000636881 AQRO60306 1485 aaKnown RBP eCLIP11.52□□□□□ -0.573e-7■■■■□ 19.6
CHD2-226ENST00000636881 NCAPD3P42695 1498 aa11.51□□□□□ -0.57
CHD2-226ENST00000636881 AKNAQ7Z591 1439 aa11.51□□□□□ -0.57
CHD2-226ENST00000636881 RRP7BPQ9NSQ0 103 aa11.51□□□□□ -0.57
CHD2-226ENST00000636881 CNGB1Q14028 1251 aaPredicted RBP11.51□□□□□ -0.57
CHD2-226ENST00000636881 EFCAB5A4FU69 1503 aa11.5□□□□□ -0.57
CHD2-226ENST00000636881 C11orf95C9JLR9 678 aaPredicted RBP11.5□□□□□ -0.57
CHD2-226ENST00000636881 NUDCQ9Y266 331 aa11.5□□□□□ -0.57
CHD2-226ENST00000636881 SMG6Q86US8 1419 aaKnown RBP11.5□□□□□ -0.57
CHD2-226ENST00000636881 NPM2Q86SE8 214 aaKnown RBP11.49□□□□□ -0.57
CHD2-226ENST00000636881 CHIC2Q9UKJ5 165 aa11.49□□□□□ -0.57
CHD2-226ENST00000636881 SALL2Q9Y467 1007 aaPredicted RBP11.49□□□□□ -0.57
CHD2-226ENST00000636881 NCOA1Q15788 1441 aa11.49□□□□□ -0.57
CHD2-226ENST00000636881 RTN4Q9NQC3 1192 aaKnown RBP11.48□□□□□ -0.57
CHD2-226ENST00000636881 IL27Q8NEV9 243 aa11.48□□□□□ -0.57
CHD2-226ENST00000636881 L3MBTL2Q969R5 705 aa11.48□□□□□ -0.57
CHD2-226ENST00000636881 MYOM3Q5VTT5 1437 aa11.48□□□□□ -0.57
CHD2-226ENST00000636881 PRDM2Q13029 1718 aa11.47□□□□□ -0.57
CHD2-226ENST00000636881 POLR3GLQ9BT43 218 aa11.45□□□□□ -0.58
CHD2-226ENST00000636881 LAS1LQ9Y4W2 734 aaKnown RBP11.44□□□□□ -0.58
CHD2-226ENST00000636881 KIF7Q2M1P5 1343 aa11.44□□□□□ -0.58
CHD2-226ENST00000636881 NEFMP07197 916 aa11.44□□□□□ -0.58
CHD2-226ENST00000636881 HECW1Q76N89 1606 aa11.44□□□□□ -0.58
CHD2-226ENST00000636881 SENP3-EIF4A1A0A087X0R7 540 aa11.43□□□□□ -0.58
CHD2-226ENST00000636881 MPHOSPH9Q99550 1183 aa11.43□□□□□ -0.58
CHD2-226ENST00000636881 SUPT6HQ7KZ85 1726 aaKnown RBP11.43□□□□□ -0.58
CHD2-226ENST00000636881 FOXD1Q16676 465 aa11.43□□□□□ -0.58
CHD2-226ENST00000636881 RNF123Q5XPI4 1314 aa11.42□□□□□ -0.58
CHD2-226ENST00000636881 AEBP2Q6ZN18 517 aaPredicted RBP11.42□□□□□ -0.58
CHD2-226ENST00000636881 CTTNBP2Q8WZ74 1663 aa11.42□□□□□ -0.58
CHD2-226ENST00000636881 SNAPC4Q5SXM2 1469 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms