RNA–Protein interactions for RNA: ENST00000635137.1

PATJ-215, Transcript of PATJ, crumbs cell polarity complex component, human

TSL 1 (best) BASIC

Gene PATJ, Length 2,298 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PATJ-215	ENST00000635137	CHMP7	Q8WUX9	453 aa	Predicted RBP	19.61	■□□□□ 0.73
PATJ-215	ENST00000635137	ARHGAP35	Q9NRY4	1499 aa		19.59	■□□□□ 0.73
PATJ-215	ENST00000635137	GRIN2A	Q12879	1464 aa		19.58	■□□□□ 0.73
PATJ-215	ENST00000635137	EFCAB5	A4FU69	1503 aa		19.58	■□□□□ 0.73
PATJ-215	ENST00000635137	ARAP1	Q96P48	1450 aa		19.55	■□□□□ 0.72
PATJ-215	ENST00000635137	APLP2	Q06481	763 aa		19.54	■□□□□ 0.72
PATJ-215	ENST00000635137	IQGAP2	Q13576	1575 aa		19.52	■□□□□ 0.72
PATJ-215	ENST00000635137	FBLN2	P98095	1184 aa		19.52	■□□□□ 0.72
PATJ-215	ENST00000635137	KIAA0586	Q9BVV6	1533 aa		19.52	■□□□□ 0.71
PATJ-215	ENST00000635137	TRIM26	Q12899	539 aa	Predicted RBP	19.48	■□□□□ 0.71
PATJ-215	ENST00000635137	SAMD9	Q5K651	1589 aa		19.46	■□□□□ 0.71
PATJ-215	ENST00000635137	NUP160	Q12769	1436 aa		19.44	■□□□□ 0.7
PATJ-215	ENST00000635137	UGGT2	Q9NYU1	1516 aa		19.43	■□□□□ 0.7
PATJ-215	ENST00000635137	FMN1	Q68DA7	1419 aa		19.43	■□□□□ 0.7
PATJ-215	ENST00000635137	P3H3	Q8IVL6	736 aa		19.42	■□□□□ 0.7
PATJ-215	ENST00000635137	CEP170	Q5SW79	1584 aa		19.41	■□□□□ 0.7
PATJ-215	ENST00000635137	FHOD3	Q2V2M9	1422 aa		19.4	■□□□□ 0.7
PATJ-215	ENST00000635137	CHD1	O14646	1710 aa		19.37	■□□□□ 0.69
PATJ-215	ENST00000635137	PCGF6	Q9BYE7	350 aa		19.36	■□□□□ 0.69
PATJ-215	ENST00000635137	PPARGC1B	Q86YN6	1023 aa	Known RBP	19.35	■□□□□ 0.69
PATJ-215	ENST00000635137	MAP3K1	Q13233	1512 aa		19.34	■□□□□ 0.69
PATJ-215	ENST00000635137	CASKIN1	Q8WXD9	1431 aa		19.34	■□□□□ 0.69
PATJ-215	ENST00000635137	JPH4	Q96JJ6	628 aa		19.34	■□□□□ 0.69
PATJ-215	ENST00000635137	FYCO1	Q9BQS8	1478 aa		19.33	■□□□□ 0.69
PATJ-215	ENST00000635137	CARMIL2	Q6F5E8	1435 aa		19.33	■□□□□ 0.69
PATJ-215	ENST00000635137	KIAA0556	O60303	1618 aa		19.3	■□□□□ 0.68
PATJ-215	ENST00000635137	DISP1	Q96F81	1524 aa		19.29	■□□□□ 0.68
PATJ-215	ENST00000635137	PCF11	O94913	1555 aa	Known RBP	19.28	■□□□□ 0.68
PATJ-215	ENST00000635137	ATP1B4	Q9UN42	357 aa	Predicted RBP	19.27	■□□□□ 0.68
PATJ-215	ENST00000635137	TIAM1	Q13009	1591 aa		19.25	■□□□□ 0.67
PATJ-215	ENST00000635137	HRC	P23327	699 aa		19.24	■□□□□ 0.67
PATJ-215	ENST00000635137	TTBK1	Q5TCY1	1321 aa	Predicted RBP	19.22	■□□□□ 0.67
PATJ-215	ENST00000635137	CFAP43	Q8NDM7	1665 aa		19.21	■□□□□ 0.67
PATJ-215	ENST00000635137	HECW1	Q76N89	1606 aa		19.19	■□□□□ 0.66
PATJ-215	ENST00000635137	CCDC18	Q5T9S5	1454 aa		19.19	■□□□□ 0.66
PATJ-215	ENST00000635137	KANK4	Q5T7N3	995 aa	Predicted RBP	19.18	■□□□□ 0.66
PATJ-215	ENST00000635137	SHROOM2	Q13796	1616 aa		19.18	■□□□□ 0.66
PATJ-215	ENST00000635137	PRG4	Q92954	1404 aa	Predicted RBP	19.18	■□□□□ 0.66
PATJ-215	ENST00000635137	LRRC9	Q6ZRR7	1453 aa		19.17	■□□□□ 0.66
PATJ-215	ENST00000635137	CLASP1	Q7Z460	1538 aa		19.16	■□□□□ 0.66
PATJ-215	ENST00000635137	RAPGEF6	Q8TEU7	1601 aa		19.12	■□□□□ 0.65
PATJ-215	ENST00000635137	OSCAR	Q8IYS5	282 aa		19.11	■□□□□ 0.65
PATJ-215	ENST00000635137	EPRS	P07814	1512 aa	Known RBP	19.1	■□□□□ 0.65
PATJ-215	ENST00000635137	MTUS2	Q5JR59	1369 aa		19.1	■□□□□ 0.65
PATJ-215	ENST00000635137	PTPRG	P23470	1445 aa		19.09	■□□□□ 0.65
PATJ-215	ENST00000635137	LRRIQ1	Q96JM4	1722 aa		19.08	■□□□□ 0.65
PATJ-215	ENST00000635137	CDK11A	Q9UQ88	783 aa	Predicted RBP	19.08	■□□□□ 0.65
PATJ-215	ENST00000635137	EHBP1L1	Q8N3D4	1523 aa		19.04	■□□□□ 0.64
PATJ-215	ENST00000635137	NUP153	P49790	1475 aa	Known RBP	19.04	■□□□□ 0.64
PATJ-215	ENST00000635137	PLB1	Q6P1J6	1458 aa		19.03	■□□□□ 0.64
PATJ-215	ENST00000635137	ABCA8	O94911	1581 aa		19.02	■□□□□ 0.64
PATJ-215	ENST00000635137	RRBP1	Q9P2E9	1410 aa	Known RBP	19.01	■□□□□ 0.63
PATJ-215	ENST00000635137	ERCC6L2	Q5T890	1561 aa		19.01	■□□□□ 0.63
PATJ-215	ENST00000635137	SUPT6H	Q7KZ85	1726 aa	Known RBP	19.01	■□□□□ 0.63
PATJ-215	ENST00000635137	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	19	■□□□□ 0.63
PATJ-215	ENST00000635137	HNRNPUL2	Q1KMD3	747 aa	Known RBP	19	■□□□□ 0.63
PATJ-215	ENST00000635137	CDK13	Q14004	1512 aa	Known RBP	18.98	■□□□□ 0.63
PATJ-215	ENST00000635137	CCNB3	Q8WWL7	1395 aa		18.97	■□□□□ 0.63
PATJ-215	ENST00000635137	UACA	Q9BZF9	1416 aa		18.97	■□□□□ 0.63
PATJ-215	ENST00000635137	PHLDB1	Q86UU1	1377 aa		18.94	■□□□□ 0.62
PATJ-215	ENST00000635137	NCOA2	Q15596	1464 aa		18.94	■□□□□ 0.62
PATJ-215	ENST00000635137	ARID3C	A6NKF2	412 aa		18.93	■□□□□ 0.62
PATJ-215	ENST00000635137	PLEKHD1	A6NEE1	506 aa		18.92	■□□□□ 0.62
PATJ-215	ENST00000635137	MAGI3	Q5TCQ9	1506 aa		18.92	■□□□□ 0.62
PATJ-215	ENST00000635137	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	18.91	■□□□□ 0.62
PATJ-215	ENST00000635137	ATP10B	O94823	1461 aa		18.9	■□□□□ 0.62
PATJ-215	ENST00000635137	TRO	Q12816	1431 aa	Predicted RBP	18.9	■□□□□ 0.62
PATJ-215	ENST00000635137	ABCC2	Q92887	1545 aa		18.9	■□□□□ 0.62
PATJ-215	ENST00000635137	ARHGEF11	O15085	1522 aa		18.89	■□□□□ 0.61
PATJ-215	ENST00000635137	UHRF1BP1L	A0JNW5	1464 aa		18.89	■□□□□ 0.61
PATJ-215	ENST00000635137	MYOM3	Q5VTT5	1437 aa		18.88	■□□□□ 0.61
PATJ-215	ENST00000635137	FGD6	Q6ZV73	1430 aa		18.86	■□□□□ 0.61
PATJ-215	ENST00000635137	FAM50A	Q14320	339 aa	Known RBP	18.84	■□□□□ 0.61
PATJ-215	ENST00000635137	MIA2	Q96PC5	1412 aa		18.83	■□□□□ 0.61
PATJ-215	ENST00000635137	ADCY10	Q96PN6	1610 aa		18.83	■□□□□ 0.61
PATJ-215	ENST00000635137	KIF14	Q15058	1648 aa		18.79	■□□□□ 0.6
PATJ-215	ENST00000635137	KDM5B	Q9UGL1	1544 aa		18.79	■□□□□ 0.6
PATJ-215	ENST00000635137	PTPN23	Q9H3S7	1636 aa		18.77	■□□□□ 0.59
PATJ-215	ENST00000635137	ITSN2	Q9NZM3	1697 aa		18.77	■□□□□ 0.59
PATJ-215	ENST00000635137	TCOF1	Q13428	1488 aa	Known RBP	18.75	■□□□□ 0.59
PATJ-215	ENST00000635137	ZEB1	P37275	1124 aa	Predicted RBP	18.75	■□□□□ 0.59
PATJ-215	ENST00000635137	ITGAE	P38570	1179 aa		18.75	■□□□□ 0.59
PATJ-215	ENST00000635137	ZCCHC11	Q5TAX3	1644 aa	Known RBP	18.75	■□□□□ 0.59
PATJ-215	ENST00000635137	NPM1	P06748	294 aa	Known RBP eCLIP	18.72	■□□□□ 0.59
PATJ-215	ENST00000635137	CFDP1	Q9UEE9	299 aa	Predicted RBP	18.71	■□□□□ 0.59
PATJ-215	ENST00000635137	CCER1	Q8TC90	406 aa	Predicted RBP	18.7	■□□□□ 0.58
PATJ-215	ENST00000635137	GPATCH8	Q9UKJ3	1502 aa	Known RBP	18.7	■□□□□ 0.58
PATJ-215	ENST00000635137	ABCC10	Q5T3U5	1492 aa		18.69	■□□□□ 0.58
PATJ-215	ENST00000635137	CDC42BPA	Q5VT25	1732 aa		18.66	■□□□□ 0.58
PATJ-215	ENST00000635137	SETD5	Q9C0A6	1442 aa		18.64	■□□□□ 0.58
PATJ-215	ENST00000635137	KCNH8	Q96L42	1107 aa		18.63	■□□□□ 0.57
PATJ-215	ENST00000635137	RIMBP3C	A6NJZ7	1639 aa		18.63	■□□□□ 0.57
PATJ-215	ENST00000635137	RIMBP3B	A6NNM3	1639 aa		18.63	■□□□□ 0.57
PATJ-215	ENST00000635137	RIMBP3	Q9UFD9	1639 aa		18.63	■□□□□ 0.57
PATJ-215	ENST00000635137	WDR7	Q9Y4E6	1490 aa		18.62	■□□□□ 0.57
PATJ-215	ENST00000635137	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	18.61	■□□□□ 0.57
PATJ-215	ENST00000635137	CAMSAP2	Q08AD1	1489 aa		18.6	■□□□□ 0.57
PATJ-215	ENST00000635137	PREX2	Q70Z35	1606 aa		18.6	■□□□□ 0.57
PATJ-215	ENST00000635137	ZNF777	Q9ULD5	760 aa	Predicted RBP	18.6	■□□□□ 0.57
PATJ-215	ENST00000635137	MYO5C	Q9NQX4	1742 aa		18.59	■□□□□ 0.57

Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms