RNA–Protein interactions for RNA: ENST00000633899.1

SF1-221, Transcript of splicing factor 1, humanhuman

TSL 4

Gene SF1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-221ENST00000633899 KIAA0586Q9BVV6 1533 aa35.12■■■■□ 3.21
SF1-221ENST00000633899 RAPGEF2Q9Y4G8 1499 aa35.11■■■■□ 3.21
SF1-221ENST00000633899 JPH4Q96JJ6 628 aa35.11■■■■□ 3.21
SF1-221ENST00000633899 PRG4Q92954 1404 aaPredicted RBP35.08■■■■□ 3.21
SF1-221ENST00000633899 IQGAP2Q13576 1575 aa34.96■■■■□ 3.19
SF1-221ENST00000633899 CHIC1Q5VXU3 224 aa34.95■■■■□ 3.19
SF1-221ENST00000633899 EEA1Q15075 1411 aa34.93■■■■□ 3.18
SF1-221ENST00000633899 PRXQ9BXM0 1461 aa34.9■■■■□ 3.18
SF1-221ENST00000633899 CTTNBP2Q8WZ74 1663 aa34.89■■■■□ 3.18
SF1-221ENST00000633899 CSRNP3Q8WYN3 585 aa34.87■■■■□ 3.17
SF1-221ENST00000633899 CARMIL2Q6F5E8 1435 aa34.81■■■■□ 3.16
SF1-221ENST00000633899 FAM9AQ8IZU1 332 aaPredicted RBP34.79■■■■□ 3.16
SF1-221ENST00000633899 UGGT2Q9NYU1 1516 aa34.72■■■■□ 3.15
SF1-221ENST00000633899 TRHP20396 242 aaPredicted RBP34.71■■■■□ 3.15
SF1-221ENST00000633899 TNIKQ9UKE5 1360 aa34.67■■■■□ 3.14
SF1-221ENST00000633899 TTBK1Q5TCY1 1321 aaPredicted RBP34.66■■■■□ 3.14
SF1-221ENST00000633899 PTPRGP23470 1445 aa34.65■■■■□ 3.14
SF1-221ENST00000633899 DISP1Q96F81 1524 aa34.65■■■■□ 3.14
SF1-221ENST00000633899 KIAA0556O60303 1618 aa34.63■■■■□ 3.13
SF1-221ENST00000633899 KIF21BO75037 1637 aa34.59■■■■□ 3.13
SF1-221ENST00000633899 ADCY10Q96PN6 1610 aa34.58■■■■□ 3.13
SF1-221ENST00000633899 GOLGA3Q08378 1498 aa34.58■■■■□ 3.13
SF1-221ENST00000633899 NPM1P06748 294 aaKnown RBP eCLIP34.56■■■■□ 3.12
SF1-221ENST00000633899 UACAQ9BZF9 1416 aa34.41■■■■□ 3.1
SF1-221ENST00000633899 MAPKBP1O60336 1514 aa34.38■■■■□ 3.09
SF1-221ENST00000633899 ABCC2Q92887 1545 aa34.38■■■■□ 3.09
SF1-221ENST00000633899 EHMT2Q96KQ7 1210 aa34.37■■■■□ 3.09
SF1-221ENST00000633899 UHRF1BP1LA0JNW5 1464 aa34.37■■■■□ 3.09
SF1-221ENST00000633899 SAMD9Q5K651 1589 aa34.34■■■■□ 3.09
SF1-221ENST00000633899 UBTFP17480 764 aaKnown RBP34.32■■■■□ 3.08
SF1-221ENST00000633899 RANGAP1P46060 587 aaPredicted RBP34.32■■■■□ 3.08
SF1-221ENST00000633899 P3H3Q8IVL6 736 aa34.31■■■■□ 3.08
SF1-221ENST00000633899 KIF13AQ9H1H9 1805 aa34.3■■■■□ 3.08
SF1-221ENST00000633899 PLB1Q6P1J6 1458 aa34.25■■■■□ 3.07
SF1-221ENST00000633899 ABCC10Q5T3U5 1492 aa34.22■■■■□ 3.07
SF1-221ENST00000633899 ABCA8O94911 1581 aa34.22■■■■□ 3.07
SF1-221ENST00000633899 ZCCHC11Q5TAX3 1644 aaKnown RBP34.21■■■■□ 3.07
SF1-221ENST00000633899 KDM5BQ9UGL1 1544 aa34.2■■■■□ 3.07
SF1-221ENST00000633899 EFCAB5A4FU69 1503 aa34.2■■■■□ 3.06
SF1-221ENST00000633899 DIP2BQ9P265 1576 aa34.19■■■■□ 3.06
SF1-221ENST00000633899 FAM69CQ0P6D2 419 aa34.17■■■■□ 3.06
SF1-221ENST00000633899 ASXL2Q76L83 1435 aa34.14■■■■□ 3.06
SF1-221ENST00000633899 FHOD3Q2V2M9 1422 aa34.13■■■■□ 3.05
SF1-221ENST00000633899 RAPGEF6Q8TEU7 1601 aa34.08■■■■□ 3.05
SF1-221ENST00000633899 TSPOAP1O95153 1857 aa34.01■■■■□ 3.04
SF1-221ENST00000633899 WDR7Q9Y4E6 1490 aa33.98■■■■□ 3.03
SF1-221ENST00000633899 ARID3CA6NKF2 412 aa33.97■■■■□ 3.03
SF1-221ENST00000633899 GLI2P10070 1586 aa33.97■■■■□ 3.03
SF1-221ENST00000633899 ARHGAP35Q9NRY4 1499 aa33.95■■■■□ 3.03
SF1-221ENST00000633899 EPRSP07814 1512 aaKnown RBP33.94■■■■□ 3.02
SF1-221ENST00000633899 ATP10BO94823 1461 aa33.91■■■■□ 3.02
SF1-221ENST00000633899 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.89■■■■□ 3.02
SF1-221ENST00000633899 HNRNPUL2Q1KMD3 747 aaKnown RBP33.89■■■■□ 3.02
SF1-221ENST00000633899 NUP153P49790 1475 aaKnown RBP33.88■■■■□ 3.01
SF1-221ENST00000633899 FMN1Q68DA7 1419 aa33.87■■■■□ 3.01
SF1-221ENST00000633899 MAP3K4Q9Y6R4 1608 aa33.83■■■■□ 3.01
SF1-221ENST00000633899 KCNH8Q96L42 1107 aa33.83■■■■□ 3.01
SF1-221ENST00000633899 PPRC1Q5VV67 1664 aaKnown RBP33.77■■■■□ 3
SF1-221ENST00000633899 HECW1Q76N89 1606 aa33.77■■■■□ 3
SF1-221ENST00000633899 CFAP43Q8NDM7 1665 aa33.77■■■■□ 3
SF1-221ENST00000633899 ATP1B4Q9UN42 357 aaPredicted RBP33.75■■■□□ 2.99
SF1-221ENST00000633899 CLIP1P30622 1438 aa33.74■■■□□ 2.99
SF1-221ENST00000633899 KDM6BO15054 1643 aa33.73■■■□□ 2.99
SF1-221ENST00000633899 TEX14Q8IWB6 1497 aa33.71■■■□□ 2.99
SF1-221ENST00000633899 CD109Q6YHK3 1445 aa33.67■■■□□ 2.98
SF1-221ENST00000633899 PLEKHD1A6NEE1 506 aa33.66■■■□□ 2.98
SF1-221ENST00000633899 CDK13Q14004 1512 aaKnown RBP33.66■■■□□ 2.98
SF1-221ENST00000633899 ABCA9Q8IUA7 1624 aa33.62■■■□□ 2.97
SF1-221ENST00000633899 PCF11O94913 1555 aaKnown RBP33.6■■■□□ 2.97
SF1-221ENST00000633899 MAGI3Q5TCQ9 1506 aa33.59■■■□□ 2.97
SF1-221ENST00000633899 CEP162Q5TB80 1403 aa33.55■■■□□ 2.96
SF1-221ENST00000633899 CASKIN1Q8WXD9 1431 aa33.55■■■□□ 2.96
SF1-221ENST00000633899 LRRIQ1Q96JM4 1722 aa33.54■■■□□ 2.96
SF1-221ENST00000633899 LOC105371045A0A1W2PR82 267 aa33.53■■■□□ 2.96
SF1-221ENST00000633899 CDK11AQ9UQ88 783 aaPredicted RBP33.53■■■□□ 2.96
SF1-221ENST00000633899 CCDC18Q5T9S5 1454 aa33.5■■■□□ 2.95
SF1-221ENST00000633899 FYCO1Q9BQS8 1478 aa33.5■■■□□ 2.95
SF1-221ENST00000633899 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.43■■■□□ 2.941e-8■■■■□ 19.9
SF1-221ENST00000633899 TTC37Q6PGP7 1564 aa33.41■■■□□ 2.94
SF1-221ENST00000633899 KIF14Q15058 1648 aa33.39■■■□□ 2.94
SF1-221ENST00000633899 COL17A1Q9UMD9 1497 aaPredicted RBP33.39■■■□□ 2.94
SF1-221ENST00000633899 TROQ12816 1431 aaPredicted RBP33.38■■■□□ 2.93
SF1-221ENST00000633899 NEO1Q92859 1461 aa33.35■■■□□ 2.93
SF1-221ENST00000633899 PHLDB1Q86UU1 1377 aa33.34■■■□□ 2.93
SF1-221ENST00000633899 CFAP74Q9C0B2 1584 aa33.33■■■□□ 2.93
SF1-221ENST00000633899 MYO5CQ9NQX4 1742 aa33.31■■■□□ 2.92
SF1-221ENST00000633899 ARAP3Q8WWN8 1544 aa33.3■■■□□ 2.92
SF1-221ENST00000633899 FANCAO15360 1455 aa33.26■■■□□ 2.92
SF1-221ENST00000633899 PLCH2O75038 1416 aa33.22■■■□□ 2.91
SF1-221ENST00000633899 AKNAQ7Z591 1439 aa33.2■■■□□ 2.91
SF1-221ENST00000633899 VPS8Q8N3P4 1428 aa33.16■■■□□ 2.9
SF1-221ENST00000633899 ARHGAP5Q13017 1502 aa33.14■■■□□ 2.9
SF1-221ENST00000633899 MTUS2Q5JR59 1369 aa33.13■■■□□ 2.89
SF1-221ENST00000633899 DENND4BO75064 1496 aaPredicted RBP33.12■■■□□ 2.89
SF1-221ENST00000633899 RAPGEF3O95398 923 aa33.12■■■□□ 2.89
SF1-221ENST00000633899 EFCAB2Q5VUJ9 269 aa33.12■■■□□ 2.89
SF1-221ENST00000633899 ADGRL1O94910 1474 aa33.11■■■□□ 2.89
SF1-221ENST00000633899 PREX2Q70Z35 1606 aa33.1■■■□□ 2.89
SF1-221ENST00000633899 CDC42BPBQ9Y5S2 1711 aa33.09■■■□□ 2.89
SF1-221ENST00000633899 FRMPD1Q5SYB0 1578 aa33.09■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms