RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 RUSC2Q8N2Y8 1516 aa35.99■■■■□ 3.35
TARDBP-228ENST00000629725 NPM1P06748 294 aaKnown RBP eCLIP35.93■■■■□ 3.34
TARDBP-228ENST00000629725 FAM69CQ0P6D2 419 aa35.92■■■■□ 3.34
TARDBP-228ENST00000629725 ABCC10Q5T3U5 1492 aa35.92■■■■□ 3.34
TARDBP-228ENST00000629725 MAPKBP1O60336 1514 aa35.88■■■■□ 3.33
TARDBP-228ENST00000629725 ADCY10Q96PN6 1610 aa35.83■■■■□ 3.33
TARDBP-228ENST00000629725 DIP2BQ9P265 1576 aa35.81■■■■□ 3.32
TARDBP-228ENST00000629725 KIAA0586Q9BVV6 1533 aa35.75■■■■□ 3.31
TARDBP-228ENST00000629725 IGF1RP08069 1367 aa35.68■■■■□ 3.3
TARDBP-228ENST00000629725 CUL7Q14999 1698 aa35.68■■■■□ 3.3
TARDBP-228ENST00000629725 KDM6BO15054 1643 aa35.66■■■■□ 3.3
TARDBP-228ENST00000629725 TSPOAP1O95153 1857 aa35.65■■■■□ 3.3
TARDBP-228ENST00000629725 KIF27Q86VH2 1401 aa35.64■■■■□ 3.3
TARDBP-228ENST00000629725 PTPRGP23470 1445 aa35.52■■■■□ 3.28
TARDBP-228ENST00000629725 KDM4FA0A1W2PPD8 638 aa35.51■■■■□ 3.28
TARDBP-228ENST00000629725 TTBK1Q5TCY1 1321 aaPredicted RBP35.46■■■■□ 3.27
TARDBP-228ENST00000629725 CARMIL1Q5VZK9 1371 aa35.44■■■■□ 3.26
TARDBP-228ENST00000629725 CARMIL2Q6F5E8 1435 aa35.43■■■■□ 3.26
TARDBP-228ENST00000629725 TNIKQ9UKE5 1360 aa35.41■■■■□ 3.26
TARDBP-228ENST00000629725 ABCC2Q92887 1545 aa35.41■■■■□ 3.26
TARDBP-228ENST00000629725 IQGAP2Q13576 1575 aa35.34■■■■□ 3.25
TARDBP-228ENST00000629725 ASXL2Q76L83 1435 aa35.34■■■■□ 3.25
TARDBP-228ENST00000629725 PLB1Q6P1J6 1458 aa35.33■■■■□ 3.25
TARDBP-228ENST00000629725 GLI2P10070 1586 aa35.3■■■■□ 3.24
TARDBP-228ENST00000629725 PPRC1Q5VV67 1664 aaKnown RBP35.3■■■■□ 3.24
TARDBP-228ENST00000629725 UHRF1BP1LA0JNW5 1464 aa35.28■■■■□ 3.24
TARDBP-228ENST00000629725 UACAQ9BZF9 1416 aa35.23■■■■□ 3.23
TARDBP-228ENST00000629725 DISP1Q96F81 1524 aa35.2■■■■□ 3.23
TARDBP-228ENST00000629725 EPRSP07814 1512 aaKnown RBP35.12■■■■□ 3.21
TARDBP-228ENST00000629725 KDM5BQ9UGL1 1544 aa35.12■■■■□ 3.21
TARDBP-228ENST00000629725 MAP3K4Q9Y6R4 1608 aa35.11■■■■□ 3.21
TARDBP-228ENST00000629725 ADGRL1O94910 1474 aa35.1■■■■□ 3.21
TARDBP-228ENST00000629725 UGGT2Q9NYU1 1516 aa35.09■■■■□ 3.21
TARDBP-228ENST00000629725 ZCCHC11Q5TAX3 1644 aaKnown RBP35.08■■■■□ 3.21
TARDBP-228ENST00000629725 COL17A1Q9UMD9 1497 aaPredicted RBP35.07■■■■□ 3.2
TARDBP-228ENST00000629725 RAPGEF2Q9Y4G8 1499 aa35.06■■■■□ 3.2
TARDBP-228ENST00000629725 TEX14Q8IWB6 1497 aa35.05■■■■□ 3.2
TARDBP-228ENST00000629725 KIAA0556O60303 1618 aa35.03■■■■□ 3.2
TARDBP-228ENST00000629725 ILDR1Q86SU0 546 aaPredicted RBP34.97■■■■□ 3.19
TARDBP-228ENST00000629725 WDR7Q9Y4E6 1490 aa34.91■■■■□ 3.18
TARDBP-228ENST00000629725 CTTNBP2Q8WZ74 1663 aa34.85■■■■□ 3.17
TARDBP-228ENST00000629725 HECW2Q9P2P5 1572 aa34.81■■■■□ 3.16
TARDBP-228ENST00000629725 CFAP43Q8NDM7 1665 aa34.78■■■■□ 3.16
TARDBP-228ENST00000629725 GOLGA3Q08378 1498 aa34.77■■■■□ 3.16
TARDBP-228ENST00000629725 CD109Q6YHK3 1445 aa34.76■■■■□ 3.16
TARDBP-228ENST00000629725 MAGI3Q5TCQ9 1506 aa34.75■■■■□ 3.15
TARDBP-228ENST00000629725 KCNH8Q96L42 1107 aa34.73■■■■□ 3.15
TARDBP-228ENST00000629725 ABCA8O94911 1581 aa34.73■■■■□ 3.15
TARDBP-228ENST00000629725 KIF21BO75037 1637 aa34.55■■■■□ 3.12
TARDBP-228ENST00000629725 PRXQ9BXM0 1461 aa34.55■■■■□ 3.12
TARDBP-228ENST00000629725 FAM9AQ8IZU1 332 aaPredicted RBP34.51■■■■□ 3.12
TARDBP-228ENST00000629725 ARAP3Q8WWN8 1544 aa34.5■■■■□ 3.11
TARDBP-228ENST00000629725 ARID3CA6NKF2 412 aa34.46■■■■□ 3.11
TARDBP-228ENST00000629725 ATP10BO94823 1461 aa34.45■■■■□ 3.1
TARDBP-228ENST00000629725 P3H3Q8IVL6 736 aa34.42■■■■□ 3.1
TARDBP-228ENST00000629725 ABCA9Q8IUA7 1624 aa34.4■■■■□ 3.1
TARDBP-228ENST00000629725 PHLDB1Q86UU1 1377 aa34.37■■■■□ 3.09
TARDBP-228ENST00000629725 ADAMTSL3P82987 1691 aa34.3■■■■□ 3.08
TARDBP-228ENST00000629725 SAMD9Q5K651 1589 aa34.28■■■■□ 3.08
TARDBP-228ENST00000629725 PTPRMP28827 1452 aa34.28■■■■□ 3.08
TARDBP-228ENST00000629725 RAPGEF3O95398 923 aa34.28■■■■□ 3.08
TARDBP-228ENST00000629725 RAPGEF6Q8TEU7 1601 aa34.28■■■■□ 3.08
TARDBP-228ENST00000629725 NEO1Q92859 1461 aa34.27■■■■□ 3.08
TARDBP-228ENST00000629725 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.24■■■■□ 3.07
TARDBP-228ENST00000629725 HNRNPUL2Q1KMD3 747 aaKnown RBP34.24■■■■□ 3.07
TARDBP-228ENST00000629725 BCORL1Q5H9F3 1711 aa34.18■■■■□ 3.06
TARDBP-228ENST00000629725 FBXO41Q8TF61 875 aa34.18■■■■□ 3.06
TARDBP-228ENST00000629725 FRMPD1Q5SYB0 1578 aa34.17■■■■□ 3.06
TARDBP-228ENST00000629725 CSRNP3Q8WYN3 585 aa34.16■■■■□ 3.06
TARDBP-228ENST00000629725 ARID4BQ4LE39 1312 aaPredicted RBP34.15■■■■□ 3.06
TARDBP-228ENST00000629725 NUP153P49790 1475 aaKnown RBP34.13■■■■□ 3.05
TARDBP-228ENST00000629725 MADDQ8WXG6 1647 aa34.12■■■■□ 3.05
TARDBP-228ENST00000629725 PCF11O94913 1555 aaKnown RBP34.06■■■■□ 3.04
TARDBP-228ENST00000629725 RANGAP1P46060 587 aaPredicted RBP34.04■■■■□ 3.04
TARDBP-228ENST00000629725 ARHGEF40Q8TER5 1519 aa34.04■■■■□ 3.04
TARDBP-228ENST00000629725 RICTORQ6R327 1708 aa34.03■■■■□ 3.04
TARDBP-228ENST00000629725 FHOD3Q2V2M9 1422 aa34.03■■■■□ 3.04
TARDBP-228ENST00000629725 PLEKHD1A6NEE1 506 aa34.02■■■■□ 3.04
TARDBP-228ENST00000629725 DENND4BO75064 1496 aaPredicted RBP34.01■■■■□ 3.04
TARDBP-228ENST00000629725 LMTK3Q96Q04 1460 aa34.01■■■■□ 3.03
TARDBP-228ENST00000629725 RIMS1Q86UR5 1692 aaKnown RBP33.99■■■■□ 3.03
TARDBP-228ENST00000629725 CFAP74Q9C0B2 1584 aa33.98■■■■□ 3.03
TARDBP-228ENST00000629725 AKNAQ7Z591 1439 aa33.98■■■■□ 3.03
TARDBP-228ENST00000629725 FANCAO15360 1455 aa33.96■■■■□ 3.03
TARDBP-228ENST00000629725 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.94■■■■□ 3.021e-7■■■■■ 34.9
TARDBP-228ENST00000629725 EEA1Q15075 1411 aa33.92■■■■□ 3.02
TARDBP-228ENST00000629725 POGZQ7Z3K3 1410 aa33.88■■■■□ 3.01
TARDBP-228ENST00000629725 TTC37Q6PGP7 1564 aa33.88■■■■□ 3.01
TARDBP-228ENST00000629725 ZMYM4Q5VZL5 1548 aa33.87■■■■□ 3.01
TARDBP-228ENST00000629725 EFCAB5A4FU69 1503 aa33.84■■■■□ 3.01
TARDBP-228ENST00000629725 ZFYVE16Q7Z3T8 1539 aa33.84■■■■□ 3.01
TARDBP-228ENST00000629725 PLPPR3Q6T4P5 718 aa33.83■■■■□ 3.01
TARDBP-228ENST00000629725 SIGLEC1Q9BZZ2 1709 aa33.82■■■■□ 3
TARDBP-228ENST00000629725 YEATS2Q9ULM3 1422 aa33.81■■■■□ 3
TARDBP-228ENST00000629725 MAGI2Q86UL8 1455 aa33.81■■■■□ 3
TARDBP-228ENST00000629725 HSPA2P54652 639 aa33.8■■■■□ 3
TARDBP-228ENST00000629725 HECW1Q76N89 1606 aa33.76■■■■□ 3
TARDBP-228ENST00000629725 CDK13Q14004 1512 aaKnown RBP33.75■■■□□ 2.99
TARDBP-228ENST00000629725 FER1L4A9Z1Z3 1794 aa33.75■■■□□ 2.99
TARDBP-228ENST00000629725 MLECQ14165 292 aa33.73■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms