RNA–Protein interactions for RNA: ENST00000629624.1

LEMD1-211, Transcript of LEM domain containing 1, humanhuman

TSL 4

Gene LEMD1, Length 576 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD1-211ENST00000629624 KIAA0586Q9BVV6 1533 aa16.64■□□□□ 0.25
LEMD1-211ENST00000629624 EFCAB5A4FU69 1503 aa16.61■□□□□ 0.25
LEMD1-211ENST00000629624 NUP160Q12769 1436 aa16.61■□□□□ 0.25
LEMD1-211ENST00000629624 CTTNBP2Q8WZ74 1663 aa16.6■□□□□ 0.25
LEMD1-211ENST00000629624 VPS8Q8N3P4 1428 aa16.6■□□□□ 0.25
LEMD1-211ENST00000629624 ARHGAP35Q9NRY4 1499 aa16.6■□□□□ 0.25
LEMD1-211ENST00000629624 IQGAP2Q13576 1575 aa16.56■□□□□ 0.24
LEMD1-211ENST00000629624 UGGT2Q9NYU1 1516 aa16.55■□□□□ 0.24
LEMD1-211ENST00000629624 ARAP1Q96P48 1450 aa16.54■□□□□ 0.24
LEMD1-211ENST00000629624 FBLN2P98095 1184 aa16.54■□□□□ 0.24
LEMD1-211ENST00000629624 SAMD9Q5K651 1589 aa16.51■□□□□ 0.23
LEMD1-211ENST00000629624 RANGAP1P46060 587 aaPredicted RBP16.5■□□□□ 0.23
LEMD1-211ENST00000629624 FMN1Q68DA7 1419 aa16.5■□□□□ 0.23
LEMD1-211ENST00000629624 CEP170Q5SW79 1584 aa16.48■□□□□ 0.23
LEMD1-211ENST00000629624 JPH4Q96JJ6 628 aa16.48■□□□□ 0.23
LEMD1-211ENST00000629624 APLP2Q06481 763 aa16.46■□□□□ 0.23
LEMD1-211ENST00000629624 CARMIL2Q6F5E8 1435 aa16.45■□□□□ 0.22
LEMD1-211ENST00000629624 MAP3K1Q13233 1512 aa16.44■□□□□ 0.22
LEMD1-211ENST00000629624 FHOD3Q2V2M9 1422 aa16.42■□□□□ 0.22
LEMD1-211ENST00000629624 CASKIN1Q8WXD9 1431 aa16.42■□□□□ 0.22
LEMD1-211ENST00000629624 DISP1Q96F81 1524 aa16.41■□□□□ 0.22
LEMD1-211ENST00000629624 FYCO1Q9BQS8 1478 aa16.4■□□□□ 0.22
LEMD1-211ENST00000629624 CHD1O14646 1710 aa16.39■□□□□ 0.21
LEMD1-211ENST00000629624 P3H3Q8IVL6 736 aa16.39■□□□□ 0.21
LEMD1-211ENST00000629624 TRIM26Q12899 539 aaPredicted RBP16.37■□□□□ 0.21
LEMD1-211ENST00000629624 KIAA0556O60303 1618 aa16.36■□□□□ 0.21
LEMD1-211ENST00000629624 CLASP1Q7Z460 1538 aa16.35■□□□□ 0.21
LEMD1-211ENST00000629624 OSCARQ8IYS5 282 aa16.34■□□□□ 0.21
LEMD1-211ENST00000629624 SHROOM2Q13796 1616 aa16.34■□□□□ 0.21
LEMD1-211ENST00000629624 PRG4Q92954 1404 aaPredicted RBP16.32■□□□□ 0.2
LEMD1-211ENST00000629624 CCDC18Q5T9S5 1454 aa16.28■□□□□ 0.2
LEMD1-211ENST00000629624 PCF11O94913 1555 aaKnown RBP16.27■□□□□ 0.2
LEMD1-211ENST00000629624 TIAM1Q13009 1591 aa16.26■□□□□ 0.19
LEMD1-211ENST00000629624 PTPRGP23470 1445 aa16.26■□□□□ 0.19
LEMD1-211ENST00000629624 HECW1Q76N89 1606 aa16.23■□□□□ 0.19
LEMD1-211ENST00000629624 LRRC9Q6ZRR7 1453 aa16.23■□□□□ 0.19
LEMD1-211ENST00000629624 KANK4Q5T7N3 995 aaPredicted RBP16.22■□□□□ 0.19
LEMD1-211ENST00000629624 ATP1B4Q9UN42 357 aaPredicted RBP16.21■□□□□ 0.19
LEMD1-211ENST00000629624 CDK11AQ9UQ88 783 aaPredicted RBP16.21■□□□□ 0.19
LEMD1-211ENST00000629624 CFAP43Q8NDM7 1665 aa16.2■□□□□ 0.18
LEMD1-211ENST00000629624 EPRSP07814 1512 aaKnown RBP16.19■□□□□ 0.18
LEMD1-211ENST00000629624 RAPGEF6Q8TEU7 1601 aa16.19■□□□□ 0.18
LEMD1-211ENST00000629624 ABCA8O94911 1581 aa16.18■□□□□ 0.18
LEMD1-211ENST00000629624 NUP153P49790 1475 aaKnown RBP16.18■□□□□ 0.18
LEMD1-211ENST00000629624 PPARGC1BQ86YN6 1023 aaKnown RBP16.18■□□□□ 0.18
LEMD1-211ENST00000629624 PCGF6Q9BYE7 350 aa16.17■□□□□ 0.18
LEMD1-211ENST00000629624 MTUS2Q5JR59 1369 aa16.16■□□□□ 0.18
LEMD1-211ENST00000629624 UACAQ9BZF9 1416 aa16.16■□□□□ 0.18
LEMD1-211ENST00000629624 PLB1Q6P1J6 1458 aa16.15■□□□□ 0.18
LEMD1-211ENST00000629624 UHRF1BP1LA0JNW5 1464 aa16.14■□□□□ 0.17
LEMD1-211ENST00000629624 EHBP1L1Q8N3D4 1523 aa16.12■□□□□ 0.17
LEMD1-211ENST00000629624 RRBP1Q9P2E9 1410 aaKnown RBP16.11■□□□□ 0.17
LEMD1-211ENST00000629624 ERCC6L2Q5T890 1561 aa16.09■□□□□ 0.17
LEMD1-211ENST00000629624 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.09■□□□□ 0.177e-10■■■■■ 76.2
LEMD1-211ENST00000629624 ATP10BO94823 1461 aa16.09■□□□□ 0.17
LEMD1-211ENST00000629624 ABCC2Q92887 1545 aa16.09■□□□□ 0.17
LEMD1-211ENST00000629624 PLEKHD1A6NEE1 506 aa16.08■□□□□ 0.16
LEMD1-211ENST00000629624 TTBK1Q5TCY1 1321 aaPredicted RBP16.08■□□□□ 0.16
LEMD1-211ENST00000629624 TROQ12816 1431 aaPredicted RBP16.07■□□□□ 0.16
LEMD1-211ENST00000629624 LRRIQ1Q96JM4 1722 aa16.07■□□□□ 0.16
LEMD1-211ENST00000629624 ARHGEF11O15085 1522 aa16.06■□□□□ 0.16
LEMD1-211ENST00000629624 CDK13Q14004 1512 aaKnown RBP16.06■□□□□ 0.16
LEMD1-211ENST00000629624 CCNB3Q8WWL7 1395 aa16.04■□□□□ 0.16
LEMD1-211ENST00000629624 NCOA2Q15596 1464 aa16.03■□□□□ 0.16
LEMD1-211ENST00000629624 PHLDB1Q86UU1 1377 aa16.03■□□□□ 0.16
LEMD1-211ENST00000629624 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.03■□□□□ 0.16
LEMD1-211ENST00000629624 HNRNPUL2Q1KMD3 747 aaKnown RBP16.03■□□□□ 0.16
LEMD1-211ENST00000629624 KDM5BQ9UGL1 1544 aa16.03■□□□□ 0.16
LEMD1-211ENST00000629624 SUPT6HQ7KZ85 1726 aaKnown RBP16.02■□□□□ 0.16
LEMD1-211ENST00000629624 MAGI3Q5TCQ9 1506 aa16.02■□□□□ 0.15
LEMD1-211ENST00000629624 MYOM3Q5VTT5 1437 aa16.01■□□□□ 0.15
LEMD1-211ENST00000629624 MIA2Q96PC5 1412 aa16.01■□□□□ 0.15
LEMD1-211ENST00000629624 FGD6Q6ZV73 1430 aa15.98■□□□□ 0.15
LEMD1-211ENST00000629624 ARID3CA6NKF2 412 aa15.96■□□□□ 0.15
LEMD1-211ENST00000629624 ADCY10Q96PN6 1610 aa15.96■□□□□ 0.15
LEMD1-211ENST00000629624 NPM1P06748 294 aaKnown RBP eCLIP15.92■□□□□ 0.14
LEMD1-211ENST00000629624 TCOF1Q13428 1488 aaKnown RBP15.91■□□□□ 0.14
LEMD1-211ENST00000629624 ABCC10Q5T3U5 1492 aa15.91■□□□□ 0.14
LEMD1-211ENST00000629624 KIF14Q15058 1648 aa15.9■□□□□ 0.14
LEMD1-211ENST00000629624 GPATCH8Q9UKJ3 1502 aaKnown RBP15.89■□□□□ 0.13
LEMD1-211ENST00000629624 ZCCHC11Q5TAX3 1644 aaKnown RBP15.88■□□□□ 0.13
LEMD1-211ENST00000629624 HRCP23327 699 aa15.87■□□□□ 0.13
LEMD1-211ENST00000629624 FAM50AQ14320 339 aaKnown RBP15.87■□□□□ 0.13
LEMD1-211ENST00000629624 CFDP1Q9UEE9 299 aaPredicted RBP15.87■□□□□ 0.13
LEMD1-211ENST00000629624 WDR7Q9Y4E6 1490 aa15.84■□□□□ 0.13
LEMD1-211ENST00000629624 PTPN23Q9H3S7 1636 aa15.84■□□□□ 0.13
LEMD1-211ENST00000629624 ITSN2Q9NZM3 1697 aa15.83■□□□□ 0.13
LEMD1-211ENST00000629624 RSPH4AQ5TD94 716 aa15.83■□□□□ 0.12
LEMD1-211ENST00000629624 ACIN1Q9UKV3 1341 aaKnown RBP15.83■□□□□ 0.12
LEMD1-211ENST00000629624 RIMBP3CA6NJZ7 1639 aa15.83■□□□□ 0.12
LEMD1-211ENST00000629624 RIMBP3BA6NNM3 1639 aa15.83■□□□□ 0.12
LEMD1-211ENST00000629624 RIMBP3Q9UFD9 1639 aa15.83■□□□□ 0.12
LEMD1-211ENST00000629624 CYB5RLQ6IPT4 315 aa15.81■□□□□ 0.12
LEMD1-211ENST00000629624 ASXL2Q76L83 1435 aa15.81■□□□□ 0.12
LEMD1-211ENST00000629624 ARAP3Q8WWN8 1544 aa15.81■□□□□ 0.12
LEMD1-211ENST00000629624 PLCH2O75038 1416 aa15.79■□□□□ 0.12
LEMD1-211ENST00000629624 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.78■□□□□ 0.12
LEMD1-211ENST00000629624 AKNAQ7Z591 1439 aa15.78■□□□□ 0.12
LEMD1-211ENST00000629624 KCNH8Q96L42 1107 aa15.78■□□□□ 0.12
LEMD1-211ENST00000629624 PLEKHH2Q8IVE3 1493 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms