RNA–Protein interactions for RNA: ENST00000629624.1

LEMD1-211, Transcript of LEM domain containing 1, humanhuman

TSL 4

Gene LEMD1, Length 576 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD1-211ENST00000629624 NISCHQ9Y2I1 1504 aa24.2■■□□□ 1.46
LEMD1-211ENST00000629624 CCDC180Q9P1Z9 1646 aa21.18■□□□□ 0.98
LEMD1-211ENST00000629624 ZCCHC6Q5VYS8 1495 aaKnown RBP20.29■□□□□ 0.84
LEMD1-211ENST00000629624 DCAF1Q9Y4B6 1507 aa20.15■□□□□ 0.82
LEMD1-211ENST00000629624 MYO15BQ96JP2 1530 aa20.02■□□□□ 0.79
LEMD1-211ENST00000629624 ABCC9O60706 1549 aa20■□□□□ 0.79
LEMD1-211ENST00000629624 DCAF8L2P0C7V8 631 aa19.88■□□□□ 0.77
LEMD1-211ENST00000629624 NACADO15069 1562 aa19.82■□□□□ 0.76
LEMD1-211ENST00000629624 RB1CC1Q8TDY2 1594 aa19.62■□□□□ 0.73
LEMD1-211ENST00000629624 SHROOM4Q9ULL8 1493 aa19.39■□□□□ 0.69
LEMD1-211ENST00000629624 SCRIBQ14160 1630 aa19.27■□□□□ 0.68
LEMD1-211ENST00000629624 UNC13AQ9UPW8 1703 aa19.01■□□□□ 0.63
LEMD1-211ENST00000629624 BICRAQ9NZM4 1560 aa18.95■□□□□ 0.62
LEMD1-211ENST00000629624 PABPN1Q86U42 306 aaKnown RBP eCLIP18.83■□□□□ 0.6
LEMD1-211ENST00000629624 BAZ1AQ9NRL2 1556 aaPredicted RBP18.72■□□□□ 0.59
LEMD1-211ENST00000629624 CECR2Q9BXF3 1484 aa18.71■□□□□ 0.59
LEMD1-211ENST00000629624 RSF1Q96T23 1441 aaPredicted RBP18.71■□□□□ 0.59
LEMD1-211ENST00000629624 SUPT5HO00267 1087 aaKnown RBP18.68■□□□□ 0.58
LEMD1-211ENST00000629624 MROH2BQ7Z745 1585 aa18.6■□□□□ 0.57
LEMD1-211ENST00000629624 SMARCA4P51532 1647 aa18.57■□□□□ 0.56
LEMD1-211ENST00000629624 PEG3Q9GZU2 1588 aa18.47■□□□□ 0.55
LEMD1-211ENST00000629624 EIF4G1Q04637 1599 aaKnown RBP18.41■□□□□ 0.54
LEMD1-211ENST00000629624 SMARCA2P51531 1590 aa18.39■□□□□ 0.53
LEMD1-211ENST00000629624 ATAD2BQ9ULI0 1458 aa18.37■□□□□ 0.53
LEMD1-211ENST00000629624 WIZO95785 1651 aa18.37■□□□□ 0.53
LEMD1-211ENST00000629624 NCAPD3P42695 1498 aa18.32■□□□□ 0.52
LEMD1-211ENST00000629624 TOP2AP11388 1531 aaKnown RBP18.31■□□□□ 0.52
LEMD1-211ENST00000629624 DNAJC5BQ9UF47 199 aa18.28■□□□□ 0.52
LEMD1-211ENST00000629624 HMGXB3Q12766 1538 aa18.23■□□□□ 0.51
LEMD1-211ENST00000629624 BAZ1BQ9UIG0 1483 aaKnown RBP18.22■□□□□ 0.51
LEMD1-211ENST00000629624 CC2D2AQ9P2K1 1620 aa18.13■□□□□ 0.49
LEMD1-211ENST00000629624 CCDC88BA6NC98 1476 aa18.1■□□□□ 0.49
LEMD1-211ENST00000629624 CHIC1Q5VXU3 224 aa17.91■□□□□ 0.46
LEMD1-211ENST00000629624 CFTRP13569 1480 aa17.82■□□□□ 0.44
LEMD1-211ENST00000629624 CADPSQ9ULU8 1353 aa17.8■□□□□ 0.44
LEMD1-211ENST00000629624 TRIM41Q8WV44 630 aa17.69■□□□□ 0.42
LEMD1-211ENST00000629624 LAMC3Q9Y6N6 1575 aa17.65■□□□□ 0.42
LEMD1-211ENST00000629624 WRNQ14191 1432 aaPredicted RBP eCLIP17.61■□□□□ 0.41
LEMD1-211ENST00000629624 PRDM2Q13029 1718 aa17.58■□□□□ 0.41
LEMD1-211ENST00000629624 PDS5BQ9NTI5 1447 aa17.57■□□□□ 0.4
LEMD1-211ENST00000629624 ABCC8Q09428 1581 aa17.53■□□□□ 0.4
LEMD1-211ENST00000629624 FANCD2Q9BXW9 1451 aa17.53■□□□□ 0.4
LEMD1-211ENST00000629624 NESP48681 1621 aa17.5■□□□□ 0.39
LEMD1-211ENST00000629624 TOP2BQ02880 1626 aa17.47■□□□□ 0.39
LEMD1-211ENST00000629624 CEP164Q9UPV0 1460 aa17.44■□□□□ 0.38
LEMD1-211ENST00000629624 SYNJ1O43426 1573 aa17.43■□□□□ 0.38
LEMD1-211ENST00000629624 BIVM-ERCC5R4GMW8 1640 aa17.43■□□□□ 0.38
LEMD1-211ENST00000629624 EEA1Q15075 1411 aa17.41■□□□□ 0.38
LEMD1-211ENST00000629624 CUX1P39880 1505 aa17.41■□□□□ 0.38
LEMD1-211ENST00000629624 DNMBPQ6XZF7 1577 aa17.35■□□□□ 0.37
LEMD1-211ENST00000629624 TOPBP1Q92547 1522 aa17.31■□□□□ 0.36
LEMD1-211ENST00000629624 URB2Q14146 1524 aaKnown RBP17.28■□□□□ 0.36
LEMD1-211ENST00000629624 MRC2Q9UBG0 1479 aa17.28■□□□□ 0.36
LEMD1-211ENST00000629624 SOGA1O94964 1423 aa17.26■□□□□ 0.35
LEMD1-211ENST00000629624 CSRNP3Q8WYN3 585 aa17.25■□□□□ 0.35
LEMD1-211ENST00000629624 KIF21AQ7Z4S6 1674 aa17.25■□□□□ 0.35
LEMD1-211ENST00000629624 FGD5Q6ZNL6 1462 aa17.24■□□□□ 0.35
LEMD1-211ENST00000629624 ERCC6Q03468 1493 aa17.23■□□□□ 0.35
LEMD1-211ENST00000629624 KIF27Q86VH2 1401 aa17.22■□□□□ 0.35
LEMD1-211ENST00000629624 POLA1P09884 1462 aaPredicted RBP17.22■□□□□ 0.35
LEMD1-211ENST00000629624 WDR62O43379 1518 aa17.19■□□□□ 0.34
LEMD1-211ENST00000629624 ABCA10Q8WWZ4 1543 aa17.19■□□□□ 0.34
LEMD1-211ENST00000629624 FAM9AQ8IZU1 332 aaPredicted RBP17.18■□□□□ 0.34
LEMD1-211ENST00000629624 RUSC2Q8N2Y8 1516 aa17.14■□□□□ 0.33
LEMD1-211ENST00000629624 CUX2O14529 1486 aa17.12■□□□□ 0.33
LEMD1-211ENST00000629624 LOC105371045A0A1W2PR82 267 aa17.1■□□□□ 0.33
LEMD1-211ENST00000629624 DNAJC5Q9H3Z4 198 aa17.09■□□□□ 0.33
LEMD1-211ENST00000629624 IGF1RP08069 1367 aa17.09■□□□□ 0.33
LEMD1-211ENST00000629624 IFT140Q96RY7 1462 aa17.09■□□□□ 0.33
LEMD1-211ENST00000629624 RAD54L2Q9Y4B4 1467 aa17.09■□□□□ 0.33
LEMD1-211ENST00000629624 THOC2Q8NI27 1593 aaKnown RBP17.09■□□□□ 0.33
LEMD1-211ENST00000629624 PRXQ9BXM0 1461 aa17.06■□□□□ 0.32
LEMD1-211ENST00000629624 WDR97A6NE52 1622 aa17.05■□□□□ 0.32
LEMD1-211ENST00000629624 KIF21BO75037 1637 aa17.05■□□□□ 0.32
LEMD1-211ENST00000629624 TARBP1Q13395 1621 aaKnown RBP17.05■□□□□ 0.32
LEMD1-211ENST00000629624 GOLGA3Q08378 1498 aa17.04■□□□□ 0.32
LEMD1-211ENST00000629624 ERICH3Q5RHP9 1530 aa17.02■□□□□ 0.32
LEMD1-211ENST00000629624 TNIKQ9UKE5 1360 aa17.02■□□□□ 0.31
LEMD1-211ENST00000629624 GAPVD1Q14C86 1478 aa16.99■□□□□ 0.31
LEMD1-211ENST00000629624 CARMIL1Q5VZK9 1371 aa16.99■□□□□ 0.31
LEMD1-211ENST00000629624 ABCA5Q8WWZ7 1642 aa16.98■□□□□ 0.31
LEMD1-211ENST00000629624 TDRD9Q8NDG6 1382 aaKnown RBP16.98■□□□□ 0.31
LEMD1-211ENST00000629624 RAPGEF2Q9Y4G8 1499 aa16.94■□□□□ 0.3
LEMD1-211ENST00000629624 UBTFP17480 764 aaKnown RBP16.93■□□□□ 0.3
LEMD1-211ENST00000629624 GRIN2BQ13224 1484 aa16.93■□□□□ 0.3
LEMD1-211ENST00000629624 CUL7Q14999 1698 aa16.91■□□□□ 0.3
LEMD1-211ENST00000629624 AQRO60306 1485 aaKnown RBP eCLIP16.88■□□□□ 0.29
LEMD1-211ENST00000629624 FHAD1B1AJZ9 1412 aa16.87■□□□□ 0.29
LEMD1-211ENST00000629624 ZNF608Q9ULD9 1512 aaPredicted RBP16.86■□□□□ 0.29
LEMD1-211ENST00000629624 MAGI1Q96QZ7 1491 aaPredicted RBP16.81■□□□□ 0.28
LEMD1-211ENST00000629624 CEP162Q5TB80 1403 aa16.81■□□□□ 0.28
LEMD1-211ENST00000629624 EHMT2Q96KQ7 1210 aa16.8■□□□□ 0.28
LEMD1-211ENST00000629624 EIF4G3O43432 1585 aaKnown RBP16.79■□□□□ 0.28
LEMD1-211ENST00000629624 PBRM1Q86U86 1689 aa16.77■□□□□ 0.28
LEMD1-211ENST00000629624 CLIP1P30622 1438 aa16.75■□□□□ 0.27
LEMD1-211ENST00000629624 ADAMTS12P58397 1594 aa16.75■□□□□ 0.27
LEMD1-211ENST00000629624 SNAPC4Q5SXM2 1469 aa16.73■□□□□ 0.27
LEMD1-211ENST00000629624 SYNJ2O15056 1496 aa16.72■□□□□ 0.27
LEMD1-211ENST00000629624 CHMP7Q8WUX9 453 aaPredicted RBP16.68■□□□□ 0.26
LEMD1-211ENST00000629624 GRIN2AQ12879 1464 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms