RNA–Protein interactions for RNA: ENST00000627368.2

DCTN4-215, Transcript of dynactin subunit 4, humanhuman

TSL 5 BASIC

Gene DCTN4, Length 1,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCTN4-215ENST00000627368 EFCAB5A4FU69 1503 aa15.33■□□□□ 0.04
DCTN4-215ENST00000627368 FHOD3Q2V2M9 1422 aa15.33■□□□□ 0.04
DCTN4-215ENST00000627368 AQRO60306 1485 aaKnown RBP eCLIP15.32■□□□□ 0.048e-7■■■■□ 19.5
DCTN4-215ENST00000627368 WDR62O43379 1518 aa15.31■□□□□ 0.04
DCTN4-215ENST00000627368 MAP3K1Q13233 1512 aa15.31■□□□□ 0.04
DCTN4-215ENST00000627368 IFT140Q96RY7 1462 aa15.29■□□□□ 0.04
DCTN4-215ENST00000627368 TIAM1Q13009 1591 aa15.29■□□□□ 0.04
DCTN4-215ENST00000627368 RRBP1Q9P2E9 1410 aaKnown RBP15.28■□□□□ 0.04
DCTN4-215ENST00000627368 CTTNBP2Q8WZ74 1663 aa15.28■□□□□ 0.04
DCTN4-215ENST00000627368 PCF11O94913 1555 aaKnown RBP15.28■□□□□ 0.04
DCTN4-215ENST00000627368 ERCC6Q03468 1493 aa15.27■□□□□ 0.03
DCTN4-215ENST00000627368 GRIN2BQ13224 1484 aa15.26■□□□□ 0.03
DCTN4-215ENST00000627368 ZNF608Q9ULD9 1512 aaPredicted RBP15.25■□□□□ 0.03
DCTN4-215ENST00000627368 LRRC9Q6ZRR7 1453 aa15.25■□□□□ 0.03
DCTN4-215ENST00000627368 CASKIN1Q8WXD9 1431 aa15.24■□□□□ 0.03
DCTN4-215ENST00000627368 FYCO1Q9BQS8 1478 aa15.24■□□□□ 0.03
DCTN4-215ENST00000627368 ADAMTS12P58397 1594 aa15.24■□□□□ 0.03
DCTN4-215ENST00000627368 CCNB3Q8WWL7 1395 aa15.23■□□□□ 0.03
DCTN4-215ENST00000627368 ATP1B4Q9UN42 357 aaPredicted RBP15.23■□□□□ 0.03
DCTN4-215ENST00000627368 PBRM1Q86U86 1689 aa15.23■□□□□ 0.03
DCTN4-215ENST00000627368 FMN1Q68DA7 1419 aa15.23■□□□□ 0.03
DCTN4-215ENST00000627368 SAMD9Q5K651 1589 aa15.22■□□□□ 0.03
DCTN4-215ENST00000627368 CFAP43Q8NDM7 1665 aa15.19■□□□□ 0.02
DCTN4-215ENST00000627368 SNAPC4Q5SXM2 1469 aa15.19■□□□□ 0.02
DCTN4-215ENST00000627368 THOC2Q8NI27 1593 aaKnown RBP15.18■□□□□ 0.02
DCTN4-215ENST00000627368 PHLDB1Q86UU1 1377 aa15.17■□□□□ 0.02
DCTN4-215ENST00000627368 EIF4G3O43432 1585 aaKnown RBP15.14■□□□□ 0.01
DCTN4-215ENST00000627368 IQGAP2Q13576 1575 aa15.14■□□□□ 0.01
DCTN4-215ENST00000627368 ITGAEP38570 1179 aa15.11■□□□□ 0.01
DCTN4-215ENST00000627368 GRIN2AQ12879 1464 aa15.09■□□□□ 0.01
DCTN4-215ENST00000627368 DHX57Q6P158 1386 aaKnown RBP15.08■□□□□ 0
DCTN4-215ENST00000627368 KIAA0586Q9BVV6 1533 aa15.07■□□□□ 0
DCTN4-215ENST00000627368 UGGT2Q9NYU1 1516 aa15.07■□□□□ 0
DCTN4-215ENST00000627368 MTUS2Q5JR59 1369 aa15.07■□□□□ 0
DCTN4-215ENST00000627368 MAGI1Q96QZ7 1491 aaPredicted RBP15.07■□□□□ 0
DCTN4-215ENST00000627368 FAM50AQ14320 339 aaKnown RBP15.06■□□□□ 0
DCTN4-215ENST00000627368 CLSPNQ9HAW4 1339 aa15.03■□□□□ -0
DCTN4-215ENST00000627368 SYNJ2O15056 1496 aa15.03■□□□□ -0
DCTN4-215ENST00000627368 CHMP7Q8WUX9 453 aaPredicted RBP15.03■□□□□ -0
DCTN4-215ENST00000627368 CCDC18Q5T9S5 1454 aa15.01□□□□□ -0.01
DCTN4-215ENST00000627368 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.01□□□□□ -0.01
DCTN4-215ENST00000627368 DISP1Q96F81 1524 aa15.01□□□□□ -0.01
DCTN4-215ENST00000627368 FGD6Q6ZV73 1430 aa15.01□□□□□ -0.01
DCTN4-215ENST00000627368 RAB3GAP2Q9H2M9 1393 aa15.01□□□□□ -0.01
DCTN4-215ENST00000627368 LRRIQ1Q96JM4 1722 aa15□□□□□ -0.01
DCTN4-215ENST00000627368 EHBP1L1Q8N3D4 1523 aa15□□□□□ -0.01
DCTN4-215ENST00000627368 NCOA2Q15596 1464 aa15□□□□□ -0.01
DCTN4-215ENST00000627368 HECW1Q76N89 1606 aa14.99□□□□□ -0.01
DCTN4-215ENST00000627368 FBLN2P98095 1184 aa14.98□□□□□ -0.01
DCTN4-215ENST00000627368 SETD5Q9C0A6 1442 aa14.98□□□□□ -0.01
DCTN4-215ENST00000627368 KIAA0556O60303 1618 aa14.98□□□□□ -0.01
DCTN4-215ENST00000627368 EPRSP07814 1512 aaKnown RBP14.98□□□□□ -0.01
DCTN4-215ENST00000627368 MAGI3Q5TCQ9 1506 aa14.98□□□□□ -0.01
DCTN4-215ENST00000627368 CEP170Q5SW79 1584 aa14.97□□□□□ -0.01
DCTN4-215ENST00000627368 MYOM3Q5VTT5 1437 aa14.96□□□□□ -0.01
DCTN4-215ENST00000627368 NUP160Q12769 1436 aa14.96□□□□□ -0.02
DCTN4-215ENST00000627368 ARHGEF11O15085 1522 aa14.94□□□□□ -0.02
DCTN4-215ENST00000627368 CDK13Q14004 1512 aaKnown RBP14.94□□□□□ -0.02
DCTN4-215ENST00000627368 ARID3CA6NKF2 412 aa14.94□□□□□ -0.02
DCTN4-215ENST00000627368 ZNF316A6NFI3 1004 aaPredicted RBP14.93□□□□□ -0.02
DCTN4-215ENST00000627368 SUPT6HQ7KZ85 1726 aaKnown RBP14.92□□□□□ -0.02
DCTN4-215ENST00000627368 NUP153P49790 1475 aaKnown RBP14.9□□□□□ -0.02
DCTN4-215ENST00000627368 DIEXFQ68CQ4 756 aaKnown RBP14.9□□□□□ -0.02
DCTN4-215ENST00000627368 PTPRKQ15262 1439 aa14.89□□□□□ -0.03
DCTN4-215ENST00000627368 JPH4Q96JJ6 628 aa14.89□□□□□ -0.03
DCTN4-215ENST00000627368 MAPKBP1O60336 1514 aa14.88□□□□□ -0.03
DCTN4-215ENST00000627368 CARMIL2Q6F5E8 1435 aa14.87□□□□□ -0.03
DCTN4-215ENST00000627368 RAPGEF6Q8TEU7 1601 aa14.86□□□□□ -0.03
DCTN4-215ENST00000627368 TCOF1Q13428 1488 aaKnown RBP14.85□□□□□ -0.03
DCTN4-215ENST00000627368 PTPN23Q9H3S7 1636 aa14.85□□□□□ -0.03
DCTN4-215ENST00000627368 HFM1A2PYH4 1435 aa14.84□□□□□ -0.03
DCTN4-215ENST00000627368 PLB1Q6P1J6 1458 aa14.84□□□□□ -0.03
DCTN4-215ENST00000627368 MIA2Q96PC5 1412 aa14.83□□□□□ -0.04
DCTN4-215ENST00000627368 CDK11AQ9UQ88 783 aaPredicted RBP14.8□□□□□ -0.04
DCTN4-215ENST00000627368 NAIPQ13075 1403 aa14.8□□□□□ -0.04
DCTN4-215ENST00000627368 PRG4Q92954 1404 aaPredicted RBP14.78□□□□□ -0.04
DCTN4-215ENST00000627368 TROQ12816 1431 aaPredicted RBP14.78□□□□□ -0.04
DCTN4-215ENST00000627368 SIN3AQ96ST3 1273 aa14.75□□□□□ -0.05
DCTN4-215ENST00000627368 CHIC2Q9UKJ5 165 aa14.75□□□□□ -0.05
DCTN4-215ENST00000627368 UACAQ9BZF9 1416 aa14.74□□□□□ -0.05
DCTN4-215ENST00000627368 ABCA8O94911 1581 aa14.74□□□□□ -0.05
DCTN4-215ENST00000627368 AEBP2Q6ZN18 517 aaPredicted RBP14.74□□□□□ -0.05
DCTN4-215ENST00000627368 RRP7BPQ9NSQ0 103 aa14.74□□□□□ -0.05
DCTN4-215ENST00000627368 AKNAQ7Z591 1439 aa14.73□□□□□ -0.05
DCTN4-215ENST00000627368 NEUROD1Q13562 356 aa14.73□□□□□ -0.05
DCTN4-215ENST00000627368 ZNF644Q9H582 1327 aaPredicted RBP14.72□□□□□ -0.05
DCTN4-215ENST00000627368 PTPRGP23470 1445 aa14.71□□□□□ -0.05
DCTN4-215ENST00000627368 DAPK1P53355 1430 aa14.7□□□□□ -0.06
DCTN4-215ENST00000627368 ATP10BO94823 1461 aa14.7□□□□□ -0.06
DCTN4-215ENST00000627368 ABCC5O15440 1437 aa14.69□□□□□ -0.06
DCTN4-215ENST00000627368 CHD1O14646 1710 aa14.69□□□□□ -0.06
DCTN4-215ENST00000627368 GPATCH8Q9UKJ3 1502 aaKnown RBP14.68□□□□□ -0.06
DCTN4-215ENST00000627368 TIMELESSQ9UNS1 1208 aa14.68□□□□□ -0.06
DCTN4-215ENST00000627368 PLEKHD1A6NEE1 506 aa14.68□□□□□ -0.06
DCTN4-215ENST00000627368 CFDP1Q9UEE9 299 aaPredicted RBP14.68□□□□□ -0.06
DCTN4-215ENST00000627368 KIF14Q15058 1648 aa14.67□□□□□ -0.06
DCTN4-215ENST00000627368 ROCK1Q13464 1354 aa14.67□□□□□ -0.06
DCTN4-215ENST00000627368 ADCY10Q96PN6 1610 aa14.66□□□□□ -0.06
DCTN4-215ENST00000627368 GCC2Q8IWJ2 1684 aa14.65□□□□□ -0.06
DCTN4-215ENST00000627368 DNMT1P26358 1616 aaKnown RBP14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms