RNA–Protein interactions for RNA: ENST00000627368.2

DCTN4-215, Transcript of dynactin subunit 4, humanhuman

TSL 5 BASIC

Gene DCTN4, Length 1,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCTN4-215ENST00000627368 NISCHQ9Y2I1 1504 aa22.14■■□□□ 1.13
DCTN4-215ENST00000627368 CCDC180Q9P1Z9 1646 aa19.03■□□□□ 0.64
DCTN4-215ENST00000627368 ZCCHC6Q5VYS8 1495 aaKnown RBP18.66■□□□□ 0.58
DCTN4-215ENST00000627368 SHROOM4Q9ULL8 1493 aa18.43■□□□□ 0.54
DCTN4-215ENST00000627368 DCAF8L2P0C7V8 631 aa18.31■□□□□ 0.52
DCTN4-215ENST00000627368 DCAF1Q9Y4B6 1507 aa18.24■□□□□ 0.51
DCTN4-215ENST00000627368 SUPT5HO00267 1087 aaKnown RBP17.89■□□□□ 0.45
DCTN4-215ENST00000627368 MYO15BQ96JP2 1530 aa17.89■□□□□ 0.45
DCTN4-215ENST00000627368 ABCC9O60706 1549 aa17.88■□□□□ 0.45
DCTN4-215ENST00000627368 NACADO15069 1562 aa17.7■□□□□ 0.42
DCTN4-215ENST00000627368 SCRIBQ14160 1630 aa17.68■□□□□ 0.42
DCTN4-215ENST00000627368 RB1CC1Q8TDY2 1594 aa17.47■□□□□ 0.39
DCTN4-215ENST00000627368 RSF1Q96T23 1441 aaPredicted RBP17.35■□□□□ 0.37
DCTN4-215ENST00000627368 CHIC1Q5VXU3 224 aa17.26■□□□□ 0.35
DCTN4-215ENST00000627368 CECR2Q9BXF3 1484 aa17.24■□□□□ 0.35
DCTN4-215ENST00000627368 MROH2BQ7Z745 1585 aa17.15■□□□□ 0.34
DCTN4-215ENST00000627368 UNC13AQ9UPW8 1703 aa17.05■□□□□ 0.32
DCTN4-215ENST00000627368 BAZ1AQ9NRL2 1556 aaPredicted RBP17.04■□□□□ 0.32
DCTN4-215ENST00000627368 PABPN1Q86U42 306 aaKnown RBP eCLIP17■□□□□ 0.31
DCTN4-215ENST00000627368 BICRAQ9NZM4 1560 aa16.99■□□□□ 0.31
DCTN4-215ENST00000627368 WIZO95785 1651 aa16.98■□□□□ 0.31
DCTN4-215ENST00000627368 SMARCA4P51532 1647 aa16.92■□□□□ 0.3
DCTN4-215ENST00000627368 TOP2AP11388 1531 aaKnown RBP16.82■□□□□ 0.28
DCTN4-215ENST00000627368 TRIM41Q8WV44 630 aa16.75■□□□□ 0.27
DCTN4-215ENST00000627368 CCDC88BA6NC98 1476 aa16.7■□□□□ 0.26
DCTN4-215ENST00000627368 SMARCA2P51531 1590 aa16.68■□□□□ 0.26
DCTN4-215ENST00000627368 EIF4G1Q04637 1599 aaKnown RBP16.67■□□□□ 0.26
DCTN4-215ENST00000627368 PEG3Q9GZU2 1588 aa16.67■□□□□ 0.26
DCTN4-215ENST00000627368 LOC105371045A0A1W2PR82 267 aa16.66■□□□□ 0.26
DCTN4-215ENST00000627368 ATAD2BQ9ULI0 1458 aa16.61■□□□□ 0.25
DCTN4-215ENST00000627368 BAZ1BQ9UIG0 1483 aaKnown RBP16.53■□□□□ 0.24
DCTN4-215ENST00000627368 FAM9AQ8IZU1 332 aaPredicted RBP16.52■□□□□ 0.24
DCTN4-215ENST00000627368 ABCC8Q09428 1581 aa16.47■□□□□ 0.23
DCTN4-215ENST00000627368 NCAPD3P42695 1498 aa16.39■□□□□ 0.21
DCTN4-215ENST00000627368 HMGXB3Q12766 1538 aa16.35■□□□□ 0.21
DCTN4-215ENST00000627368 EHMT2Q96KQ7 1210 aa16.33■□□□□ 0.2
DCTN4-215ENST00000627368 WRNQ14191 1432 aaPredicted RBP eCLIP16.31■□□□□ 0.2
DCTN4-215ENST00000627368 SOGA1O94964 1423 aa16.26■□□□□ 0.19
DCTN4-215ENST00000627368 PCGF6Q9BYE7 350 aa16.24■□□□□ 0.19
DCTN4-215ENST00000627368 SYNJ1O43426 1573 aa16.21■□□□□ 0.19
DCTN4-215ENST00000627368 EEA1Q15075 1411 aa16.2■□□□□ 0.18
DCTN4-215ENST00000627368 RUSC2Q8N2Y8 1516 aa16.17■□□□□ 0.18
DCTN4-215ENST00000627368 CSRNP3Q8WYN3 585 aa16.15■□□□□ 0.18
DCTN4-215ENST00000627368 CFTRP13569 1480 aa16.13■□□□□ 0.17
DCTN4-215ENST00000627368 CC2D2AQ9P2K1 1620 aa16.11■□□□□ 0.17
DCTN4-215ENST00000627368 TRIM26Q12899 539 aaPredicted RBP16.1■□□□□ 0.17
DCTN4-215ENST00000627368 TOP2BQ02880 1626 aa16.07■□□□□ 0.16
DCTN4-215ENST00000627368 TNIKQ9UKE5 1360 aa16.05■□□□□ 0.16
DCTN4-215ENST00000627368 GOLGA3Q08378 1498 aa16.03■□□□□ 0.16
DCTN4-215ENST00000627368 CADPSQ9ULU8 1353 aa16.02■□□□□ 0.15
DCTN4-215ENST00000627368 HRCP23327 699 aa16.02■□□□□ 0.15
DCTN4-215ENST00000627368 BIVM-ERCC5R4GMW8 1640 aa16.02■□□□□ 0.15
DCTN4-215ENST00000627368 CEP162Q5TB80 1403 aa16.02■□□□□ 0.15
DCTN4-215ENST00000627368 CUX1P39880 1505 aa16.01■□□□□ 0.15
DCTN4-215ENST00000627368 UBTFP17480 764 aaKnown RBP16■□□□□ 0.15
DCTN4-215ENST00000627368 CEP164Q9UPV0 1460 aa15.99■□□□□ 0.15
DCTN4-215ENST00000627368 KIF21BO75037 1637 aa15.95■□□□□ 0.14
DCTN4-215ENST00000627368 RAPGEF2Q9Y4G8 1499 aa15.9■□□□□ 0.14
DCTN4-215ENST00000627368 PPARGC1BQ86YN6 1023 aaKnown RBP15.89■□□□□ 0.13
DCTN4-215ENST00000627368 PRDM2Q13029 1718 aa15.87■□□□□ 0.13
DCTN4-215ENST00000627368 KIF27Q86VH2 1401 aa15.86■□□□□ 0.13
DCTN4-215ENST00000627368 FANCD2Q9BXW9 1451 aa15.85■□□□□ 0.13
DCTN4-215ENST00000627368 PRXQ9BXM0 1461 aa15.84■□□□□ 0.13
DCTN4-215ENST00000627368 CLIP1P30622 1438 aa15.82■□□□□ 0.12
DCTN4-215ENST00000627368 NESP48681 1621 aa15.8■□□□□ 0.12
DCTN4-215ENST00000627368 FGD5Q6ZNL6 1462 aa15.79■□□□□ 0.12
DCTN4-215ENST00000627368 ERICH3Q5RHP9 1530 aa15.79■□□□□ 0.12
DCTN4-215ENST00000627368 DNAJC5BQ9UF47 199 aa15.77■□□□□ 0.11
DCTN4-215ENST00000627368 CUX2O14529 1486 aa15.77■□□□□ 0.11
DCTN4-215ENST00000627368 LAMC3Q9Y6N6 1575 aa15.72■□□□□ 0.11
DCTN4-215ENST00000627368 IGF1RP08069 1367 aa15.71■□□□□ 0.11
DCTN4-215ENST00000627368 DNMBPQ6XZF7 1577 aa15.71■□□□□ 0.11
DCTN4-215ENST00000627368 TTBK1Q5TCY1 1321 aaPredicted RBP15.71■□□□□ 0.11
DCTN4-215ENST00000627368 RANGAP1P46060 587 aaPredicted RBP15.71■□□□□ 0.11
DCTN4-215ENST00000627368 VPS8Q8N3P4 1428 aa15.7■□□□□ 0.1
DCTN4-215ENST00000627368 TOPBP1Q92547 1522 aa15.7■□□□□ 0.1
DCTN4-215ENST00000627368 POLA1P09884 1462 aaPredicted RBP15.66■□□□□ 0.1
DCTN4-215ENST00000627368 PDS5BQ9NTI5 1447 aa15.65■□□□□ 0.1
DCTN4-215ENST00000627368 RAD54L2Q9Y4B4 1467 aa15.65■□□□□ 0.1
DCTN4-215ENST00000627368 URB2Q14146 1524 aaKnown RBP15.63■□□□□ 0.09
DCTN4-215ENST00000627368 ABCA10Q8WWZ4 1543 aa15.63■□□□□ 0.09
DCTN4-215ENST00000627368 CARMIL1Q5VZK9 1371 aa15.63■□□□□ 0.09
DCTN4-215ENST00000627368 ARAP1Q96P48 1450 aa15.61■□□□□ 0.09
DCTN4-215ENST00000627368 ZEB1P37275 1124 aaPredicted RBP15.59■□□□□ 0.09
DCTN4-215ENST00000627368 APLP2Q06481 763 aa15.56■□□□□ 0.08
DCTN4-215ENST00000627368 ARHGAP35Q9NRY4 1499 aa15.54■□□□□ 0.08
DCTN4-215ENST00000627368 KIF21AQ7Z4S6 1674 aa15.5■□□□□ 0.07
DCTN4-215ENST00000627368 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.49■□□□□ 0.07
DCTN4-215ENST00000627368 TDRD9Q8NDG6 1382 aaKnown RBP15.49■□□□□ 0.07
DCTN4-215ENST00000627368 WDR97A6NE52 1622 aa15.47■□□□□ 0.07
DCTN4-215ENST00000627368 ABCA5Q8WWZ7 1642 aa15.44■□□□□ 0.06
DCTN4-215ENST00000627368 CUL7Q14999 1698 aa15.44■□□□□ 0.06
DCTN4-215ENST00000627368 CCER1Q8TC90 406 aaPredicted RBP15.44■□□□□ 0.06
DCTN4-215ENST00000627368 GAPVD1Q14C86 1478 aa15.44■□□□□ 0.06
DCTN4-215ENST00000627368 MRC2Q9UBG0 1479 aa15.44■□□□□ 0.06
DCTN4-215ENST00000627368 KANK4Q5T7N3 995 aaPredicted RBP15.42■□□□□ 0.06
DCTN4-215ENST00000627368 TARBP1Q13395 1621 aaKnown RBP15.4■□□□□ 0.06
DCTN4-215ENST00000627368 HNRNPUL2Q1KMD3 747 aaKnown RBP15.37■□□□□ 0.05
DCTN4-215ENST00000627368 P3H3Q8IVL6 736 aa15.35■□□□□ 0.05
DCTN4-215ENST00000627368 FHAD1B1AJZ9 1412 aa15.33■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms