RNA–Protein interactions for RNA: ENST00000620789.4

LITAF-220, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-220ENST00000620789 KIAA0586Q9BVV6 1533 aa30.58■■■□□ 2.49
LITAF-220ENST00000620789 PRXQ9BXM0 1461 aa30.58■■■□□ 2.49
LITAF-220ENST00000620789 CSRNP3Q8WYN3 585 aa30.56■■■□□ 2.48
LITAF-220ENST00000620789 ARAP1Q96P48 1450 aa30.53■■■□□ 2.48
LITAF-220ENST00000620789 JPH4Q96JJ6 628 aa30.5■■■□□ 2.47
LITAF-220ENST00000620789 ERCC6L2Q5T890 1561 aa30.49■■■□□ 2.47
LITAF-220ENST00000620789 FAM9AQ8IZU1 332 aaPredicted RBP30.47■■■□□ 2.47
LITAF-220ENST00000620789 PRG4Q92954 1404 aaPredicted RBP30.46■■■□□ 2.47
LITAF-220ENST00000620789 CYB5RLQ6IPT4 315 aa30.44■■■□□ 2.46
LITAF-220ENST00000620789 IQGAP2Q13576 1575 aa30.44■■■□□ 2.46
LITAF-220ENST00000620789 CTTNBP2Q8WZ74 1663 aa30.38■■■□□ 2.45
LITAF-220ENST00000620789 KIF21BO75037 1637 aa30.33■■■□□ 2.45
LITAF-220ENST00000620789 UGGT2Q9NYU1 1516 aa30.27■■■□□ 2.44
LITAF-220ENST00000620789 CARMIL2Q6F5E8 1435 aa30.24■■■□□ 2.43
LITAF-220ENST00000620789 DISP1Q96F81 1524 aa30.21■■■□□ 2.43
LITAF-220ENST00000620789 KIAA0556O60303 1618 aa30.14■■■□□ 2.42
LITAF-220ENST00000620789 GOLGA3Q08378 1498 aa30.14■■■□□ 2.42
LITAF-220ENST00000620789 TNIKQ9UKE5 1360 aa30.14■■■□□ 2.41
LITAF-220ENST00000620789 PTPRGP23470 1445 aa30.1■■■□□ 2.41
LITAF-220ENST00000620789 EHMT2Q96KQ7 1210 aa30.05■■■□□ 2.4
LITAF-220ENST00000620789 TTBK1Q5TCY1 1321 aaPredicted RBP30.02■■■□□ 2.4
LITAF-220ENST00000620789 UBTFP17480 764 aaKnown RBP30.02■■■□□ 2.4
LITAF-220ENST00000620789 SAMD9Q5K651 1589 aa30■■■□□ 2.39
LITAF-220ENST00000620789 ADCY10Q96PN6 1610 aa30■■■□□ 2.39
LITAF-220ENST00000620789 UACAQ9BZF9 1416 aa29.91■■■□□ 2.38
LITAF-220ENST00000620789 RANGAP1P46060 587 aaPredicted RBP29.91■■■□□ 2.38
LITAF-220ENST00000620789 UHRF1BP1LA0JNW5 1464 aa29.9■■■□□ 2.38
LITAF-220ENST00000620789 P3H3Q8IVL6 736 aa29.89■■■□□ 2.38
LITAF-220ENST00000620789 EFCAB5A4FU69 1503 aa29.88■■■□□ 2.37
LITAF-220ENST00000620789 ABCC2Q92887 1545 aa29.87■■■□□ 2.37
LITAF-220ENST00000620789 NPM1P06748 294 aaKnown RBP eCLIP29.85■■■□□ 2.37
LITAF-220ENST00000620789 PLB1Q6P1J6 1458 aa29.82■■■□□ 2.36
LITAF-220ENST00000620789 ABCA8O94911 1581 aa29.81■■■□□ 2.36
LITAF-220ENST00000620789 FHOD3Q2V2M9 1422 aa29.8■■■□□ 2.36
LITAF-220ENST00000620789 MAPKBP1O60336 1514 aa29.79■■■□□ 2.36
LITAF-220ENST00000620789 TRHP20396 242 aaPredicted RBP29.78■■■□□ 2.36
LITAF-220ENST00000620789 KDM5BQ9UGL1 1544 aa29.75■■■□□ 2.35
LITAF-220ENST00000620789 ARHGAP35Q9NRY4 1499 aa29.74■■■□□ 2.35
LITAF-220ENST00000620789 ZCCHC11Q5TAX3 1644 aaKnown RBP29.7■■■□□ 2.34
LITAF-220ENST00000620789 RAPGEF6Q8TEU7 1601 aa29.67■■■□□ 2.34
LITAF-220ENST00000620789 ASXL2Q76L83 1435 aa29.62■■■□□ 2.33
LITAF-220ENST00000620789 ABCC10Q5T3U5 1492 aa29.62■■■□□ 2.33
LITAF-220ENST00000620789 KIF13AQ9H1H9 1805 aa29.6■■■□□ 2.33
LITAF-220ENST00000620789 CLIP1P30622 1438 aa29.6■■■□□ 2.33
LITAF-220ENST00000620789 FMN1Q68DA7 1419 aa29.59■■■□□ 2.33
LITAF-220ENST00000620789 DIP2BQ9P265 1576 aa29.59■■■□□ 2.33
LITAF-220ENST00000620789 NUP153P49790 1475 aaKnown RBP29.56■■■□□ 2.32
LITAF-220ENST00000620789 LOC105371045A0A1W2PR82 267 aa29.56■■■□□ 2.32
LITAF-220ENST00000620789 ATP10BO94823 1461 aa29.55■■■□□ 2.32
LITAF-220ENST00000620789 ARID3CA6NKF2 412 aa29.52■■■□□ 2.32
LITAF-220ENST00000620789 FAM69CQ0P6D2 419 aa29.52■■■□□ 2.32
LITAF-220ENST00000620789 WDR7Q9Y4E6 1490 aa29.5■■■□□ 2.31
LITAF-220ENST00000620789 CEP162Q5TB80 1403 aa29.49■■■□□ 2.31
LITAF-220ENST00000620789 EPRSP07814 1512 aaKnown RBP29.45■■■□□ 2.31
LITAF-220ENST00000620789 HECW1Q76N89 1606 aa29.45■■■□□ 2.31
LITAF-220ENST00000620789 GLI2P10070 1586 aa29.45■■■□□ 2.31
LITAF-220ENST00000620789 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.41■■■□□ 2.3
LITAF-220ENST00000620789 HNRNPUL2Q1KMD3 747 aaKnown RBP29.41■■■□□ 2.3
LITAF-220ENST00000620789 PCF11O94913 1555 aaKnown RBP29.39■■■□□ 2.29
LITAF-220ENST00000620789 ATP1B4Q9UN42 357 aaPredicted RBP29.38■■■□□ 2.29
LITAF-220ENST00000620789 CASKIN1Q8WXD9 1431 aa29.37■■■□□ 2.29
LITAF-220ENST00000620789 CDK13Q14004 1512 aaKnown RBP29.37■■■□□ 2.29
LITAF-220ENST00000620789 KCNH8Q96L42 1107 aa29.34■■■□□ 2.29
LITAF-220ENST00000620789 MAP3K4Q9Y6R4 1608 aa29.33■■■□□ 2.29
LITAF-220ENST00000620789 FYCO1Q9BQS8 1478 aa29.32■■■□□ 2.28
LITAF-220ENST00000620789 TSPOAP1O95153 1857 aa29.31■■■□□ 2.28
LITAF-220ENST00000620789 LRRIQ1Q96JM4 1722 aa29.31■■■□□ 2.28
LITAF-220ENST00000620789 PLEKHD1A6NEE1 506 aa29.29■■■□□ 2.28
LITAF-220ENST00000620789 CFAP43Q8NDM7 1665 aa29.27■■■□□ 2.28
LITAF-220ENST00000620789 CCDC18Q5T9S5 1454 aa29.26■■■□□ 2.27
LITAF-220ENST00000620789 PPRC1Q5VV67 1664 aaKnown RBP29.25■■■□□ 2.27
LITAF-220ENST00000620789 ABCA9Q8IUA7 1624 aa29.22■■■□□ 2.27
LITAF-220ENST00000620789 CD109Q6YHK3 1445 aa29.2■■■□□ 2.27
LITAF-220ENST00000620789 CDK11AQ9UQ88 783 aaPredicted RBP29.2■■■□□ 2.26
LITAF-220ENST00000620789 TEX14Q8IWB6 1497 aa29.17■■■□□ 2.26
LITAF-220ENST00000620789 MAGI3Q5TCQ9 1506 aa29.16■■■□□ 2.26
LITAF-220ENST00000620789 TROQ12816 1431 aaPredicted RBP29.13■■■□□ 2.25
LITAF-220ENST00000620789 VPS8Q8N3P4 1428 aa29.13■■■□□ 2.25
LITAF-220ENST00000620789 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.11■■■□□ 2.25
LITAF-220ENST00000620789 TTC37Q6PGP7 1564 aa29.09■■■□□ 2.25
LITAF-220ENST00000620789 KDM6BO15054 1643 aa29.09■■■□□ 2.25
LITAF-220ENST00000620789 KIF14Q15058 1648 aa29.08■■■□□ 2.25
LITAF-220ENST00000620789 NEO1Q92859 1461 aa28.96■■■□□ 2.23
LITAF-220ENST00000620789 COL17A1Q9UMD9 1497 aaPredicted RBP28.96■■■□□ 2.23
LITAF-220ENST00000620789 TIAM1Q13009 1591 aa28.95■■■□□ 2.22
LITAF-220ENST00000620789 MYO5CQ9NQX4 1742 aa28.94■■■□□ 2.22
LITAF-220ENST00000620789 MTUS2Q5JR59 1369 aa28.94■■■□□ 2.22
LITAF-220ENST00000620789 PHLDB1Q86UU1 1377 aa28.94■■■□□ 2.22
LITAF-220ENST00000620789 PLCH2O75038 1416 aa28.94■■■□□ 2.22
LITAF-220ENST00000620789 EHBP1L1Q8N3D4 1523 aa28.92■■■□□ 2.22
LITAF-220ENST00000620789 CFAP74Q9C0B2 1584 aa28.92■■■□□ 2.22
LITAF-220ENST00000620789 FANCAO15360 1455 aa28.91■■■□□ 2.22
LITAF-220ENST00000620789 ARAP3Q8WWN8 1544 aa28.91■■■□□ 2.22
LITAF-220ENST00000620789 MAP3K1Q13233 1512 aa28.88■■■□□ 2.21
LITAF-220ENST00000620789 AKNAQ7Z591 1439 aa28.85■■■□□ 2.21
LITAF-220ENST00000620789 PREX2Q70Z35 1606 aa28.84■■■□□ 2.21
LITAF-220ENST00000620789 ARHGAP5Q13017 1502 aa28.83■■■□□ 2.21
LITAF-220ENST00000620789 CDC42BPAQ5VT25 1732 aa28.82■■■□□ 2.2
LITAF-220ENST00000620789 CDC42BPBQ9Y5S2 1711 aa28.82■■■□□ 2.2
LITAF-220ENST00000620789 LRRC9Q6ZRR7 1453 aa28.81■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms