RNA–Protein interactions for RNA: ENST00000620021.4

TMCO3-210, Transcript of transmembrane and coiled-coil domains 3, humanhuman

TSL 4

Gene TMCO3, Length 3,542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO3-210ENST00000620021 FHOD3Q2V2M9 1422 aa19.8■□□□□ 0.76
TMCO3-210ENST00000620021 WDR97A6NE52 1622 aa19.79■□□□□ 0.76
TMCO3-210ENST00000620021 TARBP1Q13395 1621 aaKnown RBP19.78■□□□□ 0.76
TMCO3-210ENST00000620021 ABCA5Q8WWZ7 1642 aa19.77■□□□□ 0.76
TMCO3-210ENST00000620021 ZNF608Q9ULD9 1512 aaPredicted RBP19.77■□□□□ 0.75
TMCO3-210ENST00000620021 ITGAEP38570 1179 aa19.76■□□□□ 0.75
TMCO3-210ENST00000620021 CUL7Q14999 1698 aa19.73■□□□□ 0.75
TMCO3-210ENST00000620021 FBLN2P98095 1184 aa19.65■□□□□ 0.74
TMCO3-210ENST00000620021 ARID3CA6NKF2 412 aa19.64■□□□□ 0.74
TMCO3-210ENST00000620021 WDR62O43379 1518 aa19.62■□□□□ 0.73
TMCO3-210ENST00000620021 CTTNBP2Q8WZ74 1663 aa19.62■□□□□ 0.73
TMCO3-210ENST00000620021 PCF11O94913 1555 aaKnown RBP19.61■□□□□ 0.73
TMCO3-210ENST00000620021 FHAD1B1AJZ9 1412 aa19.61■□□□□ 0.73
TMCO3-210ENST00000620021 IFT140Q96RY7 1462 aa19.6■□□□□ 0.73
TMCO3-210ENST00000620021 PBRM1Q86U86 1689 aa19.59■□□□□ 0.73
TMCO3-210ENST00000620021 GRIN2BQ13224 1484 aa19.59■□□□□ 0.73
TMCO3-210ENST00000620021 TIAM1Q13009 1591 aa19.58■□□□□ 0.72
TMCO3-210ENST00000620021 FAM50AQ14320 339 aaKnown RBP19.56■□□□□ 0.72
TMCO3-210ENST00000620021 LRRC9Q6ZRR7 1453 aa19.55■□□□□ 0.72
TMCO3-210ENST00000620021 CCNB3Q8WWL7 1395 aa19.55■□□□□ 0.72
TMCO3-210ENST00000620021 PHLDB1Q86UU1 1377 aa19.54■□□□□ 0.72
TMCO3-210ENST00000620021 SNAPC4Q5SXM2 1469 aa19.54■□□□□ 0.72
TMCO3-210ENST00000620021 EFCAB5A4FU69 1503 aa19.53■□□□□ 0.72
TMCO3-210ENST00000620021 CHMP7Q8WUX9 453 aaPredicted RBP19.52■□□□□ 0.72
TMCO3-210ENST00000620021 ADAMTS12P58397 1594 aa19.52■□□□□ 0.72
TMCO3-210ENST00000620021 THOC2Q8NI27 1593 aaKnown RBP19.51■□□□□ 0.71
TMCO3-210ENST00000620021 RRBP1Q9P2E9 1410 aaKnown RBP19.51■□□□□ 0.71
TMCO3-210ENST00000620021 CASKIN1Q8WXD9 1431 aa19.5■□□□□ 0.71
TMCO3-210ENST00000620021 FMN1Q68DA7 1419 aa19.5■□□□□ 0.71
TMCO3-210ENST00000620021 EIF4G3O43432 1585 aaKnown RBP19.49■□□□□ 0.71
TMCO3-210ENST00000620021 FYCO1Q9BQS8 1478 aa19.47■□□□□ 0.71
TMCO3-210ENST00000620021 SAMD9Q5K651 1589 aa19.45■□□□□ 0.7
TMCO3-210ENST00000620021 MTUS2Q5JR59 1369 aa19.44■□□□□ 0.7
TMCO3-210ENST00000620021 IQGAP2Q13576 1575 aa19.43■□□□□ 0.7
TMCO3-210ENST00000620021 MAP3K1Q13233 1512 aa19.42■□□□□ 0.7
TMCO3-210ENST00000620021 GRIN2AQ12879 1464 aa19.39■□□□□ 0.7
TMCO3-210ENST00000620021 CFAP43Q8NDM7 1665 aa19.39■□□□□ 0.69
TMCO3-210ENST00000620021 LRRIQ1Q96JM4 1722 aa19.36■□□□□ 0.69
TMCO3-210ENST00000620021 DHX57Q6P158 1386 aaKnown RBP19.35■□□□□ 0.69
TMCO3-210ENST00000620021 KIAA0586Q9BVV6 1533 aa19.33■□□□□ 0.69
TMCO3-210ENST00000620021 RAB3GAP2Q9H2M9 1393 aa19.32■□□□□ 0.68
TMCO3-210ENST00000620021 CDK13Q14004 1512 aaKnown RBP19.31■□□□□ 0.68
TMCO3-210ENST00000620021 JPH4Q96JJ6 628 aa19.31■□□□□ 0.68
TMCO3-210ENST00000620021 SYNJ2O15056 1496 aa19.3■□□□□ 0.68
TMCO3-210ENST00000620021 MAGI1Q96QZ7 1491 aaPredicted RBP19.3■□□□□ 0.68
TMCO3-210ENST00000620021 DISP1Q96F81 1524 aa19.29■□□□□ 0.68
TMCO3-210ENST00000620021 MAGI3Q5TCQ9 1506 aa19.28■□□□□ 0.68
TMCO3-210ENST00000620021 CEP170Q5SW79 1584 aa19.28■□□□□ 0.68
TMCO3-210ENST00000620021 NCOA2Q15596 1464 aa19.27■□□□□ 0.68
TMCO3-210ENST00000620021 UGGT2Q9NYU1 1516 aa19.27■□□□□ 0.67
TMCO3-210ENST00000620021 FGD6Q6ZV73 1430 aa19.25■□□□□ 0.67
TMCO3-210ENST00000620021 EPRSP07814 1512 aaKnown RBP19.25■□□□□ 0.67
TMCO3-210ENST00000620021 CHIC2Q9UKJ5 165 aa19.24■□□□□ 0.67
TMCO3-210ENST00000620021 SETD5Q9C0A6 1442 aa19.22■□□□□ 0.67
TMCO3-210ENST00000620021 KIAA0556O60303 1618 aa19.22■□□□□ 0.67
TMCO3-210ENST00000620021 DIEXFQ68CQ4 756 aaKnown RBP19.2■□□□□ 0.66
TMCO3-210ENST00000620021 PTPRKQ15262 1439 aa19.19■□□□□ 0.66
TMCO3-210ENST00000620021 PLB1Q6P1J6 1458 aa19.19■□□□□ 0.66
TMCO3-210ENST00000620021 HECW1Q76N89 1606 aa19.18■□□□□ 0.66
TMCO3-210ENST00000620021 MYOM3Q5VTT5 1437 aa19.18■□□□□ 0.66
TMCO3-210ENST00000620021 ZNF316A6NFI3 1004 aaPredicted RBP19.18■□□□□ 0.66
TMCO3-210ENST00000620021 NEUROD1Q13562 356 aa19.17■□□□□ 0.66
TMCO3-210ENST00000620021 SIN3AQ96ST3 1273 aa19.17■□□□□ 0.66
TMCO3-210ENST00000620021 RRP7BPQ9NSQ0 103 aa19.17■□□□□ 0.66
TMCO3-210ENST00000620021 CCDC18Q5T9S5 1454 aa19.16■□□□□ 0.66
TMCO3-210ENST00000620021 NUP160Q12769 1436 aa19.16■□□□□ 0.66
TMCO3-210ENST00000620021 NUP153P49790 1475 aaKnown RBP19.15■□□□□ 0.66
TMCO3-210ENST00000620021 EHBP1L1Q8N3D4 1523 aa19.15■□□□□ 0.66
TMCO3-210ENST00000620021 SUPT6HQ7KZ85 1726 aaKnown RBP19.14■□□□□ 0.65
TMCO3-210ENST00000620021 ZNF644Q9H582 1327 aaPredicted RBP19.14■□□□□ 0.65
TMCO3-210ENST00000620021 CARMIL2Q6F5E8 1435 aa19.11■□□□□ 0.65
TMCO3-210ENST00000620021 PRG4Q92954 1404 aaPredicted RBP19.11■□□□□ 0.65
TMCO3-210ENST00000620021 CLSPNQ9HAW4 1339 aa19.09■□□□□ 0.65
TMCO3-210ENST00000620021 ZNF777Q9ULD5 760 aaPredicted RBP19.09■□□□□ 0.65
TMCO3-210ENST00000620021 RAPGEF6Q8TEU7 1601 aa19.08■□□□□ 0.65
TMCO3-210ENST00000620021 CDK11AQ9UQ88 783 aaPredicted RBP19.08■□□□□ 0.64
TMCO3-210ENST00000620021 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.06■□□□□ 0.64
TMCO3-210ENST00000620021 PTPN23Q9H3S7 1636 aa19.06■□□□□ 0.64
TMCO3-210ENST00000620021 MAPKBP1O60336 1514 aa19.06■□□□□ 0.64
TMCO3-210ENST00000620021 ARHGEF11O15085 1522 aa19.05■□□□□ 0.64
TMCO3-210ENST00000620021 PRKCSHP14314 528 aaPredicted RBP19.04■□□□□ 0.64
TMCO3-210ENST00000620021 CHD1O14646 1710 aa19.02■□□□□ 0.63
TMCO3-210ENST00000620021 TRIM52Q96A61 297 aa19■□□□□ 0.63
TMCO3-210ENST00000620021 PTPRGP23470 1445 aa19■□□□□ 0.63
TMCO3-210ENST00000620021 NAIPQ13075 1403 aa19■□□□□ 0.63
TMCO3-210ENST00000620021 CFDP1Q9UEE9 299 aaPredicted RBP18.99■□□□□ 0.63
TMCO3-210ENST00000620021 PLEKHD1A6NEE1 506 aa18.99■□□□□ 0.63
TMCO3-210ENST00000620021 HFM1A2PYH4 1435 aa18.97■□□□□ 0.63
TMCO3-210ENST00000620021 TROQ12816 1431 aaPredicted RBP18.95■□□□□ 0.62
TMCO3-210ENST00000620021 ERCC6L2Q5T890 1561 aa18.94■□□□□ 0.62
TMCO3-210ENST00000620021 ATP10BO94823 1461 aa18.94■□□□□ 0.62
TMCO3-210ENST00000620021 FOXD1Q16676 465 aa18.94■□□□□ 0.62
TMCO3-210ENST00000620021 KIF14Q15058 1648 aa18.93■□□□□ 0.62
TMCO3-210ENST00000620021 MIA2Q96PC5 1412 aa18.92■□□□□ 0.62
TMCO3-210ENST00000620021 TCOF1Q13428 1488 aaKnown RBP18.92■□□□□ 0.62
TMCO3-210ENST00000620021 MIER1Q8N108 512 aa18.91■□□□□ 0.62
TMCO3-210ENST00000620021 HIRIP3Q9BW71 556 aaPredicted RBP18.91■□□□□ 0.62
TMCO3-210ENST00000620021 KDM6BO15054 1643 aa18.89■□□□□ 0.61
TMCO3-210ENST00000620021 ABCA8O94911 1581 aa18.89■□□□□ 0.61
TMCO3-210ENST00000620021 KCNH8Q96L42 1107 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms