RNA–Protein interactions for RNA: ENST00000619438.4

SGMS1-210, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-210ENST00000619438 SHROOM2Q13796 1616 aa35.39■■■■□ 3.26
SGMS1-210ENST00000619438 JPH4Q96JJ6 628 aa35.32■■■■□ 3.24
SGMS1-210ENST00000619438 PRG4Q92954 1404 aaPredicted RBP35.22■■■■□ 3.23
SGMS1-210ENST00000619438 KIAA0586Q9BVV6 1533 aa35.19■■■■□ 3.22
SGMS1-210ENST00000619438 RAPGEF2Q9Y4G8 1499 aa35.18■■■■□ 3.22
SGMS1-210ENST00000619438 CSRNP3Q8WYN3 585 aa35.1■■■■□ 3.21
SGMS1-210ENST00000619438 FAM9AQ8IZU1 332 aaPredicted RBP35.06■■■■□ 3.2
SGMS1-210ENST00000619438 TRHP20396 242 aaPredicted RBP35.03■■■■□ 3.2
SGMS1-210ENST00000619438 EEA1Q15075 1411 aa34.99■■■■□ 3.19
SGMS1-210ENST00000619438 IQGAP2Q13576 1575 aa34.99■■■■□ 3.19
SGMS1-210ENST00000619438 PRXQ9BXM0 1461 aa34.98■■■■□ 3.19
SGMS1-210ENST00000619438 CARMIL2Q6F5E8 1435 aa34.9■■■■□ 3.18
SGMS1-210ENST00000619438 TTBK1Q5TCY1 1321 aaPredicted RBP34.89■■■■□ 3.18
SGMS1-210ENST00000619438 CTTNBP2Q8WZ74 1663 aa34.84■■■■□ 3.17
SGMS1-210ENST00000619438 PTPRGP23470 1445 aa34.78■■■■□ 3.16
SGMS1-210ENST00000619438 TNIKQ9UKE5 1360 aa34.76■■■■□ 3.16
SGMS1-210ENST00000619438 DISP1Q96F81 1524 aa34.75■■■■□ 3.15
SGMS1-210ENST00000619438 ADCY10Q96PN6 1610 aa34.75■■■■□ 3.15
SGMS1-210ENST00000619438 NPM1P06748 294 aaKnown RBP eCLIP34.75■■■■□ 3.15
SGMS1-210ENST00000619438 UGGT2Q9NYU1 1516 aa34.75■■■■□ 3.15
SGMS1-210ENST00000619438 EHMT2Q96KQ7 1210 aa34.66■■■■□ 3.14
SGMS1-210ENST00000619438 KIAA0556O60303 1618 aa34.66■■■■□ 3.14
SGMS1-210ENST00000619438 GOLGA3Q08378 1498 aa34.61■■■■□ 3.13
SGMS1-210ENST00000619438 RANGAP1P46060 587 aaPredicted RBP34.59■■■■□ 3.13
SGMS1-210ENST00000619438 UBTFP17480 764 aaKnown RBP34.57■■■■□ 3.12
SGMS1-210ENST00000619438 KIF13AQ9H1H9 1805 aa34.56■■■■□ 3.12
SGMS1-210ENST00000619438 LOC105371045A0A1W2PR82 267 aa34.55■■■■□ 3.12
SGMS1-210ENST00000619438 P3H3Q8IVL6 736 aa34.54■■■■□ 3.12
SGMS1-210ENST00000619438 KIF21BO75037 1637 aa34.54■■■■□ 3.12
SGMS1-210ENST00000619438 MAPKBP1O60336 1514 aa34.54■■■■□ 3.12
SGMS1-210ENST00000619438 UACAQ9BZF9 1416 aa34.5■■■■□ 3.11
SGMS1-210ENST00000619438 ABCC2Q92887 1545 aa34.47■■■■□ 3.11
SGMS1-210ENST00000619438 UHRF1BP1LA0JNW5 1464 aa34.46■■■■□ 3.11
SGMS1-210ENST00000619438 ABCC10Q5T3U5 1492 aa34.43■■■■□ 3.1
SGMS1-210ENST00000619438 FAM69CQ0P6D2 419 aa34.39■■■■□ 3.1
SGMS1-210ENST00000619438 DIP2BQ9P265 1576 aa34.39■■■■□ 3.1
SGMS1-210ENST00000619438 PLB1Q6P1J6 1458 aa34.35■■■■□ 3.09
SGMS1-210ENST00000619438 SAMD9Q5K651 1589 aa34.32■■■■□ 3.09
SGMS1-210ENST00000619438 KDM5BQ9UGL1 1544 aa34.32■■■■□ 3.08
SGMS1-210ENST00000619438 ZCCHC11Q5TAX3 1644 aaKnown RBP34.31■■■■□ 3.08
SGMS1-210ENST00000619438 ASXL2Q76L83 1435 aa34.3■■■■□ 3.08
SGMS1-210ENST00000619438 ABCA8O94911 1581 aa34.28■■■■□ 3.08
SGMS1-210ENST00000619438 TSPOAP1O95153 1857 aa34.22■■■■□ 3.07
SGMS1-210ENST00000619438 FHOD3Q2V2M9 1422 aa34.21■■■■□ 3.07
SGMS1-210ENST00000619438 ARID3CA6NKF2 412 aa34.19■■■■□ 3.06
SGMS1-210ENST00000619438 EFCAB5A4FU69 1503 aa34.16■■■■□ 3.06
SGMS1-210ENST00000619438 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.11■■■■□ 3.05
SGMS1-210ENST00000619438 HNRNPUL2Q1KMD3 747 aaKnown RBP34.11■■■■□ 3.05
SGMS1-210ENST00000619438 GLI2P10070 1586 aa34.11■■■■□ 3.05
SGMS1-210ENST00000619438 EPRSP07814 1512 aaKnown RBP34.09■■■■□ 3.05
SGMS1-210ENST00000619438 RAPGEF6Q8TEU7 1601 aa34.07■■■■□ 3.05
SGMS1-210ENST00000619438 WDR7Q9Y4E6 1490 aa34.06■■■■□ 3.04
SGMS1-210ENST00000619438 KCNH8Q96L42 1107 aa34.06■■■■□ 3.04
SGMS1-210ENST00000619438 ATP10BO94823 1461 aa34.02■■■■□ 3.04
SGMS1-210ENST00000619438 ARHGAP35Q9NRY4 1499 aa34.01■■■■□ 3.04
SGMS1-210ENST00000619438 PPRC1Q5VV67 1664 aaKnown RBP34.01■■■■□ 3.03
SGMS1-210ENST00000619438 ATP1B4Q9UN42 357 aaPredicted RBP34■■■■□ 3.03
SGMS1-210ENST00000619438 MAP3K4Q9Y6R4 1608 aa34■■■■□ 3.03
SGMS1-210ENST00000619438 FMN1Q68DA7 1419 aa33.94■■■■□ 3.02
SGMS1-210ENST00000619438 KDM6BO15054 1643 aa33.94■■■■□ 3.02
SGMS1-210ENST00000619438 NUP153P49790 1475 aaKnown RBP33.93■■■■□ 3.02
SGMS1-210ENST00000619438 PLEKHD1A6NEE1 506 aa33.87■■■■□ 3.01
SGMS1-210ENST00000619438 CLIP1P30622 1438 aa33.85■■■■□ 3.01
SGMS1-210ENST00000619438 CFAP43Q8NDM7 1665 aa33.84■■■■□ 3.01
SGMS1-210ENST00000619438 TEX14Q8IWB6 1497 aa33.8■■■■□ 3
SGMS1-210ENST00000619438 CD109Q6YHK3 1445 aa33.79■■■■□ 3
SGMS1-210ENST00000619438 PCGF6Q9BYE7 350 aa33.77■■■■□ 3
SGMS1-210ENST00000619438 CDK11AQ9UQ88 783 aaPredicted RBP33.71■■■□□ 2.99
SGMS1-210ENST00000619438 MAGI3Q5TCQ9 1506 aa33.71■■■□□ 2.99
SGMS1-210ENST00000619438 HECW1Q76N89 1606 aa33.7■■■□□ 2.99
SGMS1-210ENST00000619438 ABCA9Q8IUA7 1624 aa33.7■■■□□ 2.99
SGMS1-210ENST00000619438 CDK13Q14004 1512 aaKnown RBP33.7■■■□□ 2.99
SGMS1-210ENST00000619438 COL17A1Q9UMD9 1497 aaPredicted RBP33.69■■■□□ 2.98
SGMS1-210ENST00000619438 TRIM26Q12899 539 aaPredicted RBP33.66■■■□□ 2.98
SGMS1-210ENST00000619438 CEP162Q5TB80 1403 aa33.65■■■□□ 2.98
SGMS1-210ENST00000619438 CASKIN1Q8WXD9 1431 aa33.63■■■□□ 2.97
SGMS1-210ENST00000619438 LRRIQ1Q96JM4 1722 aa33.59■■■□□ 2.97
SGMS1-210ENST00000619438 PCF11O94913 1555 aaKnown RBP33.55■■■□□ 2.96
SGMS1-210ENST00000619438 HRCP23327 699 aa33.52■■■□□ 2.96
SGMS1-210ENST00000619438 FYCO1Q9BQS8 1478 aa33.51■■■□□ 2.96
SGMS1-210ENST00000619438 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.51■■■□□ 2.957e-9■■■□□ 17.9
SGMS1-210ENST00000619438 CCDC18Q5T9S5 1454 aa33.5■■■□□ 2.95
SGMS1-210ENST00000619438 TTC37Q6PGP7 1564 aa33.48■■■□□ 2.95
SGMS1-210ENST00000619438 AEBP2Q6ZN18 517 aaPredicted RBP33.45■■■□□ 2.95
SGMS1-210ENST00000619438 TROQ12816 1431 aaPredicted RBP33.45■■■□□ 2.94
SGMS1-210ENST00000619438 ARAP3Q8WWN8 1544 aa33.44■■■□□ 2.94
SGMS1-210ENST00000619438 PHLDB1Q86UU1 1377 aa33.44■■■□□ 2.94
SGMS1-210ENST00000619438 NEO1Q92859 1461 aa33.41■■■□□ 2.94
SGMS1-210ENST00000619438 KIF14Q15058 1648 aa33.38■■■□□ 2.93
SGMS1-210ENST00000619438 FANCAO15360 1455 aa33.34■■■□□ 2.93
SGMS1-210ENST00000619438 CFAP74Q9C0B2 1584 aa33.32■■■□□ 2.92
SGMS1-210ENST00000619438 PLCH2O75038 1416 aa33.32■■■□□ 2.92
SGMS1-210ENST00000619438 RAPGEF3O95398 923 aa33.32■■■□□ 2.92
SGMS1-210ENST00000619438 MYO5CQ9NQX4 1742 aa33.31■■■□□ 2.92
SGMS1-210ENST00000619438 EFCAB2Q5VUJ9 269 aa33.3■■■□□ 2.92
SGMS1-210ENST00000619438 AKNAQ7Z591 1439 aa33.29■■■□□ 2.92
SGMS1-210ENST00000619438 KDM4FA0A1W2PPD8 638 aa33.29■■■□□ 2.92
SGMS1-210ENST00000619438 MTUS2Q5JR59 1369 aa33.26■■■□□ 2.91
SGMS1-210ENST00000619438 FRMPD1Q5SYB0 1578 aa33.25■■■□□ 2.91
SGMS1-210ENST00000619438 VPS8Q8N3P4 1428 aa33.24■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms