RNA–Protein interactions for RNA: ENST00000618562.1

VEGFC-202, Transcript of vascular endothelial growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VEGFC, Length 2,064 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFC-202ENST00000618562 GRIN2BQ13224 1484 aa39.19■■■■□ 3.86
VEGFC-202ENST00000618562 ADAMTS12P58397 1594 aa39.15■■■■□ 3.86
VEGFC-202ENST00000618562 EIF4G3O43432 1585 aaKnown RBP39.13■■■■□ 3.85
VEGFC-202ENST00000618562 FHAD1B1AJZ9 1412 aa39.12■■■■□ 3.85
VEGFC-202ENST00000618562 TTBK1Q5TCY1 1321 aaPredicted RBP39.07■■■■□ 3.84
VEGFC-202ENST00000618562 EFCAB5A4FU69 1503 aa38.97■■■■□ 3.83
VEGFC-202ENST00000618562 APLP2Q06481 763 aa38.96■■■■□ 3.83
VEGFC-202ENST00000618562 SNAPC4Q5SXM2 1469 aa38.94■■■■□ 3.82
VEGFC-202ENST00000618562 P3H3Q8IVL6 736 aa38.83■■■■□ 3.81
VEGFC-202ENST00000618562 FHOD3Q2V2M9 1422 aa38.83■■■■□ 3.81
VEGFC-202ENST00000618562 MAGI1Q96QZ7 1491 aaPredicted RBP38.83■■■■□ 3.81
VEGFC-202ENST00000618562 SAMD9Q5K651 1589 aa38.82■■■■□ 3.81
VEGFC-202ENST00000618562 IQGAP2Q13576 1575 aa38.75■■■■□ 3.79
VEGFC-202ENST00000618562 GRIN2AQ12879 1464 aa38.75■■■■□ 3.79
VEGFC-202ENST00000618562 PCF11O94913 1555 aaKnown RBP38.72■■■■□ 3.79
VEGFC-202ENST00000618562 KANK4Q5T7N3 995 aaPredicted RBP38.69■■■■□ 3.78
VEGFC-202ENST00000618562 SYNJ2O15056 1496 aa38.69■■■■□ 3.78
VEGFC-202ENST00000618562 MAP3K1Q13233 1512 aa38.65■■■■□ 3.78
VEGFC-202ENST00000618562 TIAM1Q13009 1591 aa38.63■■■■□ 3.78
VEGFC-202ENST00000618562 FMN1Q68DA7 1419 aa38.61■■■■□ 3.77
VEGFC-202ENST00000618562 FYCO1Q9BQS8 1478 aa38.6■■■■□ 3.77
VEGFC-202ENST00000618562 KIAA0586Q9BVV6 1533 aa38.6■■■■□ 3.77
VEGFC-202ENST00000618562 CASKIN1Q8WXD9 1431 aa38.59■■■■□ 3.77
VEGFC-202ENST00000618562 CHMP7Q8WUX9 453 aaPredicted RBP38.58■■■■□ 3.77
VEGFC-202ENST00000618562 UGGT2Q9NYU1 1516 aa38.56■■■■□ 3.76
VEGFC-202ENST00000618562 CFAP43Q8NDM7 1665 aa38.54■■■■□ 3.76
VEGFC-202ENST00000618562 CEP170Q5SW79 1584 aa38.54■■■■□ 3.76
VEGFC-202ENST00000618562 FBLN2P98095 1184 aa38.47■■■■□ 3.75
VEGFC-202ENST00000618562 LRRC9Q6ZRR7 1453 aa38.44■■■■□ 3.74
VEGFC-202ENST00000618562 NUP160Q12769 1436 aa38.44■■■■□ 3.74
VEGFC-202ENST00000618562 ATP1B4Q9UN42 357 aaPredicted RBP38.43■■■■□ 3.74
VEGFC-202ENST00000618562 DISP1Q96F81 1524 aa38.38■■■■□ 3.73
VEGFC-202ENST00000618562 KIAA0556O60303 1618 aa38.37■■■■□ 3.73
VEGFC-202ENST00000618562 LRRIQ1Q96JM4 1722 aa38.37■■■■□ 3.73
VEGFC-202ENST00000618562 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP38.34■■■■□ 3.73
VEGFC-202ENST00000618562 CCER1Q8TC90 406 aaPredicted RBP38.33■■■■□ 3.73
VEGFC-202ENST00000618562 RRBP1Q9P2E9 1410 aaKnown RBP38.29■■■■□ 3.72
VEGFC-202ENST00000618562 CHD1O14646 1710 aa38.25■■■■□ 3.71
VEGFC-202ENST00000618562 HECW1Q76N89 1606 aa38.21■■■■□ 3.71
VEGFC-202ENST00000618562 HNRNPUL2Q1KMD3 747 aaKnown RBP38.21■■■■□ 3.71
VEGFC-202ENST00000618562 JPH4Q96JJ6 628 aa38.16■■■■□ 3.7
VEGFC-202ENST00000618562 PHLDB1Q86UU1 1377 aa38.14■■■■□ 3.7
VEGFC-202ENST00000618562 CCNB3Q8WWL7 1395 aa38.14■■■■□ 3.7
VEGFC-202ENST00000618562 CCDC18Q5T9S5 1454 aa38.13■■■■□ 3.69
VEGFC-202ENST00000618562 EPRSP07814 1512 aaKnown RBP38.08■■■■□ 3.69
VEGFC-202ENST00000618562 CARMIL2Q6F5E8 1435 aa38.07■■■■□ 3.69
VEGFC-202ENST00000618562 MTUS2Q5JR59 1369 aa38.07■■■■□ 3.69
VEGFC-202ENST00000618562 RAPGEF6Q8TEU7 1601 aa38.03■■■■□ 3.68
VEGFC-202ENST00000618562 MAGI3Q5TCQ9 1506 aa38.02■■■■□ 3.68
VEGFC-202ENST00000618562 EHBP1L1Q8N3D4 1523 aa38.02■■■■□ 3.68
VEGFC-202ENST00000618562 CDK13Q14004 1512 aaKnown RBP38.01■■■■□ 3.67
VEGFC-202ENST00000618562 NUP153P49790 1475 aaKnown RBP37.96■■■■□ 3.67
VEGFC-202ENST00000618562 SUPT6HQ7KZ85 1726 aaKnown RBP37.95■■■■□ 3.66
VEGFC-202ENST00000618562 NCOA2Q15596 1464 aa37.91■■■■□ 3.66
VEGFC-202ENST00000618562 PRG4Q92954 1404 aaPredicted RBP37.9■■■■□ 3.66
VEGFC-202ENST00000618562 SHROOM2Q13796 1616 aa37.9■■■■□ 3.66
VEGFC-202ENST00000618562 PLB1Q6P1J6 1458 aa37.9■■■■□ 3.66
VEGFC-202ENST00000618562 ARID3CA6NKF2 412 aa37.87■■■■□ 3.65
VEGFC-202ENST00000618562 ARHGEF11O15085 1522 aa37.86■■■■□ 3.65
VEGFC-202ENST00000618562 FGD6Q6ZV73 1430 aa37.82■■■■□ 3.64
VEGFC-202ENST00000618562 ABCA8O94911 1581 aa37.79■■■■□ 3.64
VEGFC-202ENST00000618562 FAM50AQ14320 339 aaKnown RBP37.78■■■■□ 3.64
VEGFC-202ENST00000618562 MYOM3Q5VTT5 1437 aa37.78■■■■□ 3.64
VEGFC-202ENST00000618562 CLASP1Q7Z460 1538 aa37.77■■■■□ 3.64
VEGFC-202ENST00000618562 ITGAEP38570 1179 aa37.77■■■■□ 3.64
VEGFC-202ENST00000618562 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP37.77■■■■□ 3.64
VEGFC-202ENST00000618562 PTPRGP23470 1445 aa37.69■■■■□ 3.62
VEGFC-202ENST00000618562 ERCC6L2Q5T890 1561 aa37.66■■■■□ 3.62
VEGFC-202ENST00000618562 CDK11AQ9UQ88 783 aaPredicted RBP37.62■■■■□ 3.61
VEGFC-202ENST00000618562 PTPN23Q9H3S7 1636 aa37.61■■■■□ 3.61
VEGFC-202ENST00000618562 TROQ12816 1431 aaPredicted RBP37.58■■■■□ 3.61
VEGFC-202ENST00000618562 ATP10BO94823 1461 aa37.56■■■■□ 3.6
VEGFC-202ENST00000618562 TCOF1Q13428 1488 aaKnown RBP37.53■■■■□ 3.6
VEGFC-202ENST00000618562 ADCY10Q96PN6 1610 aa37.51■■■■□ 3.6
VEGFC-202ENST00000618562 MIA2Q96PC5 1412 aa37.51■■■■□ 3.59
VEGFC-202ENST00000618562 DHX57Q6P158 1386 aaKnown RBP37.49■■■■□ 3.59
VEGFC-202ENST00000618562 RAB3GAP2Q9H2M9 1393 aa37.49■■■■□ 3.59
VEGFC-202ENST00000618562 UACAQ9BZF9 1416 aa37.48■■■■□ 3.59
VEGFC-202ENST00000618562 SETD5Q9C0A6 1442 aa37.48■■■■□ 3.59
VEGFC-202ENST00000618562 KIF14Q15058 1648 aa37.46■■■■□ 3.59
VEGFC-202ENST00000618562 PTPRKQ15262 1439 aa37.45■■■■□ 3.59
VEGFC-202ENST00000618562 DIEXFQ68CQ4 756 aaKnown RBP37.38■■■■□ 3.58
VEGFC-202ENST00000618562 ABCC2Q92887 1545 aa37.37■■■■□ 3.57
VEGFC-202ENST00000618562 PLEKHD1A6NEE1 506 aa37.37■■■■□ 3.57
VEGFC-202ENST00000618562 ITSN2Q9NZM3 1697 aa37.33■■■■□ 3.57
VEGFC-202ENST00000618562 CLSPNQ9HAW4 1339 aa37.33■■■■□ 3.57
VEGFC-202ENST00000618562 GPATCH8Q9UKJ3 1502 aaKnown RBP37.3■■■■□ 3.56
VEGFC-202ENST00000618562 ZNF316A6NFI3 1004 aaPredicted RBP37.3■■■■□ 3.56
VEGFC-202ENST00000618562 HFM1A2PYH4 1435 aa37.28■■■■□ 3.56
VEGFC-202ENST00000618562 ABCC10Q5T3U5 1492 aa37.27■■■■□ 3.56
VEGFC-202ENST00000618562 CDC42BPAQ5VT25 1732 aa37.23■■■■□ 3.55
VEGFC-202ENST00000618562 UHRF1BP1LA0JNW5 1464 aa37.23■■■■□ 3.55
VEGFC-202ENST00000618562 ZNF644Q9H582 1327 aaPredicted RBP37.21■■■■□ 3.55
VEGFC-202ENST00000618562 OSCARQ8IYS5 282 aa37.21■■■■□ 3.55
VEGFC-202ENST00000618562 NAIPQ13075 1403 aa37.2■■■■□ 3.55
VEGFC-202ENST00000618562 DNMT1P26358 1616 aaKnown RBP37.19■■■■□ 3.54
VEGFC-202ENST00000618562 CFDP1Q9UEE9 299 aaPredicted RBP37.18■■■■□ 3.54
VEGFC-202ENST00000618562 CAMSAP2Q08AD1 1489 aa37.17■■■■□ 3.54
VEGFC-202ENST00000618562 DAPK1P53355 1430 aa37.15■■■■□ 3.54
VEGFC-202ENST00000618562 ZCCHC11Q5TAX3 1644 aaKnown RBP37.15■■■■□ 3.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms