RNA–Protein interactions for RNA: ENST00000617022.4

DDB2-212, Transcript of damage specific DNA binding protein 2, humanhuman

TSL 2

Gene DDB2, Length 2,181 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB2-212ENST00000617022 GRIN2AQ12879 1464 aa25.24■■□□□ 1.63
DDB2-212ENST00000617022 FBLN2P98095 1184 aa25.24■■□□□ 1.63
DDB2-212ENST00000617022 CHMP7Q8WUX9 453 aaPredicted RBP25.24■■□□□ 1.63
DDB2-212ENST00000617022 ARHGAP35Q9NRY4 1499 aa25.14■■□□□ 1.61
DDB2-212ENST00000617022 CEP170Q5SW79 1584 aa25.1■■□□□ 1.61
DDB2-212ENST00000617022 ARAP1Q96P48 1450 aa25.1■■□□□ 1.61
DDB2-212ENST00000617022 IQGAP2Q13576 1575 aa25.09■■□□□ 1.61
DDB2-212ENST00000617022 CHD1O14646 1710 aa25.09■■□□□ 1.61
DDB2-212ENST00000617022 KIAA0586Q9BVV6 1533 aa25.06■■□□□ 1.6
DDB2-212ENST00000617022 NUP160Q12769 1436 aa25.06■■□□□ 1.6
DDB2-212ENST00000617022 P3H3Q8IVL6 736 aa25.04■■□□□ 1.6
DDB2-212ENST00000617022 VPS8Q8N3P4 1428 aa25.03■■□□□ 1.6
DDB2-212ENST00000617022 EFCAB5A4FU69 1503 aa25.02■■□□□ 1.6
DDB2-212ENST00000617022 SAMD9Q5K651 1589 aa24.98■■□□□ 1.59
DDB2-212ENST00000617022 FHOD3Q2V2M9 1422 aa24.98■■□□□ 1.59
DDB2-212ENST00000617022 PELP1Q8IZL8 1130 aaKnown RBP24.97■■□□□ 1.59
DDB2-212ENST00000617022 UGGT2Q9NYU1 1516 aa24.95■■□□□ 1.58
DDB2-212ENST00000617022 PPARGC1BQ86YN6 1023 aaKnown RBP24.88■■□□□ 1.57
DDB2-212ENST00000617022 JPH4Q96JJ6 628 aa24.87■■□□□ 1.57
DDB2-212ENST00000617022 DISP1Q96F81 1524 aa24.86■■□□□ 1.57
DDB2-212ENST00000617022 KIAA0556O60303 1618 aa24.85■■□□□ 1.57
DDB2-212ENST00000617022 FMN1Q68DA7 1419 aa24.8■■□□□ 1.56
DDB2-212ENST00000617022 PCF11O94913 1555 aaKnown RBP24.8■■□□□ 1.56
DDB2-212ENST00000617022 CLASP1Q7Z460 1538 aa24.78■■□□□ 1.56
DDB2-212ENST00000617022 APLP2Q06481 763 aa24.78■■□□□ 1.56
DDB2-212ENST00000617022 TTBK1Q5TCY1 1321 aaPredicted RBP24.76■■□□□ 1.55
DDB2-212ENST00000617022 CARMIL2Q6F5E8 1435 aa24.76■■□□□ 1.55
DDB2-212ENST00000617022 PRG4Q92954 1404 aaPredicted RBP24.75■■□□□ 1.55
DDB2-212ENST00000617022 ATP1B4Q9UN42 357 aaPredicted RBP24.74■■□□□ 1.55
DDB2-212ENST00000617022 SHROOM2Q13796 1616 aa24.74■■□□□ 1.55
DDB2-212ENST00000617022 CASKIN1Q8WXD9 1431 aa24.73■■□□□ 1.55
DDB2-212ENST00000617022 FYCO1Q9BQS8 1478 aa24.71■■□□□ 1.55
DDB2-212ENST00000617022 OSCARQ8IYS5 282 aa24.67■■□□□ 1.54
DDB2-212ENST00000617022 ERCC6L2Q5T890 1561 aa24.64■■□□□ 1.54
DDB2-212ENST00000617022 PCGF6Q9BYE7 350 aa24.64■■□□□ 1.53
DDB2-212ENST00000617022 TIAM1Q13009 1591 aa24.63■■□□□ 1.53
DDB2-212ENST00000617022 KANK4Q5T7N3 995 aaPredicted RBP24.63■■□□□ 1.53
DDB2-212ENST00000617022 LRRIQ1Q96JM4 1722 aa24.59■■□□□ 1.53
DDB2-212ENST00000617022 MAP3K1Q13233 1512 aa24.59■■□□□ 1.53
DDB2-212ENST00000617022 CFAP43Q8NDM7 1665 aa24.59■■□□□ 1.53
DDB2-212ENST00000617022 HECW1Q76N89 1606 aa24.58■■□□□ 1.53
DDB2-212ENST00000617022 TRIM26Q12899 539 aaPredicted RBP24.57■■□□□ 1.52
DDB2-212ENST00000617022 PLB1Q6P1J6 1458 aa24.57■■□□□ 1.52
DDB2-212ENST00000617022 RAPGEF6Q8TEU7 1601 aa24.57■■□□□ 1.52
DDB2-212ENST00000617022 PTPRGP23470 1445 aa24.55■■□□□ 1.52
DDB2-212ENST00000617022 ARID3CA6NKF2 412 aa24.54■■□□□ 1.52
DDB2-212ENST00000617022 LRRC9Q6ZRR7 1453 aa24.52■■□□□ 1.52
DDB2-212ENST00000617022 EPRSP07814 1512 aaKnown RBP24.51■■□□□ 1.51
DDB2-212ENST00000617022 NUP153P49790 1475 aaKnown RBP24.51■■□□□ 1.51
DDB2-212ENST00000617022 CCDC18Q5T9S5 1454 aa24.49■■□□□ 1.51
DDB2-212ENST00000617022 CDK13Q14004 1512 aaKnown RBP24.49■■□□□ 1.51
DDB2-212ENST00000617022 ABCA8O94911 1581 aa24.49■■□□□ 1.51
DDB2-212ENST00000617022 MTUS2Q5JR59 1369 aa24.42■■□□□ 1.5
DDB2-212ENST00000617022 UACAQ9BZF9 1416 aa24.41■■□□□ 1.5
DDB2-212ENST00000617022 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.4■■□□□ 1.5
DDB2-212ENST00000617022 HNRNPUL2Q1KMD3 747 aaKnown RBP24.4■■□□□ 1.5
DDB2-212ENST00000617022 MAGI3Q5TCQ9 1506 aa24.4■■□□□ 1.5
DDB2-212ENST00000617022 EHBP1L1Q8N3D4 1523 aa24.36■■□□□ 1.49
DDB2-212ENST00000617022 ABCC2Q92887 1545 aa24.33■■□□□ 1.49
DDB2-212ENST00000617022 ATP10BO94823 1461 aa24.33■■□□□ 1.49
DDB2-212ENST00000617022 PHLDB1Q86UU1 1377 aa24.31■■□□□ 1.48
DDB2-212ENST00000617022 CDK11AQ9UQ88 783 aaPredicted RBP24.29■■□□□ 1.48
DDB2-212ENST00000617022 ARHGEF11O15085 1522 aa24.28■■□□□ 1.48
DDB2-212ENST00000617022 SUPT6HQ7KZ85 1726 aaKnown RBP24.28■■□□□ 1.48
DDB2-212ENST00000617022 NCOA2Q15596 1464 aa24.27■■□□□ 1.48
DDB2-212ENST00000617022 UHRF1BP1LA0JNW5 1464 aa24.26■■□□□ 1.47
DDB2-212ENST00000617022 TROQ12816 1431 aaPredicted RBP24.23■■□□□ 1.47
DDB2-212ENST00000617022 RRBP1Q9P2E9 1410 aaKnown RBP24.23■■□□□ 1.47
DDB2-212ENST00000617022 ADCY10Q96PN6 1610 aa24.23■■□□□ 1.47
DDB2-212ENST00000617022 PLEKHD1A6NEE1 506 aa24.21■■□□□ 1.47
DDB2-212ENST00000617022 CCNB3Q8WWL7 1395 aa24.19■■□□□ 1.46
DDB2-212ENST00000617022 ZCCHC11Q5TAX3 1644 aaKnown RBP24.19■■□□□ 1.46
DDB2-212ENST00000617022 KDM5BQ9UGL1 1544 aa24.18■■□□□ 1.46
DDB2-212ENST00000617022 RIMBP3CA6NJZ7 1639 aa24.17■■□□□ 1.46
DDB2-212ENST00000617022 RIMBP3BA6NNM3 1639 aa24.17■■□□□ 1.46
DDB2-212ENST00000617022 RIMBP3Q9UFD9 1639 aa24.17■■□□□ 1.46
DDB2-212ENST00000617022 KIF14Q15058 1648 aa24.16■■□□□ 1.46
DDB2-212ENST00000617022 MYOM3Q5VTT5 1437 aa24.15■■□□□ 1.46
DDB2-212ENST00000617022 MYT1Q01538 1121 aa24.14■■□□□ 1.45
DDB2-212ENST00000617022 FGD6Q6ZV73 1430 aa24.13■■□□□ 1.45
DDB2-212ENST00000617022 FAM50AQ14320 339 aaKnown RBP24.1■■□□□ 1.45
DDB2-212ENST00000617022 CYB5RLQ6IPT4 315 aa24.08■■□□□ 1.45
DDB2-212ENST00000617022 SCAF1Q9H7N4 1312 aaKnown RBP24.05■■□□□ 1.44
DDB2-212ENST00000617022 ITGAEP38570 1179 aa24.04■■□□□ 1.44
DDB2-212ENST00000617022 ABCC10Q5T3U5 1492 aa24.04■■□□□ 1.44
DDB2-212ENST00000617022 KCNH8Q96L42 1107 aa24.03■■□□□ 1.44
DDB2-212ENST00000617022 PTPN23Q9H3S7 1636 aa24.02■■□□□ 1.44
DDB2-212ENST00000617022 ZEB1P37275 1124 aaPredicted RBP24.02■■□□□ 1.44
DDB2-212ENST00000617022 NPM1P06748 294 aaKnown RBP eCLIP24.01■■□□□ 1.43
DDB2-212ENST00000617022 GPATCH8Q9UKJ3 1502 aaKnown RBP24.01■■□□□ 1.43
DDB2-212ENST00000617022 MIA2Q96PC5 1412 aa24.01■■□□□ 1.43
DDB2-212ENST00000617022 ITSN2Q9NZM3 1697 aa23.99■■□□□ 1.43
DDB2-212ENST00000617022 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.99■■□□□ 1.43
DDB2-212ENST00000617022 WDR7Q9Y4E6 1490 aa23.98■■□□□ 1.43
DDB2-212ENST00000617022 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.97■■□□□ 1.43
DDB2-212ENST00000617022 ASXL2Q76L83 1435 aa23.97■■□□□ 1.43
DDB2-212ENST00000617022 CDC42BPAQ5VT25 1732 aa23.97■■□□□ 1.43
DDB2-212ENST00000617022 TTC37Q6PGP7 1564 aa23.96■■□□□ 1.43
DDB2-212ENST00000617022 TCOF1Q13428 1488 aaKnown RBP23.96■■□□□ 1.43
DDB2-212ENST00000617022 CFDP1Q9UEE9 299 aaPredicted RBP23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms